Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_24540 Sequoiadendron giganteum HOM05D001007 ORTHO05D000001 4.4e-59 231.1 119 100.0
Migut.J00836 Erythranthe guttata HOM05D001007 ORTHO05D002932 5.7e-14 81.3 61 68.9
TAR383G0411 Trochodendron aralioides HOM05D001007 ORTHO05D002932 5.7e-14 81.3 61 67.2
GSVIVG01032255001 Vitis vinifera HOM05D001007 ORTHO05D002932 9.7e-14 80.5 61 65.6
Hma1.2p1_0263F.1_g105460 Hydrangea macrophylla HOM05D001007 ORTHO05D002932 1.7e-13 79.7 61 67.2
MSTRG.19396 Avicennia marina HOM05D001007 ORTHO05D002932 4.8e-13 78.2 61 63.9
SEGI_18754 Sequoiadendron giganteum HOM05D006301 ORTHO05D000646 4.8e-13 78.2 56 69.6
Dinv12607 Davidia involucrata HOM05D001007 ORTHO05D002932 6.3e-13 77.8 61 63.9
MBI16_g37217_MAGBIO Magnolia biondii HOM05D001007 ORTHO05D002932 6.3e-13 77.8 61 62.3
Nitab4.5_0005105g0010 Nicotiana tabacum HOM05D001007 ORTHO05D002932 6.3e-13 77.8 61 65.6
ATR0626G366 Amborella trichopoda HOM05D001007 ORTHO05D002932 1.1e-12 77.0 61 60.7
Aqoxy7G02671 Aquilegia oxysepala HOM05D001007 ORTHO05D002932 1.4e-12 76.6 61 60.7
Solyc05g047520.4 Solanum lycopersicum HOM05D001007 ORTHO05D002932 1.4e-12 76.6 61 63.9
Sopen05g027830 Solanum pennellii HOM05D001007 ORTHO05D002932 1.4e-12 76.6 61 63.9
PGSC0003DMG400013698 Solanum tuberosum HOM05D001007 ORTHO05D002932 1.4e-12 76.6 61 63.9
CAN.G106.8 Capsicum annuum HOM05D001007 ORTHO05D002932 1.8e-12 76.3 61 62.3
Cc00_g00180 Coffea canephora HOM05D001007 ORTHO05D002932 1.8e-12 76.3 61 63.9
CSS0018446 Camellia sinensis var. sinensis HOM05D001007 ORTHO05D002932 2.4e-12 75.9 61 60.7
Lju50A17G32 Lonicera japonica HOM05D001007 ORTHO05D002932 2.4e-12 75.9 61 62.3
vmacro22293 Vaccinium macrocarpon HOM05D001007 ORTHO05D002932 2.4e-12 75.9 61 62.3
Eucgr.C00066 Eucalyptus grandis HOM05D001007 ORTHO05D002932 5.3e-12 74.7 61 62.3
Nn5g27075 Nelumbo nucifera HOM05D001007 ORTHO05D002932 5.3e-12 74.7 61 62.3
Oeu028825.1 Olea europaea HOM05D001007 ORTHO05D002932 5.3e-12 74.7 61 62.3
CDE07G1513 Ceratophyllum demersum HOM05D001007 ORTHO05D002932 6.9e-12 74.3 61 60.7
Sc23g0004700 Simmondsia chinensis HOM05D001007 ORTHO05D002932 6.9e-12 74.3 61 62.3
MD16G1238700 Malus domestica HOM05D001007 ORTHO05D002932 1.2e-11 73.6 61 62.3
Rhsim07G0245200 Rhododendron simsii HOM05D001007 ORTHO05D002932 1.2e-11 73.6 61 59.0
Rhsim07G0245300 Rhododendron simsii HOM05D001007 ORTHO05D002932 1.2e-11 73.6 61 59.0
SalBow6G3558 Salvia bowleyana HOM05D001007 ORTHO05D002932 1.2e-11 73.6 61 60.7
Gohir.D13G185200 Gossypium hirsutum HOM05D001007 ORTHO05D002932 1.5e-11 73.2 61 62.3
CANSAT01G0746 Cannabis sativa HOM05D001007 ORTHO05D002932 2.0e-11 72.8 61 62.3
unitig_22.g6570 Utricularia gibba HOM05D001007 ORTHO05D002932 2.0e-11 72.8 61 60.7
Oeu062952.1 Olea europaea HOM05D001007 ORTHO05D002932 2.6e-11 72.4 61 60.7
THA.LOC104808911 Tarenaya hassleriana HOM05D001007 ORTHO05D002932 2.6e-11 72.4 61 62.3
Thecc.09G194800 Theobroma cacao HOM05D001007 ORTHO05D002932 2.6e-11 72.4 61 62.3
