Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_29966 Sequoiadendron giganteum HOM05D003161 ORTHO05D015567 3.5e-172 608.2 309 100.0
SEGI_32968 Sequoiadendron giganteum HOM05D003161 ORTHO05D005173 3.0e-107 392.5 196 100.0
ATR0737G016 Amborella trichopoda HOM05D003161 ORTHO05D005173 8.5e-70 268.1 307 50.8
CARHR086520 Cardamine hirsuta HOM05D003161 ORTHO05D005173 9.4e-61 238.0 303 46.2
Lj2C361G9 Lonicera japonica HOM05D003161 ORTHO05D005173 9.4e-61 238.0 302 46.7
TAR633G1132 Trochodendron aralioides HOM05D003161 ORTHO05D005173 2.3e-59 233.4 304 46.4
Sopen03g011350 Solanum pennellii HOM05D003161 ORTHO05D005173 6.8e-59 231.9 277 49.1
C05p55950 Brassica napus HOM05D003161 ORTHO05D005173 8.8e-59 231.5 306 45.8
BolC5t34262H Brassica oleracea HOM05D003161 ORTHO05D005173 8.8e-59 231.5 306 45.8
Aqoxy2G02393 Aquilegia oxysepala HOM05D003161 ORTHO05D005173 2.6e-58 229.9 315 45.7
GSVIVG01033430001 Vitis vinifera HOM05D003161 ORTHO05D005173 3.4e-58 229.6 305 45.6
A05p37390 Brassica napus HOM05D003161 ORTHO05D005173 9.8e-58 228.0 308 44.8
BolC1t05277H Brassica oleracea HOM05D003161 ORTHO05D005173 2.2e-57 226.9 303 43.9
BraA05t22538Z Brassica rapa HOM05D003161 ORTHO05D005173 2.2e-57 226.9 304 45.4
Peaxi162Scf00045g00223 Petunia axillaris HOM05D003161 ORTHO05D005173 2.2e-57 226.9 302 46.0
THA.LOC104826779 Tarenaya hassleriana HOM05D003161 ORTHO05D005173 2.2e-57 226.9 283 47.7
BraA01t04149Z Brassica rapa HOM05D003161 ORTHO05D005173 4.8e-57 225.7 303 43.9
Prupe.7G085700 Prunus persica HOM05D003161 ORTHO05D005173 8.3e-57 224.9 306 44.8
MD12G1051100 Malus domestica HOM05D003161 ORTHO05D005173 1.1e-56 224.6 305 44.6
ECA238G1915 Erigeron canadensis HOM05D003161 ORTHO05D005173 3.1e-56 223.0 310 44.5
Actinidia38605 Actinidia chinensis HOM05D003161 ORTHO05D005173 5.4e-56 222.2 302 43.7
BcaB04g21101 Brassica carinata HOM05D003161 ORTHO05D005173 7.0e-56 221.9 303 42.9
CANSAT64G2741 Cannabis sativa HOM05D003161 ORTHO05D005173 7.0e-56 221.9 305 43.6
CAN.G479.45 Capsicum annuum HOM05D003161 ORTHO05D005173 7.0e-56 221.9 283 45.9
Cc06_g23250 Coffea canephora HOM05D003161 ORTHO05D005173 7.0e-56 221.9 282 44.3
Carub.0003s1130 Capsella rubella HOM05D003161 ORTHO05D005173 9.1e-56 221.5 301 43.9
Oeu046733.1 Olea europaea HOM05D003161 ORTHO05D005173 1.2e-55 221.1 288 46.2
Thecc.05G180200 Theobroma cacao HOM05D003161 ORTHO05D005173 1.2e-55 221.1 304 43.8
TWI53G1521 Tripterygium wilfordii HOM05D003161 ORTHO05D005173 1.2e-55 221.1 308 43.8
FAN14G4107 Fragaria x ananassa HOM05D003161 ORTHO05D005173 1.6e-55 220.7 307 43.3
