Gene: Pp3c26_1920

General Information

Structural Information

  • Species Physcomitrium patens
  • Gene Identifier Pp3c26_1920
  • Transcript Identifier Pp3c26_1920V3.2
  • Gene Type Coding gene
  • Location Chr26 : 881927-884162 : negative

Gene Family Information

  • ID HOM05D002519
  • #Genes/#Species 269/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name Pp3c26_1920V3.2
  • pacid 32917296
  • alias Phpat.026G008500
  • alias Pp1s149_258V6
  • uniprot A0A2K1IBG9

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006367
IBA
IEA
GOA Databasetranscription initiation from RNA polymerase II promoter
GO:0006367
IEA
InterProtranscription initiation from RNA polymerase II promoter
GO:0006366
IEA
GOA Databasetranscription by RNA polymerase II
GO:0006366
IEA
InterProtranscription by RNA polymerase II

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
GOA DatabaseDNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005674
IBA
IEA
GOA Databasetranscription factor TFIIF complex
GO:0005674
IEA
InterProtranscription factor TFIIF complex
GO:0005634
IEA
GOA Databasenucleus
GO:0005739
ISO
PLAZA Integrative Orthologymitochondrion AT1G75510

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011039 Transcription Factor IIF, Rap30/Rap74, interaction
IPR036390 Winged helix DNA-binding domain superfamily
IPR040450 TFIIF beta subunit, HTH domain
IPR003196 Transcription initiation factor IIF, beta subunit
IPR036388 Winged helix-like DNA-binding domain superfamily
IPR040504 TFIIF, beta subunit, N-terminal
Mapman id Description
15.3.3.4.2 RNA biosynthesis.RNA polymerase II-dependent transcription.transcription initiation.TFIIf basal transcription factor heterodimer.subunit beta