Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_31905 Sequoiadendron giganteum HOM05D006139 ORTHO05D007681 1.7e-44 182.2 88 100.0
ATR0609G005 Amborella trichopoda HOM05D006139 ORTHO05D007681 1.2e-24 116.3 73 68.5
Oeu013397.2 Olea europaea HOM05D006139 ORTHO05D007681 1.7e-23 112.5 73 67.1
Rhsim07G0086500 Rhododendron simsii HOM05D006139 ORTHO05D007681 1.7e-23 112.5 74 67.6
Duzib213G0841 Durio zibethinus HOM05D006139 ORTHO05D007681 2.9e-23 111.7 73 67.1
Thecc.07G123700 Theobroma cacao HOM05D006139 ORTHO05D007681 2.9e-23 111.7 73 67.1
vmacro13984 Vaccinium macrocarpon HOM05D006139 ORTHO05D007681 2.9e-23 111.7 74 66.2
Hma1.2p1_0412F.1_g147150 Hydrangea macrophylla HOM05D006139 ORTHO05D007681 3.8e-23 111.3 74 64.9
CSS0045945 Camellia sinensis var. sinensis HOM05D006139 ORTHO05D007681 8.4e-23 110.2 74 66.2
FAN12G0395 Fragaria x ananassa HOM05D006139 ORTHO05D007681 8.4e-23 110.2 73 63.0
Lsat_1_v5_gn_3_24941 Lactuca sativa HOM05D006139 ORTHO05D007681 8.4e-23 110.2 73 64.4
QL10p044141 Quercus lobata HOM05D006139 ORTHO05D007681 8.4e-23 110.2 73 64.4
TWI38G2388 Tripterygium wilfordii HOM05D006139 ORTHO05D007681 8.4e-23 110.2 74 64.9
HPP92_015930 Vanilla planifolia HOM05D006139 ORTHO05D007681 8.4e-23 110.2 73 67.1
ECA246G3778 Erigeron canadensis HOM05D006139 ORTHO05D007681 1.1e-22 109.8 74 64.9
Sed0017452 Sechium edule HOM05D006139 ORTHO05D007681 1.1e-22 109.8 73 67.1
PSO017G2886 Papaver somniferum HOM05D006139 ORTHO05D007681 1.9e-22 109.0 70 72.9
CANSAT11G1108 Cannabis sativa HOM05D006139 ORTHO05D007681 2.5e-22 108.6 74 63.5
Aqoxy2G03950 Aquilegia oxysepala HOM05D006139 ORTHO05D007681 3.2e-22 108.2 74 66.2
Manes.03G099000 Manihot esculenta HOM05D006139 ORTHO05D007681 3.2e-22 108.2 74 63.5
Dinv44237 Davidia involucrata HOM05D006139 ORTHO05D007681 4.2e-22 107.8 74 62.2
PSO675G6876 Papaver somniferum HOM05D006139 ORTHO05D007681 4.2e-22 107.8 70 72.9
Sopen09g036170 Solanum pennellii HOM05D006139 ORTHO05D007681 4.2e-22 107.8 74 62.2
MSTRG.17865 Avicennia marina HOM05D006139 ORTHO05D007681 5.5e-22 107.5 74 63.5
Cc03_g10570 Coffea canephora HOM05D006139 ORTHO05D007681 5.5e-22 107.5 74 63.5
FvH4_4g12150 Fragaria vesca HOM05D006139 ORTHO05D007681 5.5e-22 107.5 73 60.3
FAN12G2778 Fragaria x ananassa HOM05D006139 ORTHO05D007681 5.5e-22 107.5 73 60.3
Lj4A728T41 Lonicera japonica HOM05D006139 ORTHO05D007681 5.5e-22 107.5 74 63.5
TAR365G1167 Trochodendron aralioides HOM05D006139 ORTHO05D007681 7.1e-22 107.1 73 64.4
Migut.N00440 Erythranthe guttata HOM05D006139 ORTHO05D007681 9.3e-22 106.7 73 64.4
FAN07G2792 Fragaria x ananassa HOM05D006139 ORTHO05D007681 9.3e-22 106.7 73 58.9
COL.COLO4_17513 Corchorus olitorius HOM05D006139 ORTHO05D007681 1.2e-21 106.3 74 63.5