FvH4_6g21470 Fragaria vesca HOM05D003161 ORTHO05D005173 2.0e-55 220.3 307 43.0
Potri.016G062600 Populus trichocarpa HOM05D003161 ORTHO05D005173 2.0e-55 220.3 306 44.4
Ah.15g091410 Amaranthus hybridus HOM05D003161 ORTHO05D005173 2.7e-55 219.9 307 45.0
FAN05G0820 Fragaria x ananassa HOM05D003161 ORTHO05D005173 3.5e-55 219.5 307 43.3
FAN09G2861 Fragaria x ananassa HOM05D003161 ORTHO05D005173 3.5e-55 219.5 283 45.2
Hund19220 Selenicereus undatus HOM05D003161 ORTHO05D005173 4.5e-55 219.2 312 44.2
Sp3g10190 Schrenkiella parvula HOM05D003161 ORTHO05D005173 5.9e-55 218.8 304 43.4
AT3G11964 Arabidopsis thaliana HOM05D003161 ORTHO05D005173 7.7e-55 218.4 303 44.9
Thhalv10019877m.g Eutrema salsugineum HOM05D003161 ORTHO05D005173 7.7e-55 218.4 303 44.9
FAN05G2723 Fragaria x ananassa HOM05D003161 ORTHO05D005173 1.3e-54 217.6 307 43.0
DCAR_016871 Daucus carota HOM05D003161 ORTHO05D005173 1.7e-54 217.2 300 43.7
Manes.09G040300 Manihot esculenta HOM05D003161 ORTHO05D005173 2.2e-54 216.9 307 45.0
AL3G23570 Arabidopsis lyrata HOM05D003161 ORTHO05D005173 2.9e-54 216.5 301 43.9
Sc19g0006250 Simmondsia chinensis HOM05D003161 ORTHO05D005173 2.9e-54 216.5 314 44.3
vmacro22129 Vaccinium macrocarpon HOM05D003161 ORTHO05D015567 2.9e-54 216.5 304 43.8
EL10Ac7g16694 Beta vulgaris HOM05D003161 ORTHO05D005173 3.8e-54 216.1 315 44.1
AUR62026957 Chenopodium quinoa HOM05D003161 ORTHO05D005173 3.8e-54 216.1 307 43.0
Eucgr.A02507 Eucalyptus grandis HOM05D003161 ORTHO05D005173 5.0e-54 215.7 302 42.7
RcHm_v2.0_Chr3g0478661 Rosa chinensis HOM05D003161 ORTHO05D005173 6.5e-54 215.3 305 41.6
FAN02G0008 Fragaria x ananassa HOM05D003161 ORTHO05D005173 8.5e-54 214.9 307 42.7
Sabra16G0064500 Salix brachista HOM05D003161 ORTHO05D005173 1.1e-53 214.5 306 44.1
SalBow1G2678 Salvia bowleyana HOM05D003161 ORTHO05D005173 2.5e-53 213.4 294 43.2
Duzib128G1871 Durio zibethinus HOM05D003161 ORTHO05D005173 3.2e-53 213.0 310 42.3
PGR004G2129 Punica granatum HOM05D003161 ORTHO05D005173 9.4e-53 211.5 305 42.3
Atru.chr8.1220 Acer truncatum HOM05D003161 ORTHO05D005173 1.2e-52 211.1 302 43.7
Lsat_1_v5_gn_2_58000 Lactuca sativa HOM05D003161 ORTHO05D005173 1.6e-52 210.7 281 44.5
CDE02G0114 Ceratophyllum demersum HOM05D003161 ORTHO05D005173 2.1e-52 210.3 286 45.1
Mapoly0019s0051 Marchantia polymorpha HOM05D003161 ORTHO05D005173 2.1e-52 210.3 296 42.6
Aa31sc238G10 Aethionema arabicum HOM05D003161 ORTHO05D005173 2.7e-52 209.9 297 43.8
QL07p025506 Quercus lobata HOM05D003161 ORTHO05D005173 6.1e-52 208.8 329 41.6
Pp3c4_30330 Physcomitrium patens HOM05D003161 ORTHO05D005173 1.0e-51 208.0 297 42.1
