Gene: vmacro21694
General Information
Structural Information
- Species Vaccinium macrocarpon
- Gene Identifier vmacro21694
- Transcript Identifier vmacro21694-RA
- Gene Type Coding gene
- Location chr10_Vaccinium_macrocarpon_Stevens_v1 : 2865413-2868887 : positive
Gene Family Information
- ID HOM05D002519
- #Genes/#Species 269/97
- Phylogenetic origin
- ID ORTHO05D002747
- #Genes/#Species 265/97
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- id vmacro21694_Vaccinium_macrocarpon_Stevens_v1
Descriptions
- Description Similar to tfg2: Transcription initiation factor IIF subunit beta (Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006366 | IEA | InterPro | transcription by RNA polymerase II | |
| GO:0006367 | IEA | InterPro | transcription initiation from RNA polymerase II promoter |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005674 | IEA | InterPro | transcription factor TFIIF complex | |
| GO:0005739 | ISO | PLAZA Integrative Orthology | mitochondrion | AT1G75510 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR036390 | Winged helix DNA-binding domain superfamily |
| IPR003196 | Transcription initiation factor IIF, beta subunit |
| IPR040450 | TFIIF beta subunit, HTH domain |
| IPR011039 | Transcription Factor IIF, Rap30/Rap74, interaction |
| IPR036388 | Winged helix-like DNA-binding domain superfamily |
| IPR040504 | TFIIF, beta subunit, N-terminal |
| Mapman id | Description |
|---|---|
| 15.3.3.4.2 | RNA biosynthesis.RNA polymerase II-dependent transcription.transcription initiation.TFIIf basal transcription factor heterodimer.subunit beta |