Gene: Sopen10g030740

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen10g030740
  • Transcript Identifier Sopen10g030740.1
  • Gene Type Coding gene
  • Location Spenn-ch10 : 78372986-78377211 : positive

Gene Family Information

  • ID HOM05D004387
  • #Genes/#Species 163/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen10g030740.1

Descriptions

  • Description 3-5-exoribonuclease family protein | FUNCTIONS IN: 3-5-exoribonuclease activity, RNA binding | INVOLVED IN: RNA processing | LOCATED IN: cellular_component unknown | EXPRESSED IN: 20 plant structures | EXPRESSED DURING: 12 growth stages | CONTAINS InterPro DOMAIN/s: Exoribonuclease, phosphorolytic domain 2 , Exoribonuclease, phosphorolytic domain 1 , Ribosomal protein S5 domain 2-type fold | BEST Arabidopsis thaliana protein match is: ribonuclease PH45A
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Functional Annotation

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT1G60080

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR020568 Ribosomal protein S5 domain 2-type fold
IPR036345 Exoribonuclease, PH domain 2 superfamily
IPR027408 PNPase/RNase PH domain superfamily
IPR015847 Exoribonuclease, phosphorolytic domain 2
IPR001247 Exoribonuclease, phosphorolytic domain 1
Mapman id Description
16.4.1.1.4 RNA processing.RNA surveillance.exosome complex.EXO9 core complex.component RRP43