PGR031G2404 Punica granatum HOM05D006139 ORTHO05D007681 1.2e-21 106.3 73 63.0
Hund19684 Selenicereus undatus HOM05D006139 ORTHO05D007681 1.2e-21 106.3 73 63.0
Eucgr.F03241 Eucalyptus grandis HOM05D006139 ORTHO05D007681 1.6e-21 105.9 73 64.4
Prupe.1G178000 Prunus persica HOM05D006139 ORTHO05D007681 1.6e-21 105.9 73 61.6
Solyc09g098230.3 Solanum lycopersicum HOM05D006139 ORTHO05D007681 1.6e-21 105.9 74 62.2
FAN17G0552 Fragaria x ananassa HOM05D006139 ORTHO05D007681 2.1e-21 105.5 73 60.3
Nitab4.5_0001526g0130 Nicotiana tabacum HOM05D006139 ORTHO05D007681 2.1e-21 105.5 71 63.4
MELO3C017678.2 Cucumis melo HOM05D006139 ORTHO05D007681 2.7e-21 105.1 73 64.4
CsaV3_4G003770 Cucumis sativus L. HOM05D006139 ORTHO05D007681 2.7e-21 105.1 73 64.4
RcHm_v2.0_Chr4g0409801 Rosa chinensis HOM05D006139 ORTHO05D007681 2.7e-21 105.1 73 61.6
GSVIVG01031668001 Vitis vinifera HOM05D006139 ORTHO05D007681 2.7e-21 105.1 73 60.3
Cpa.g.sc77.50 Carica papaya HOM05D006139 ORTHO05D007681 4.6e-21 104.4 73 63.0
Atru.chr2.2053 Acer truncatum HOM05D006139 ORTHO05D007681 1.0e-20 103.2 73 64.4
Haze_11079 Corylus avellana HOM05D006139 ORTHO05D007681 1.0e-20 103.2 68 67.6
CiPaw.01G108300 Carya illinoinensis HOM05D006139 ORTHO05D007681 1.3e-20 102.8 74 62.2
MD13G1278700 Malus domestica HOM05D006139 ORTHO05D007681 1.3e-20 102.8 73 61.6
Ciclev10019318m.g Citrus clementina HOM05D006139 ORTHO05D007681 1.8e-20 102.4 73 63.0
Sc22g0003230 Simmondsia chinensis HOM05D006139 ORTHO05D007681 1.8e-20 102.4 74 62.2
Carub.0001s1670 Capsella rubella HOM05D006139 ORTHO05D007681 2.3e-20 102.1 73 60.3
CAN.G710.40 Capsicum annuum HOM05D006139 ORTHO05D007681 2.3e-20 102.1 74 56.8
Gohir.A01G052100 Gossypium hirsutum HOM05D006139 ORTHO05D007681 2.3e-20 102.1 73 60.3
PGSC0003DMG400014069 Solanum tuberosum HOM05D006139 ORTHO05D007681 2.3e-20 102.1 66 65.2
Zm00001eb116810 Zea mays HOM05D006139 ORTHO05D007681 2.3e-20 102.1 70 65.7
Gorai.002G052100 Gossypium raimondii HOM05D006139 ORTHO05D007681 3.0e-20 101.7 73 60.3
Mapoly0113s0020 Marchantia polymorpha HOM05D006139 ORTHO05D007681 3.0e-20 101.7 73 61.6
Sabra11G0095200 Salix brachista HOM05D006139 ORTHO05D007681 3.0e-20 101.7 73 60.3
SMO361G0513 Selaginella moellendorffii HOM05D006139 ORTHO05D007681 3.0e-20 101.7 73 60.3
MBI07_g00628_MAGBIO Magnolia biondii HOM05D006139 ORTHO05D007681 5.1e-20 100.9 73 63.0
Nn3g20967 Nelumbo nucifera HOM05D006139 ORTHO05D007681 5.1e-20 100.9 73 61.6
SGA_v2.0_scaffold109G31142 Striga asiatica HOM05D006139 ORTHO05D007681 5.1e-20 100.9 73 60.3
AT1G16970 Arabidopsis thaliana HOM05D006139 ORTHO05D007681 6.7e-20 100.5 73 56.2
Peaxi162Scf00286g00443 Petunia axillaris HOM05D006139 ORTHO05D007681 6.7e-20 100.5 72 59.7
SMO361G0769 Selaginella moellendorffii HOM05D006139 ORTHO05D007681 6.7e-20 100.5 73 58.9
