Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_29832 Sequoiadendron giganteum HOM05D004387 ORTHO05D005218 9.9e-71 270.0 137 100.0
Lju124A41T49 Lonicera japonica HOM05D004387 ORTHO05D005218 1.4e-40 169.9 130 64.6
CSS0003189 Camellia sinensis var. sinensis HOM05D004387 ORTHO05D005218 1.8e-40 169.5 130 62.3
Mapoly0071s0030 Marchantia polymorpha HOM05D004387 ORTHO05D005218 5.3e-40 167.9 119 64.7
MBI11_g09466_MAGBIO Magnolia biondii HOM05D004387 ORTHO05D005218 6.9e-40 167.5 121 66.1
QL02p103266 Quercus lobata HOM05D004387 ORTHO05D005218 6.9e-40 167.5 122 63.1
Dinv39602 Davidia involucrata HOM05D004387 ORTHO05D005218 9.1e-40 167.2 130 63.1
Nn2g15223 Nelumbo nucifera HOM05D004387 ORTHO05D005218 9.1e-40 167.2 130 64.6
Cfa006454 Carpinus fangiana HOM05D004387 ORTHO05D005218 2.0e-39 166.0 130 60.0
ECA248G3203 Erigeron canadensis HOM05D004387 ORTHO05D005218 2.0e-39 166.0 118 67.8
Dinv12482 Davidia involucrata HOM05D004387 ORTHO05D005218 2.6e-39 165.6 130 61.5
Actinidia17236 Actinidia chinensis HOM05D004387 ORTHO05D005218 3.4e-39 165.2 130 62.3
ATR0626G351 Amborella trichopoda HOM05D004387 ORTHO05D005218 3.4e-39 165.2 129 60.5
CiPaw.09G038200 Carya illinoinensis HOM05D004387 ORTHO05D005218 3.4e-39 165.2 130 61.5
Rhsim09G0155500 Rhododendron simsii HOM05D004387 ORTHO05D005218 3.4e-39 165.2 132 59.8
Sabra06G0035900 Salix brachista HOM05D004387 ORTHO05D005218 4.5e-39 164.9 135 57.8
DCAR_013603 Daucus carota HOM05D004387 ORTHO05D005218 5.9e-39 164.5 121 65.3
TAR633G2397 Trochodendron aralioides HOM05D004387 ORTHO05D005218 5.9e-39 164.5 130 60.8
Actinidia38546 Actinidia chinensis HOM05D004387 ORTHO05D005218 7.7e-39 164.1 130 62.3
Duzib093G1767 Durio zibethinus HOM05D004387 ORTHO05D005218 1.0e-38 163.7 118 64.4
Thecc.05G153400 Theobroma cacao HOM05D004387 ORTHO05D005218 1.0e-38 163.7 130 59.2
MSTRG.10813 Avicennia marina HOM05D004387 ORTHO05D005218 1.7e-38 162.9 130 59.2
Aqoxy5G00267 Aquilegia oxysepala HOM05D004387 ORTHO05D005218 2.2e-38 162.5 130 58.5
Manes.08G050500 Manihot esculenta HOM05D004387 ORTHO05D005218 2.9e-38 162.2 130 59.2
Atru.chr1.1097 Acer truncatum HOM05D004387 ORTHO05D005218 3.8e-38 161.8 130 59.2
BNapus_Darmor_BZH_scaffold_155p00060 Brassica napus HOM05D004387 ORTHO05D005218 5.0e-38 161.4 128 58.6
C09p22030 Brassica napus HOM05D004387 ORTHO05D005218 5.0e-38 161.4 128 58.6
BolC9t55109H Brassica oleracea HOM05D004387 ORTHO05D005218 5.0e-38 161.4 128 58.6
Cfa016818 Carpinus fangiana HOM05D004387 ORTHO05D005218 5.0e-38 161.4 130 58.5
Migut.K00090 Erythranthe guttata HOM05D004387 ORTHO05D005218 5.0e-38 161.4 121 63.6
Gohir.D01G090600 Gossypium hirsutum HOM05D004387 ORTHO05D005218 6.5e-38 161.0 130 59.2
