Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_31144 Sequoiadendron giganteum HOM05D002519 ORTHO05D002747 2.1e-91 339.0 168 100.0
SEGI_27531 Sequoiadendron giganteum HOM05D002519 ORTHO05D002747 5.7e-36 154.8 99 81.8
Nn5g29162 Nelumbo nucifera HOM05D002519 ORTHO05D002747 1.2e-09 67.4 51 54.9
Dinv31803 Davidia involucrata HOM05D002519 ORTHO05D002747 2.0e-09 66.6 53 58.5
arahy.Tifrunner.gnm1.ann1.UQ4UHV Arachis hypogaea HOM05D002519 ORTHO05D002747 2.7e-09 66.2 62 51.6
ATR0661G171 Amborella trichopoda HOM05D002519 ORTHO05D002747 3.5e-09 65.9 84 44.0
Sabra02G0023000 Salix brachista HOM05D002519 ORTHO05D002747 4.6e-09 65.5 65 47.7
Sc26g0003330 Simmondsia chinensis HOM05D002519 ORTHO05D002747 4.6e-09 65.5 51 52.9
TAR376G0689 Trochodendron aralioides HOM05D002519 ORTHO05D002747 4.6e-09 65.5 51 54.9
unitig_749.g13854 Utricularia gibba HOM05D002519 ORTHO05D002747 4.6e-09 65.5 50 60.0
Aqoxy6G02437 Aquilegia oxysepala HOM05D002519 ORTHO05D002747 5.9e-09 65.1 58 50.0
Haze_16921 Corylus avellana HOM05D002519 ORTHO05D002747 5.9e-09 65.1 60 48.3
Cfa001605 Carpinus fangiana HOM05D002519 ORTHO05D002747 7.8e-09 64.7 60 50.0
MSTRG.24270 Avicennia marina HOM05D002519 ORTHO05D002747 1.0e-08 64.3 58 51.7
GSVIVG01009806001 Vitis vinifera HOM05D002519 ORTHO05D002747 1.0e-08 64.3 63 47.6
CiPaw.01G274900 Carya illinoinensis HOM05D002519 ORTHO05D002747 1.3e-08 63.9 63 46.0
Migut.C00782 Erythranthe guttata HOM05D002519 ORTHO05D002747 1.3e-08 63.9 49 53.1
AUR62034549 Chenopodium quinoa HOM05D002519 ORTHO05D002747 1.7e-08 63.5 59 47.5
COL.COLO4_26217 Corchorus olitorius HOM05D002519 ORTHO05D002747 1.7e-08 63.5 129 34.1
Glyma.06G027900 Glycine max HOM05D002519 ORTHO05D002747 1.7e-08 63.5 56 51.8
TWI56G0427 Tripterygium wilfordii HOM05D002519 ORTHO05D002747 1.7e-08 63.5 50 60.0
TAR623G1324 Trochodendron aralioides HOM05D002519 ORTHO05D002747 1.7e-08 63.5 53 49.1
CDE04G2675 Ceratophyllum demersum HOM05D002519 ORTHO05D002747 2.3e-08 63.2 51 54.9
AUR62014448 Chenopodium quinoa HOM05D002519 ORTHO05D002747 2.3e-08 63.2 59 45.8
arahy.Tifrunner.gnm1.ann1.XW2FM5 Arachis hypogaea HOM05D002519 ORTHO05D002747 3.0e-08 62.8 111 41.4
Nn1g05978 Nelumbo nucifera HOM05D002519 ORTHO05D002747 3.0e-08 62.8 48 54.2
Oeu030403.2 Olea europaea HOM05D002519 ORTHO05D002747 3.0e-08 62.8 67 49.3
CiPaw.08G061800 Carya illinoinensis HOM05D002519 ORTHO05D002747 3.9e-08 62.4 52 55.8
Lalb_Chr23g0266351 Lupinus albus HOM05D002519 ORTHO05D002747 3.9e-08 62.4 55 56.4
Sed0009290 Sechium edule HOM05D002519 ORTHO05D002747 3.9e-08 62.4 63 46.0
EL10Ac1g00569 Beta vulgaris HOM05D002519 ORTHO05D002747 5.0e-08 62.0 59 45.8
CSS0043906 Camellia sinensis var. sinensis HOM05D002519 ORTHO05D002747 5.0e-08 62.0 60 50.0
CSS0050472 Camellia sinensis var. sinensis HOM05D002519 ORTHO05D002747 5.0e-08 62.0 55 52.7
Sed0001194 Sechium edule HOM05D002519 ORTHO05D002747 5.0e-08 62.0 50 56.0
Ah.05g172080 Amaranthus hybridus HOM05D002519 ORTHO05D002747 6.6e-08 61.6 74 39.2
Glyma.04G027700 Glycine max HOM05D002519 ORTHO05D002747 6.6e-08 61.6 56 51.8
Gohir.A05G258000 Gossypium hirsutum HOM05D002519 ORTHO05D002747 6.6e-08 61.6 56 53.6
Potri.002G028900 Populus trichocarpa HOM05D002519 ORTHO05D002747 6.6e-08 61.6 52 51.9