ClCG07G016640 Citrullus lanatus HOM05D006139 ORTHO05D007681 8.7e-20 100.1 68 67.6
Nitab4.5_0001687g0050 Nicotiana tabacum HOM05D006139 ORTHO05D007681 1.1e-19 99.8 66 66.7
Pp3c18_7140 Physcomitrium patens HOM05D006139 ORTHO05D007681 1.5e-19 99.4 73 57.5
Gohir.D01G041500 Gossypium hirsutum HOM05D006139 ORTHO05D007681 2.5e-19 98.6 73 58.9
Potri.011G107400 Populus trichocarpa HOM05D006139 ORTHO05D007681 2.5e-19 98.6 73 57.5
BcaB02g06659 Brassica carinata HOM05D006139 ORTHO05D007681 3.3e-19 98.2 70 64.3
BcaC05g25552 Brassica carinata HOM05D006139 ORTHO05D007681 3.3e-19 98.2 70 64.3
BolC5t30234H Brassica oleracea HOM05D006139 ORTHO05D007681 3.3e-19 98.2 70 64.3
C05p15280 Brassica napus HOM05D006139 ORTHO05D007681 4.3e-19 97.8 70 64.3
Sp1g15110 Schrenkiella parvula HOM05D006139 ORTHO05D007681 4.3e-19 97.8 70 62.9
arahy.Tifrunner.gnm1.ann1.46LBLY Arachis hypogaea HOM05D006139 ORTHO05D007681 5.7e-19 97.4 73 57.5
Psat6g243280 Pisum sativum HOM05D006139 ORTHO05D007681 5.7e-19 97.4 73 57.5
CDE02G2779 Ceratophyllum demersum HOM05D006139 ORTHO05D007681 9.7e-19 96.7 73 57.5
Thhalv10007085m.g Eutrema salsugineum HOM05D006139 ORTHO05D007681 9.7e-19 96.7 70 60.0
A06p12870 Brassica napus HOM05D006139 ORTHO05D007681 1.3e-18 96.3 70 62.9
BraA06t24447Z Brassica rapa HOM05D006139 ORTHO05D007681 1.3e-18 96.3 70 62.9
AUR62003718 Chenopodium quinoa HOM05D006139 ORTHO05D007681 1.3e-18 96.3 74 56.8
AUR62018029 Chenopodium quinoa HOM05D006139 ORTHO05D007681 1.3e-18 96.3 74 56.8
Medtr1g116980 Medicago truncatula HOM05D006139 ORTHO05D007681 3.7e-18 94.7 73 56.2
Glyma.20G248800 Glycine max HOM05D006139 ORTHO05D007681 6.3e-18 94.0 73 54.8
Lalb_Chr06g0164661 Lupinus albus HOM05D006139 ORTHO05D007681 6.3e-18 94.0 73 54.8
Phvul.007G001600 Phaseolus vulgaris HOM05D006139 ORTHO05D007681 1.1e-17 93.2 73 54.8
CARHR017480 Cardamine hirsuta HOM05D006139 ORTHO05D007681 2.4e-17 92.0 74 58.1
VMungo0720G1636 Vigna mungo HOM05D006139 ORTHO05D007681 5.3e-17 90.9 73 50.7
TPR.G8879 Trifolium pratense HOM05D006139 ORTHO05D007681 9.0e-17 90.1 70 57.1
Lj5g0023092 Lotus japonicus HOM05D006139 ORTHO05D007681 2.6e-16 88.6 73 53.4
THA.LOC104812308 Tarenaya hassleriana HOM05D006139 ORTHO05D007681 2.6e-16 88.6 70 54.3
AagrBONN_evm.TU.Sc2ySwM_228.1556 Anthoceros agrestis HOM05D006139 ORTHO05D007681 1.7e-15 85.9 71 57.7
CBR_g19434 Chara braunii HOM05D006139 ORTHO05D007681 1.7e-15 85.9 72 55.6
SHI27652 Sapria himalayana HOM05D006139 ORTHO05D007681 1.4e-12 76.3 54 63.0
Cfa021664 Carpinus fangiana HOM05D006139 ORTHO05D007681 3.8e-07 58.2 87 34.5
Cre13.g607500 Chlamydomonas reinhardtii HOM05D006139 ORTHO05D007681 4.2e-06 54.7 65 44.6


User provided reference genes

Program Settings