Gene: Duzib116G0790
General Information
Structural Information
- Species Durio zibethinus
- Gene Identifier Duzib116G0790
- Transcript Identifier Duzib116G0790.01
- Gene Type Coding gene
- Location NW_019167949.1 : 1206172-1208323 : positive
Gene Family Information
- ID HOM05D002519
- #Genes/#Species 269/97
- Phylogenetic origin
- ID ORTHO05D002747
- #Genes/#Species 265/97
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- name LOC111315325
- name XM_022916963.1
- pid XP_022772698.1
- id gene-LOC111315325
- uniprot A0A6P6B679
Descriptions
- product general transcription factor IIF subunit 2-like
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006367 | IEA | GOA Database | transcription initiation from RNA polymerase II promoter | |
| GO:0006367 | IEA | InterPro | transcription initiation from RNA polymerase II promoter | |
| GO:0006366 | IEA | GOA Database | transcription by RNA polymerase II | |
| GO:0006366 | IEA | InterPro | transcription by RNA polymerase II |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003677 | IEA | GOA Database | DNA binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005674 | IEA | GOA Database | transcription factor TFIIF complex | |
| GO:0005674 | IEA | InterPro | transcription factor TFIIF complex | |
| GO:0005634 | IEA | GOA Database | nucleus | |
| GO:0005739 | ISO | PLAZA Integrative Orthology | mitochondrion | AT1G75510 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR036388 | Winged helix-like DNA-binding domain superfamily |
| IPR036390 | Winged helix DNA-binding domain superfamily |
| IPR040450 | TFIIF beta subunit, HTH domain |
| IPR011039 | Transcription Factor IIF, Rap30/Rap74, interaction |
| IPR040504 | TFIIF, beta subunit, N-terminal |
| IPR003196 | Transcription initiation factor IIF, beta subunit |
| Mapman id | Description |
|---|---|
| 15.3.3.4.2 | RNA biosynthesis.RNA polymerase II-dependent transcription.transcription initiation.TFIIf basal transcription factor heterodimer.subunit beta |