Potri.005G233800 Populus trichocarpa HOM05D002519 ORTHO05D002747 6.6e-08 61.6 53 52.8
Thecc.08G036200 Theobroma cacao HOM05D002519 ORTHO05D002747 6.6e-08 61.6 52 53.8
CSS0009239 Camellia sinensis var. sinensis HOM05D002519 ORTHO05D002747 8.6e-08 61.2 53 54.7
PSO541G0797 Papaver somniferum HOM05D002519 ORTHO05D002747 8.6e-08 61.2 58 48.3
Duzib116G0790 Durio zibethinus HOM05D002519 ORTHO05D002747 1.1e-07 60.8 52 53.8
Lj1g0001366 Lotus japonicus HOM05D002519 ORTHO05D002747 1.1e-07 60.8 50 56.0
Manes.05G153300 Manihot esculenta HOM05D002519 ORTHO05D002747 1.1e-07 60.8 52 50.0
Nn2g10708 Nelumbo nucifera HOM05D002519 ORTHO05D002747 1.1e-07 60.8 51 51.0
Psat5g014160 Pisum sativum HOM05D002519 ORTHO05D002747 1.1e-07 60.8 60 48.3
Sabra05G0180300 Salix brachista HOM05D002519 ORTHO05D002747 1.1e-07 60.8 64 45.3
Sc20g0001990 Simmondsia chinensis HOM05D002519 ORTHO05D002747 1.1e-07 60.8 54 50.0
Gohir.D01G101300 Gossypium hirsutum HOM05D002519 ORTHO05D002747 1.5e-07 60.5 52 53.8
Gorai.002G125800 Gossypium raimondii HOM05D002519 ORTHO05D002747 1.5e-07 60.5 52 53.8
Medtr3g112490 Medicago truncatula HOM05D002519 ORTHO05D002747 1.5e-07 60.5 55 50.9
Atru.chr13.377 Acer truncatum HOM05D002519 ORTHO05D002747 1.9e-07 60.1 49 53.1
ClCG08G014620 Citrullus lanatus HOM05D002519 ORTHO05D002747 1.9e-07 60.1 52 51.9
ClCG09G020560 Citrullus lanatus HOM05D002519 ORTHO05D002747 1.9e-07 60.1 62 50.0
Ciclev10002202m.g Citrus clementina HOM05D002519 ORTHO05D002747 1.9e-07 60.1 69 40.6
Ciclev10032402m.g Citrus clementina HOM05D002519 ORTHO05D002747 1.9e-07 60.1 63 42.9
CsaV3_2G029190 Cucumis sativus L. HOM05D002519 ORTHO05D002747 1.9e-07 60.1 52 51.9
Lsat_1_v5_gn_1_16480 Lactuca sativa HOM05D002519 ORTHO05D002747 1.9e-07 60.1 56 51.8
Phvul.009G013500 Phaseolus vulgaris HOM05D002519 ORTHO05D002747 1.9e-07 60.1 66 45.5
Potri.010G219800 Populus trichocarpa HOM05D002519 ORTHO05D002747 1.9e-07 60.1 54 57.4
Rhsim06G0027200 Rhododendron simsii HOM05D002519 ORTHO05D002747 1.9e-07 60.1 69 46.4
Hund17207 Selenicereus undatus HOM05D002519 ORTHO05D002747 1.9e-07 60.1 51 51.0
TPR.G12433 Trifolium pratense HOM05D002519 ORTHO05D002747 1.9e-07 60.1 56 51.8
VMungo1309G2730 Vigna mungo HOM05D002519 ORTHO05D002747 1.9e-07 60.1 66 45.5
CiPaw.07G155000 Carya illinoinensis HOM05D002519 ORTHO05D002747 2.5e-07 59.7 52 53.8
MELO3C010981.2 Cucumis melo HOM05D002519 ORTHO05D002747 2.5e-07 59.7 52 51.9
CsaV3_5G025800 Cucumis sativus L. HOM05D002519 ORTHO05D002747 2.5e-07 59.7 48 56.2
HanXRQChr16g0501411 Helianthus annuus HOM05D002519 ORTHO05D002747 2.5e-07 59.7 50 54.0
MD15G1019500 Malus domestica HOM05D002519 ORTHO05D002747 2.5e-07 59.7 76 40.8
PSO675G5473 Papaver somniferum HOM05D002519 ORTHO05D002747 2.5e-07 59.7 58 46.6
QL02p010502 Quercus lobata HOM05D002519 ORTHO05D002747 2.5e-07 59.7 52 51.9
VMungo0464G1286 Vigna mungo HOM05D002519 ORTHO05D002747 2.5e-07 59.7 48 56.2
Cfa013895 Carpinus fangiana HOM05D002519 ORTHO05D002747 3.3e-07 59.3 52 51.9
Haze_22574 Corylus avellana HOM05D002519 ORTHO05D002747 3.3e-07 59.3 52 51.9
Oeu046234.2 Olea europaea HOM05D002519 ORTHO05D002747 3.3e-07 59.3 62 45.2
Solyc07g032090.4 Solanum lycopersicum HOM05D002519 ORTHO05D002747 4.3e-07 58.9 71 42.3