Potri.016G055600 Populus trichocarpa HOM05D004387 ORTHO05D005218 6.5e-38 161.0 130 58.5
Carub.0002s0514 Capsella rubella HOM05D004387 ORTHO05D005218 8.5e-38 160.6 130 58.5
BcaC04g22217 Brassica carinata HOM05D004387 ORTHO05D005218 1.1e-37 160.2 128 57.8
CARHR052860 Cardamine hirsuta HOM05D004387 ORTHO05D005218 1.1e-37 160.2 130 56.9
ClCG04G000130 Citrullus lanatus HOM05D004387 ORTHO05D005218 1.1e-37 160.2 121 62.0
HanXRQChr01g0008751 Helianthus annuus HOM05D004387 ORTHO05D005218 1.1e-37 160.2 117 67.5
A09p17690 Brassica napus HOM05D004387 ORTHO05D005218 1.4e-37 159.8 128 57.8
BraA09t37397Z Brassica rapa HOM05D004387 ORTHO05D005218 1.4e-37 159.8 128 57.8
CsaV3_4G011700 Cucumis sativus L. HOM05D004387 ORTHO05D005218 1.4e-37 159.8 121 61.2
Gohir.A02G158900 Gossypium hirsutum HOM05D004387 ORTHO05D005218 1.4e-37 159.8 130 59.2
MELO3C023136.2 Cucumis melo HOM05D004387 ORTHO05D005218 2.5e-37 159.1 121 61.2
Pp3c19_14820 Physcomitrium patens HOM05D004387 ORTHO05D005218 2.5e-37 159.1 129 60.5
Glyma.14G145600 Glycine max HOM05D004387 ORTHO05D005218 3.2e-37 158.7 130 56.9
Lsat_1_v5_gn_5_161440 Lactuca sativa HOM05D004387 ORTHO05D005218 3.2e-37 158.7 121 63.6
TWI74G1664 Tripterygium wilfordii HOM05D004387 ORTHO05D005218 3.2e-37 158.7 130 59.2
TWI77G0383 Tripterygium wilfordii HOM05D004387 ORTHO05D005218 3.2e-37 158.7 121 62.0
Gohir.A01G009000 Gossypium hirsutum HOM05D004387 ORTHO05D005218 4.2e-37 158.3 130 58.5
Lalb_Chr20g0110501 Lupinus albus HOM05D004387 ORTHO05D005218 4.2e-37 158.3 130 57.7
Sp2g04520 Schrenkiella parvula HOM05D004387 ORTHO05D005218 4.2e-37 158.3 125 59.2
vmacro09074 Vaccinium macrocarpon HOM05D004387 ORTHO05D005218 4.2e-37 158.3 121 62.0
Aa31LG2G10160 Aethionema arabicum HOM05D004387 ORTHO05D005218 5.5e-37 157.9 121 59.5
AL2G16570 Arabidopsis lyrata HOM05D004387 ORTHO05D005218 5.5e-37 157.9 130 56.9
HanXRQChr06g0178491 Helianthus annuus HOM05D004387 ORTHO05D005218 5.5e-37 157.9 117 66.7
Oeu017945.1 Olea europaea HOM05D004387 ORTHO05D005218 5.5e-37 157.9 130 58.5
Sed0012804 Sechium edule HOM05D004387 ORTHO05D005218 5.5e-37 157.9 121 61.2
COL.COLO4_28283 Corchorus olitorius HOM05D004387 ORTHO05D005218 7.2e-37 157.5 121 61.2
Potri.006G051200 Populus trichocarpa HOM05D004387 ORTHO05D005218 7.2e-37 157.5 130 57.7
RcHm_v2.0_Chr3g0482341 Rosa chinensis HOM05D004387 ORTHO05D005218 7.2e-37 157.5 130 58.5
Cc07_g20870 Coffea canephora HOM05D004387 ORTHO05D005218 9.4e-37 157.1 125 60.8
PSO170G6628 Papaver somniferum HOM05D004387 ORTHO05D005218 9.4e-37 157.1 127 58.3
PSO357G0544 Papaver somniferum HOM05D004387 ORTHO05D005218 1.2e-36 156.8 121 59.5