MSTRG.26730 Avicennia marina HOM05D003161 ORTHO05D005173 5.2e-51 205.7 282 44.0
Migut.K00013 Erythranthe guttata HOM05D003161 ORTHO05D005173 6.8e-51 205.3 312 41.0
SGA_v2.0_scaffold274G46506 Striga asiatica HOM05D003161 ORTHO05D005173 6.8e-51 205.3 309 42.4
PSO339G0479 Papaver somniferum HOM05D003161 ORTHO05D005173 1.2e-50 204.5 315 42.5
Solyc03g051900.4 Solanum lycopersicum HOM05D003161 ORTHO05D005173 1.5e-50 204.1 264 47.3
Cfa020115 Carpinus fangiana HOM05D003161 ORTHO05D005173 5.7e-50 202.2 280 43.9
PSO384G1659 Papaver somniferum HOM05D003161 ORTHO05D005173 1.3e-49 201.1 301 41.9
Lalb_Chr21g0316111 Lupinus albus HOM05D003161 ORTHO05D005173 2.2e-49 200.3 309 43.0
Glyma.02G168900 Glycine max HOM05D003161 ORTHO05D005173 1.8e-48 197.2 306 40.2
Glyma.09G104000 Glycine max HOM05D003161 ORTHO05D005173 3.1e-48 196.4 312 40.4
Medtr1g054710 Medicago truncatula HOM05D003161 ORTHO05D005173 1.2e-47 194.5 301 42.2
CiPaw.08G134900 Carya illinoinensis HOM05D003161 ORTHO05D005173 2.0e-47 193.7 304 41.1
CsaV3_4G031200 Cucumis sativus L. HOM05D003161 ORTHO05D005173 2.7e-47 193.4 306 38.9
TPR.G14502 Trifolium pratense HOM05D003161 ORTHO05D005173 5.9e-47 192.2 279 43.7
arahy.Tifrunner.gnm1.ann1.S31791 Arachis hypogaea HOM05D003161 ORTHO05D005173 3.8e-46 189.5 289 39.8
Gohir.D09G126300 Gossypium hirsutum HOM05D003161 ORTHO05D005173 6.6e-46 188.7 306 40.8
Psat6g109960 Pisum sativum HOM05D003161 ORTHO05D005173 6.6e-46 188.7 311 41.5
arahy.Tifrunner.gnm1.ann1.PL5CUR Arachis hypogaea HOM05D003161 ORTHO05D005173 8.6e-46 188.3 290 41.0
Gorai.006G145100 Gossypium raimondii HOM05D003161 ORTHO05D005173 8.6e-46 188.3 306 40.5
MELO3C008994.2 Cucumis melo HOM05D003161 ORTHO05D005173 1.1e-45 188.0 306 37.9
Lj5g0006535 Lotus japonicus HOM05D003161 ORTHO05D005173 1.5e-45 187.6 318 38.7
Gohir.A09G130300 Gossypium hirsutum HOM05D003161 ORTHO05D005173 1.9e-45 187.2 306 40.5
VMungo0720G1738 Vigna mungo HOM05D003161 ORTHO05D005173 1.9e-45 187.2 314 40.4
Sed0016761 Sechium edule HOM05D003161 ORTHO05D005173 3.3e-45 186.4 308 37.7
Ca_25942_v3 Cicer arietinum L. HOM05D003161 ORTHO05D005173 9.5e-45 184.9 299 40.5
Phvul.007G270000 Phaseolus vulgaris HOM05D003161 ORTHO05D005173 9.5e-45 184.9 308 39.3
Haze_20072 Corylus avellana HOM05D003161 ORTHO05D005173 1.2e-44 184.5 282 42.2
HanXRQChr14g0457761 Helianthus annuus HOM05D003161 ORTHO05D005173 3.6e-44 183.0 262 43.1
Dinv25021 Davidia involucrata HOM05D003161 ORTHO05D005173 8.0e-44 181.8 270 42.2
BcaC09g48184 Brassica carinata HOM05D003161 ORTHO05D005173 2.6e-42 176.8 197 48.7
Ciclev10013867m.g Citrus clementina HOM05D003161 ORTHO05D005173 4.4e-42 176.0 320 37.8