AT2G06990 Arabidopsis thaliana HOM05D001007 ORTHO05D002932 3.4e-11 72.0 61 63.9
Cfa020741 Carpinus fangiana HOM05D001007 ORTHO05D002932 3.4e-11 72.0 61 62.3
AUR62020712 Chenopodium quinoa HOM05D001007 ORTHO05D002932 3.4e-11 72.0 61 63.9
HanXRQChr12g0359191 Helianthus annuus HOM05D001007 ORTHO05D002932 3.4e-11 72.0 61 59.0
Lsat_1_v5_gn_5_81421 Lactuca sativa HOM05D001007 ORTHO05D002932 3.4e-11 72.0 61 60.7
ECA234G1918 Erigeron canadensis HOM05D001007 ORTHO05D002932 4.5e-11 71.6 61 59.0
AL3G43950 Arabidopsis lyrata HOM05D001007 ORTHO05D002932 5.9e-11 71.2 61 63.9
EL10Ac2g03639 Beta vulgaris HOM05D001007 ORTHO05D002932 5.9e-11 71.2 61 62.3
BcaC05g29692 Brassica carinata HOM05D001007 ORTHO05D002932 5.9e-11 71.2 61 62.3
A05p39390 Brassica napus HOM05D001007 ORTHO05D002932 5.9e-11 71.2 61 62.3
BraA05t22720Z Brassica rapa HOM05D001007 ORTHO05D002932 5.9e-11 71.2 61 62.3
Cpa.g.sc115.29 Carica papaya HOM05D001007 ORTHO05D002932 5.9e-11 71.2 61 60.7
AUR62028012 Chenopodium quinoa HOM05D001007 ORTHO05D002932 5.9e-11 71.2 61 63.9
Nitab4.5_0005753g0010 Nicotiana tabacum HOM05D001007 ORTHO05D002932 5.9e-11 71.2 61 60.7
RcHm_v2.0_Chr4g0397751 Rosa chinensis HOM05D001007 ORTHO05D002932 5.9e-11 71.2 61 60.7
HPP92_020237 Vanilla planifolia HOM05D001007 ORTHO05D002932 5.9e-11 71.2 61 57.4
Duzib170G0417 Durio zibethinus HOM05D001007 ORTHO05D002932 7.7e-11 70.9 61 60.7
MD13G1234200 Malus domestica HOM05D001007 ORTHO05D002932 7.7e-11 70.9 61 62.3
QL11p008827 Quercus lobata HOM05D001007 ORTHO05D002932 7.7e-11 70.9 61 60.7
HanXRQChr10g0309581 Helianthus annuus HOM05D001007 ORTHO05D002932 1.0e-10 70.5 61 59.0
Sp3g08000 Schrenkiella parvula HOM05D001007 ORTHO05D002932 1.0e-10 70.5 61 62.3
SMO358G0351 Selaginella moellendorffii HOM05D001007 ORTHO05D002932 1.0e-10 70.5 61 55.7
C05p58420 Brassica napus HOM05D001007 ORTHO05D002932 1.3e-10 70.1 61 62.3
BolC5t34494H Brassica oleracea HOM05D001007 ORTHO05D002932 1.3e-10 70.1 61 62.3
CARHR084080 Cardamine hirsuta HOM05D001007 ORTHO05D002932 1.3e-10 70.1 61 62.3
Haze_19057 Corylus avellana HOM05D001007 ORTHO05D002932 1.3e-10 70.1 61 60.7
Mapoly0044s0084 Marchantia polymorpha HOM05D001007 ORTHO05D002932 1.3e-10 70.1 61 59.0
Carub.0003s2734 Capsella rubella HOM05D001007 ORTHO05D002932 1.7e-10 69.7 61 62.3
Thhalv10019987m.g Eutrema salsugineum HOM05D001007 ORTHO05D002932 1.7e-10 69.7 61 62.3
FvH4_4g06170 Fragaria vesca HOM05D001007 ORTHO05D002932 2.2e-10 69.3 61 59.0
FAN12G0801 Fragaria x ananassa HOM05D001007 ORTHO05D002932 2.2e-10 69.3 61 59.0
FAN22G2217 Fragaria x ananassa HOM05D001007 ORTHO05D002932 2.2e-10 69.3 61 59.0
SEGI_07765 Sequoiadendron giganteum HOM05D007858 ORTHO05D000002 2.2e-10 69.3 58 63.8
Ciclev10018695m.g Citrus clementina HOM05D001007 ORTHO05D002932 3.8e-10 68.6 61 59.0
Potri.006G078000 Populus trichocarpa HOM05D001007 ORTHO05D002932 3.8e-10 68.6 61 60.7
Atru.chr12.1185 Acer truncatum HOM05D001007 ORTHO05D002932 5.0e-10 68.2 61 60.7
DCAR_009044 Daucus carota HOM05D001007 ORTHO05D002932 5.0e-10 68.2 61 55.7