VMungo0331G1303 Vigna mungo HOM05D004387 ORTHO05D005218 1.6e-36 156.4 130 56.2
Ciclev10005512m.g Citrus clementina HOM05D004387 ORTHO05D005218 2.1e-36 156.0 130 56.2
Thhalv10023611m.g Eutrema salsugineum HOM05D004387 ORTHO05D005218 2.1e-36 156.0 123 57.7
Phvul.011G181200 Phaseolus vulgaris HOM05D004387 ORTHO05D005218 2.7e-36 155.6 121 60.3
SMO169G0201 Selaginella moellendorffii HOM05D004387 ORTHO05D005218 2.7e-36 155.6 121 59.5
GSVIVG01033276001 Vitis vinifera HOM05D004387 ORTHO05D005218 2.7e-36 155.6 122 62.3
AT1G60080 Arabidopsis thaliana HOM05D004387 ORTHO05D005218 3.6e-36 155.2 130 56.2
Glyma.08G246800 Glycine max HOM05D004387 ORTHO05D005218 4.7e-36 154.8 130 55.4
Lalb_Chr01g0017301 Lupinus albus HOM05D004387 ORTHO05D005218 4.7e-36 154.8 130 56.9
Aqoxy2G02875 Aquilegia oxysepala HOM05D004387 ORTHO05D005218 6.1e-36 154.5 130 56.9
CANSAT21G1698 Cannabis sativa HOM05D004387 ORTHO05D005218 6.1e-36 154.5 121 60.3
THA.LOC104823663 Tarenaya hassleriana HOM05D004387 ORTHO05D005218 6.1e-36 154.5 130 56.2
HPP92_019752 Vanilla planifolia HOM05D004387 ORTHO05D005218 7.9e-36 154.1 121 61.2
BcaB07g31201 Brassica carinata HOM05D004387 ORTHO05D005218 1.0e-35 153.7 119 58.8
Cc06_g17120 Coffea canephora HOM05D004387 ORTHO05D005218 1.0e-35 153.7 122 60.7
Peaxi162Scf00354g00222 Petunia axillaris HOM05D004387 ORTHO05D005218 1.8e-35 152.9 130 57.7
Lj6g0019382 Lotus japonicus HOM05D004387 ORTHO05D005218 3.9e-35 151.8 130 54.6
Hund05284 Selenicereus undatus HOM05D004387 ORTHO05D005218 3.9e-35 151.8 128 56.2
PGSC0003DMG400007507 Solanum tuberosum HOM05D004387 ORTHO05D005218 8.8e-35 150.6 130 54.6
AUR62024448 Chenopodium quinoa HOM05D004387 ORTHO05D005218 1.1e-34 150.2 130 55.4
MD12G1073800 Malus domestica HOM05D004387 ORTHO05D005218 1.1e-34 150.2 121 60.3
SGA_v2.0_scaffold94G28486 Striga asiatica HOM05D004387 ORTHO05D005218 1.1e-34 150.2 116 61.2
Eucgr.A00059 Eucalyptus grandis HOM05D004387 ORTHO05D005218 1.5e-34 149.8 118 58.5
Solyc06g075390.4 Solanum lycopersicum HOM05D004387 ORTHO05D005218 1.5e-34 149.8 130 54.6
Sopen06g031800 Solanum pennellii HOM05D004387 ORTHO05D005218 1.5e-34 149.8 130 54.6
EL10Ac3g07090 Beta vulgaris HOM05D004387 ORTHO05D005218 2.0e-34 149.4 134 52.2
AUR62026038 Chenopodium quinoa HOM05D004387 ORTHO05D005218 2.0e-34 149.4 130 55.4
Sopen10g030740 Solanum pennellii HOM05D004387 ORTHO05D005218 2.0e-34 149.4 130 55.4
CAN.G1001.5 Capsicum annuum HOM05D004387 ORTHO05D005218 2.6e-34 149.1 130 55.4
CAN.G128.9 Capsicum annuum HOM05D004387 ORTHO05D005218 2.6e-34 149.1 121 58.7
FAN02G2904 Fragaria x ananassa HOM05D004387 ORTHO05D005218 3.3e-34 148.7 129 56.6