COL.COLO4_29434 Corchorus olitorius HOM05D003161 ORTHO05D005173 2.9e-41 173.3 306 38.2
AUR62041562 Chenopodium quinoa HOM05D003161 ORTHO05D005173 2.4e-40 170.2 210 45.2
AagrBONN_evm.TU.Sc2ySwM_340.243 Anthoceros agrestis HOM05D003161 ORTHO05D005173 3.3e-37 159.8 274 38.3
HPP92_015879 Vanilla planifolia HOM05D003161 ORTHO05D005173 1.6e-36 157.5 200 45.0
CSS0010787 Camellia sinensis var. sinensis HOM05D003161 ORTHO05D005173 6.8e-35 152.1 310 37.1
Rhsim04G0093500 Rhododendron simsii HOM05D003161 ORTHO05D005173 2.6e-34 150.2 193 44.0
CSS0043330 Camellia sinensis var. sinensis HOM05D003161 ORTHO05D005173 2.9e-33 146.7 317 34.7
CBR_g22381 Chara braunii HOM05D003161 ORTHO05D005173 6.6e-30 135.6 322 32.0
Nitab4.5_0000571g0080 Nicotiana tabacum HOM05D003161 ORTHO05D015567 1.5e-29 134.4 235 39.1
Nitab4.5_0001364g0080 Nicotiana tabacum HOM05D003161 ORTHO05D015567 1.5e-29 134.4 234 38.5
MD14G1050300 Malus domestica HOM05D003161 ORTHO05D005173 4.0e-27 126.3 202 38.1
unitig_744.g24086 Utricularia gibba HOM05D003161 ORTHO05D005173 4.0e-27 126.3 153 46.4
Cre10.g428750 Chlamydomonas reinhardtii HOM05D003161 ORTHO05D005173 4.9e-25 119.4 278 35.3
CAN.G1433.26 Capsicum annuum HOM05D003161 ORTHO05D015567 3.2e-24 116.7 177 41.2
HPP92_027317 Vanilla planifolia HOM05D003161 ORTHO05D005173 2.7e-23 113.6 126 49.2
Zm00001eb302830 Zea mays HOM05D003161 ORTHO05D005173 4.6e-23 112.8 124 49.2
Hund18985 Selenicereus undatus HOM05D003161 ORTHO05D015567 4.7e-20 102.8 141 41.1
Cpa.g.sc85.24 Carica papaya HOM05D003161 ORTHO05D015567 4.4e-18 96.3 129 45.0
Hund30424 Selenicereus undatus HOM05D003161 ORTHO05D015567 1.3e-17 94.7 138 39.1
PSO384G3517 Papaver somniferum HOM05D003161 ORTHO05D005173 5.1e-14 82.8 151 38.4
Nitab4.5_0001364g0070 Nicotiana tabacum HOM05D003161 ORTHO05D005173 3.3e-13 80.1 69 55.1
SHI30032 Sapria himalayana HOM05D003161 ORTHO05D015567 5.2e-11 72.8 125 44.0
SMO137G0021 Selaginella moellendorffii HOM05D003161 ORTHO05D005173 6.9e-11 72.4 66 53.0
TWI74G1605 Tripterygium wilfordii HOM05D003161 ORTHO05D005173 7.6e-10 68.9 106 39.6
TWI74G0321 Tripterygium wilfordii HOM05D003161 ORTHO05D005173 4.9e-09 66.2 122 35.2
Cpa.g.sc85.25 Carica papaya HOM05D003161 ORTHO05D119738 1.1e-08 65.1 118 39.0
Psat7g030280 Pisum sativum HOM05D003161 ORTHO05D005173 1.1e-08 65.1 73 46.6
Dinv25019 Davidia involucrata HOM05D003161 ORTHO05D015567 2.7e-07 60.5 65 46.2
Cfa023914 Carpinus fangiana HOM05D003161 ORTHO05D005173 5.1e-06 56.2 318 23.9


User provided reference genes

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