Gene: Sopen08g003480

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen08g003480
  • Transcript Identifier Sopen08g003480.1
  • Gene Type Coding gene
  • Location Spenn-ch08 : 2279221-2280964 : negative

Gene Family Information

  • ID HOM05D002238
  • #Genes/#Species 301/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen08g003480.1

Descriptions

  • Description 3-5-exoribonuclease family protein | FUNCTIONS IN: 3-5-exoribonuclease activity, RNA binding | INVOLVED IN: RNA processing | LOCATED IN: cellular_component unknown | EXPRESSED IN: 21 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Exoribonuclease, phosphorolytic domain 2 , Exoribonuclease, phosphorolytic domain 1 , Ribosomal protein S5 domain 2-type fold | BEST Arabidopsis thaliana protein match is: ribonuclease PH45A
  • Loading (ortholog descriptions from ath)...

Functional Annotation

No GO associations found for this gene.
InterPro Description
IPR001247 Exoribonuclease, phosphorolytic domain 1
IPR027408 PNPase/RNase PH domain superfamily
IPR036345 Exoribonuclease, PH domain 2 superfamily
IPR015847 Exoribonuclease, phosphorolytic domain 2
IPR020568 Ribosomal protein S5 domain 2-type fold
Mapman id Description
16.4.1.1.3 RNA processing.RNA surveillance.exosome complex.EXO9 core complex.component RRP42