CSS0010572 Camellia sinensis var. sinensis HOM05D004387 ORTHO05D005218 4.4e-34 148.3 142 52.8
CDE04G2438 Ceratophyllum demersum HOM05D004387 ORTHO05D005218 4.4e-34 148.3 121 61.2
FAN14G1242 Fragaria x ananassa HOM05D004387 ORTHO05D005218 4.4e-34 148.3 129 56.6
Nitab4.5_0009442g0010 Nicotiana tabacum HOM05D004387 ORTHO05D005218 4.4e-34 148.3 121 59.5
SGA_v2.0_scaffold273G46436 Striga asiatica HOM05D004387 ORTHO05D005218 4.4e-34 148.3 107 64.5
Nitab4.5_0004587g0010 Nicotiana tabacum HOM05D004387 ORTHO05D005218 5.7e-34 147.9 121 59.5
Ah.13g076470 Amaranthus hybridus HOM05D004387 ORTHO05D005218 7.4e-34 147.5 131 51.9
FvH4_6g23810 Fragaria vesca HOM05D004387 ORTHO05D005218 9.7e-34 147.1 130 56.2
Prupe.7G061000 Prunus persica HOM05D004387 ORTHO05D005218 9.7e-34 147.1 119 58.0
TPR.G24500 Trifolium pratense HOM05D004387 ORTHO05D005218 9.7e-34 147.1 121 56.2
Psat6g037480 Pisum sativum HOM05D004387 ORTHO05D005218 1.3e-33 146.7 121 56.2
FAN05G1657 Fragaria x ananassa HOM05D004387 ORTHO05D005218 1.7e-33 146.4 129 55.8
Ca_03365_v3 Cicer arietinum L. HOM05D004387 ORTHO05D005218 4.8e-33 144.8 135 52.6
CSS0027602 Camellia sinensis var. sinensis HOM05D004387 ORTHO05D005218 6.3e-33 144.4 130 59.2
Medtr1g007060 Medicago truncatula HOM05D004387 ORTHO05D005218 8.2e-33 144.1 121 55.4
Eucgr.A00267 Eucalyptus grandis HOM05D004387 ORTHO05D005218 3.1e-32 142.1 120 55.8
Nitab4.5_0005483g0010 Nicotiana tabacum HOM05D004387 ORTHO05D005218 5.3e-32 141.4 121 57.0
Eucgr.A00063 Eucalyptus grandis HOM05D004387 ORTHO05D005218 9.1e-32 140.6 113 55.8
Zm00001eb036840 Zea mays HOM05D004387 ORTHO05D005218 9.1e-32 140.6 121 56.2
PGR142G2016 Punica granatum HOM05D004387 ORTHO05D005218 1.5e-31 139.8 135 53.3
Zm00001eb317600 Zea mays HOM05D004387 ORTHO05D005218 1.5e-31 139.8 120 55.0
unitig_46.g18442 Utricularia gibba HOM05D004387 ORTHO05D005218 2.6e-31 139.0 156 47.4
CSS0024704 Camellia sinensis var. sinensis HOM05D004387 ORTHO05D005218 5.9e-31 137.9 120 57.5
Zm00001eb175450 Zea mays HOM05D004387 ORTHO05D005218 5.9e-31 137.9 123 54.5
CSS0001525 Camellia sinensis var. sinensis HOM05D004387 ORTHO05D005218 1.7e-30 136.3 100 68.0
FAN09G3586 Fragaria x ananassa HOM05D004387 ORTHO05D005218 6.5e-30 134.4 109 60.6
Eucgr.A00265 Eucalyptus grandis HOM05D004387 ORTHO05D005218 8.5e-30 134.0 120 54.2
Lj4g0008518 Lotus japonicus HOM05D004387 ORTHO05D005218 5.5e-29 131.3 102 59.8
Gorai.002G116000 Gossypium raimondii HOM05D004387 ORTHO05D005218 2.7e-28 129.0 133 51.1
Os11g0311300 Oryza sativa ssp. japonica HOM05D004387 ORTHO05D005218 4.7e-28 128.3 127 49.6
Cre10.g440900 Chlamydomonas reinhardtii HOM05D004387 ORTHO05D005218 1.0e-27 127.1 118 50.8