Sopen07g015280 Solanum pennellii HOM05D000004 ORTHO05D000002 4.3e-07 58.9 71 42.3
Eucgr.F01846 Eucalyptus grandis HOM05D002519 ORTHO05D002747 5.6e-07 58.5 54 51.9
Gorai.009G271200 Gossypium raimondii HOM05D002519 ORTHO05D002747 5.6e-07 58.5 62 48.4
Actinidia15378 Actinidia chinensis HOM05D002519 ORTHO05D002747 7.3e-07 58.2 53 50.9
Ca_02066_v3 Cicer arietinum L. HOM05D002519 ORTHO05D002747 7.3e-07 58.2 47 55.3
DCAR_009952 Daucus carota HOM05D002519 ORTHO05D002747 7.3e-07 58.2 45 57.8
Hma1.2p1_1386F.1_g279890 Hydrangea macrophylla HOM05D002519 ORTHO05D002747 7.3e-07 58.2 51 52.9
Lj2g0000462 Lotus japonicus HOM05D002519 ORTHO05D002747 7.3e-07 58.2 48 52.1
MD08G1022300 Malus domestica HOM05D002519 ORTHO05D002747 7.3e-07 58.2 76 42.1
Prupe.1G371700 Prunus persica HOM05D002519 ORTHO05D002747 7.3e-07 58.2 106 35.8
Cc10_g02230 Coffea canephora HOM05D002519 ORTHO05D002747 9.5e-07 57.8 57 45.6
Sabra10G0169600 Salix brachista HOM05D002519 ORTHO05D002747 9.5e-07 57.8 54 57.4
CSS0003019 Camellia sinensis var. sinensis HOM05D002519 ORTHO05D002747 1.2e-06 57.4 67 41.8
Duzib114G0752 Durio zibethinus HOM05D002519 ORTHO05D002747 1.2e-06 57.4 52 53.8
Gohir.D05G259400 Gossypium hirsutum HOM05D002519 ORTHO05D002747 1.2e-06 57.4 61 47.5
Sed0009083 Sechium edule HOM05D002519 ORTHO05D002747 1.2e-06 57.4 52 50.0
Hund22499 Selenicereus undatus HOM05D002519 ORTHO05D002747 1.2e-06 57.4 48 50.0
SGA_v2.0_scaffold162G37917 Striga asiatica HOM05D002519 ORTHO05D002747 1.2e-06 57.4 50 54.0
TWI63G0585 Tripterygium wilfordii HOM05D002519 ORTHO05D002747 1.2e-06 57.4 49 46.9
Cpa.g.sc140.6 Carica papaya HOM05D002519 ORTHO05D002747 1.6e-06 57.0 54 46.3
ECA247G2772 Erigeron canadensis HOM05D002519 ORTHO05D002747 1.6e-06 57.0 43 60.5
TAR369G1075 Trochodendron aralioides HOM05D002519 ORTHO05D002747 1.6e-06 57.0 51 47.1
Migut.F01764 Erythranthe guttata HOM05D002519 ORTHO05D002747 2.1e-06 56.6 58 51.7
Pp3c26_1920 Physcomitrium patens HOM05D002519 ORTHO05D002747 2.1e-06 56.6 68 39.7
Pp3c26_1970 Physcomitrium patens HOM05D002519 ORTHO05D002747 2.1e-06 56.6 68 39.7
PGR031G1279 Punica granatum HOM05D002519 ORTHO05D002747 2.1e-06 56.6 50 50.0
TPR.G36642 Trifolium pratense HOM05D002519 ORTHO05D002747 2.1e-06 56.6 65 44.6
EL10Ac2g03587 Beta vulgaris HOM05D002519 ORTHO05D002747 2.8e-06 56.2 47 57.4
Lalb_Chr19g0129601 Lupinus albus HOM05D002519 ORTHO05D002747 2.8e-06 56.2 49 49.0
Os01g0772200 Oryza sativa ssp. japonica HOM05D002519 ORTHO05D002747 2.8e-06 56.2 76 38.2
THA.LOC104811402 Tarenaya hassleriana HOM05D002519 ORTHO05D002747 2.8e-06 56.2 50 50.0
GSVIVG01016312001 Vitis vinifera HOM05D002519 ORTHO05D002747 2.8e-06 56.2 62 48.4
arahy.Tifrunner.gnm1.ann1.4X8M90 Arachis hypogaea HOM05D002519 ORTHO05D002747 3.6e-06 55.8 119 34.5
MSTRG.25207 Avicennia marina HOM05D002519 ORTHO05D002747 3.6e-06 55.8 58 46.6
SalBow8G2127 Salvia bowleyana HOM05D002519 ORTHO05D002747 4.7e-06 55.5 53 47.2
vmacro21694 Vaccinium macrocarpon HOM05D002519 ORTHO05D002747 4.7e-06 55.5 67 46.3
QL08p056579 Quercus lobata HOM05D002519 ORTHO05D002747 8.0e-06 54.7 61 41.0


User provided reference genes

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