Gohir.D01G090850 Gossypium hirsutum HOM05D004387 ORTHO05D005218 1.4e-27 126.7 130 50.8
Cpa.g.sc3.336 Carica papaya HOM05D004387 ORTHO05D005218 3.0e-27 125.6 130 49.2
Zm00001eb161840 Zea mays HOM05D004387 ORTHO05D005218 9.7e-26 120.6 96 59.4
arahy.Tifrunner.gnm1.ann1.02RJAW Arachis hypogaea HOM05D004387 ORTHO05D005218 2.4e-24 115.9 93 57.0
arahy.Tifrunner.gnm1.ann1.QD816I Arachis hypogaea HOM05D004387 ORTHO05D005218 2.4e-24 115.9 93 57.0
Gohir.D01G090350 Gossypium hirsutum HOM05D004387 ORTHO05D005218 4.1e-24 115.2 93 58.1
Gorai.002G010400 Gossypium raimondii HOM05D004387 ORTHO05D005218 4.5e-23 111.7 90 58.9
Sc13g0001750 Simmondsia chinensis HOM05D004387 ORTHO05D005218 7.7e-23 110.9 91 60.4
CBR_g20981 Chara braunii HOM05D004387 ORTHO05D005218 1.4e-19 100.1 104 51.9
PGSC0003DMG400023725 Solanum tuberosum HOM05D004387 ORTHO05D005218 1.4e-19 100.1 79 60.8
Eucgr.A00069 Eucalyptus grandis HOM05D004387 ORTHO05D005218 1.3e-17 93.6 93 50.5
Haze_01634 Corylus avellana HOM05D004387 ORTHO05D005218 2.4e-16 89.4 70 58.6
Haze_19856 Corylus avellana HOM05D004387 ORTHO05D005218 4.5e-15 85.1 94 46.8
CBR_g41407 Chara braunii HOM05D004387 ORTHO05D005218 1.3e-14 83.6 78 53.8
Gohir.D01G008666 Gossypium hirsutum HOM05D004387 ORTHO05D005218 2.7e-12 75.9 59 59.3
Hma1.2p1_0953F.1_g241060 Hydrangea macrophylla HOM05D004387 ORTHO05D005218 2.7e-12 75.9 59 62.7
Eucgr.A00266 Eucalyptus grandis HOM05D004387 ORTHO05D005218 5.7e-10 68.2 118 33.9
EL10Ac3g05398 Beta vulgaris HOM05D004387 ORTHO05D005218 2.8e-09 65.9 58 51.7
CDE07G0852 Ceratophyllum demersum HOM05D004387 ORTHO05D005218 1.6e-07 60.1 53 54.7
Manes.03G101000 Manihot esculenta HOM05D002238 ORTHO05D001984 3.5e-07 58.9 99 32.3
Nn7g36292 Nelumbo nucifera HOM05D004387 ORTHO05D005218 3.5e-07 58.9 45 66.7
Potri.014G166200 Populus trichocarpa HOM05D002238 ORTHO05D001984 1.3e-06 57.0 97 32.0
AagrBONN_evm.TU.Sc2ySwM_228.3077 Anthoceros agrestis HOM05D004387 ORTHO05D005218 2.9e-06 55.8 56 51.8
SHI10149 Sapria himalayana HOM05D002238 ORTHO05D001984 3.8e-06 55.5 94 29.8
Solyc08g007520.4 Solanum lycopersicum HOM05D002238 ORTHO05D001984 3.8e-06 55.5 105 32.4
Sopen08g003480 Solanum pennellii HOM05D002238 ORTHO05D001984 3.8e-06 55.5 105 32.4
PGSC0003DMG400012510 Solanum tuberosum HOM05D002238 ORTHO05D001984 5.0e-06 55.1 105 32.4
ECA236G2666 Erigeron canadensis HOM05D002238 ORTHO05D001984 6.6e-06 54.7 103 28.2
CAN.G1394.37 Capsicum annuum HOM05D002238 ORTHO05D001984 8.6e-06 54.3 105 32.4
Ciclev10016158m.g Citrus clementina HOM05D002238 ORTHO05D001984 8.6e-06 54.3 98 30.6


User provided reference genes

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