Manes.18G138900 Manihot esculenta HOM05D001007 ORTHO05D002932 5.0e-10 68.2 61 59.0
Dinv26473 Davidia involucrata HOM05D001007 ORTHO05D002932 6.5e-10 67.8 61 57.4
Lalb_Chr05g0223741 Lupinus albus HOM05D001007 ORTHO05D002932 1.1e-09 67.0 61 60.7
PSO170G5833 Papaver somniferum HOM05D001007 ORTHO05D002932 1.1e-09 67.0 61 55.7
Pp3c10_7310 Physcomitrium patens HOM05D001007 ORTHO05D002932 1.1e-09 67.0 61 59.0
Sc23g0004350 Simmondsia chinensis HOM05D001007 ORTHO05D002932 1.1e-09 67.0 61 55.7
Ah.10g033670 Amaranthus hybridus HOM05D001007 ORTHO05D002932 1.4e-09 66.6 61 55.7
FAN07G1844 Fragaria x ananassa HOM05D001007 ORTHO05D002932 1.4e-09 66.6 61 57.4
Peaxi162Scf00006g03312 Petunia axillaris HOM05D001007 ORTHO05D002932 1.4e-09 66.6 61 55.7
Solyc12g017860.3 Solanum lycopersicum HOM05D001007 ORTHO05D002932 1.4e-09 66.6 61 57.4
Sopen12g008680 Solanum pennellii HOM05D001007 ORTHO05D002932 1.4e-09 66.6 61 57.4
Lj4g0027172 Lotus japonicus HOM05D001007 ORTHO05D002932 1.9e-09 66.2 61 55.7
Os11g0176200 Oryza sativa ssp. japonica HOM05D001007 ORTHO05D002932 1.9e-09 66.2 61 52.5
TWI32G0842 Tripterygium wilfordii HOM05D001007 ORTHO05D002932 1.9e-09 66.2 61 59.0
ClCG11G011450 Citrullus lanatus HOM05D001007 ORTHO05D002932 2.5e-09 65.9 61 55.7
MELO3C003935.2 Cucumis melo HOM05D001007 ORTHO05D002932 2.5e-09 65.9 61 55.7
PSO063G7144 Papaver somniferum HOM05D001007 ORTHO05D002932 2.5e-09 65.9 61 55.7
Lalb_Chr16g0390771 Lupinus albus HOM05D001007 ORTHO05D002932 3.2e-09 65.5 61 59.0
CsaV3_2G009040 Cucumis sativus L. HOM05D001007 ORTHO05D002932 4.2e-09 65.1 61 55.7
Sed0020596 Sechium edule HOM05D001007 ORTHO05D002932 4.2e-09 65.1 61 55.7
THA.LOC104815315 Tarenaya hassleriana HOM05D001007 ORTHO05D002932 7.2e-09 64.3 61 57.4
Glyma.08G027700 Glycine max HOM05D001007 ORTHO05D002932 1.6e-08 63.2 61 55.7
Hund19363 Selenicereus undatus HOM05D001007 ORTHO05D002932 1.6e-08 63.2 61 55.7
VMungo0251G0726 Vigna mungo HOM05D001007 ORTHO05D002932 1.6e-08 63.2 61 54.1
SHI03121 Sapria himalayana HOM05D000002 ORTHO05D000001 2.1e-08 62.8 61 55.7
Phvul.002G303000 Phaseolus vulgaris HOM05D001007 ORTHO05D002932 2.7e-08 62.4 61 52.5
Ca_17425_v3 Cicer arietinum L. HOM05D001007 ORTHO05D002932 3.6e-08 62.0 61 55.7
Ca_17434_v3 Cicer arietinum L. HOM05D001007 ORTHO05D002932 3.6e-08 62.0 61 55.7
AagrBONN_evm.TU.Sc2ySwM_117.4055 Anthoceros agrestis HOM05D001007 ORTHO05D002932 4.7e-08 61.6 61 50.8
arahy.Tifrunner.gnm1.ann1.612ZK0 Arachis hypogaea HOM05D001007 ORTHO05D002932 4.7e-08 61.6 61 57.4
arahy.Tifrunner.gnm1.ann1.N68NTR Arachis hypogaea HOM05D001007 ORTHO05D002932 4.7e-08 61.6 61 57.4
Medtr8g101340 Medicago truncatula HOM05D001007 ORTHO05D002932 4.7e-08 61.6 61 54.1
Psat7g021600 Pisum sativum HOM05D001007 ORTHO05D002932 4.7e-08 61.6 61 55.7
Actinidia38524 Actinidia chinensis HOM05D001007 ORTHO05D002932 7.9e-08 60.8 47 63.8
PGR142G2022 Punica granatum HOM05D001007 ORTHO05D002932 7.9e-08 60.8 48 62.5
PGSC0003DMG400020389 Solanum tuberosum HOM05D001007 ORTHO05D002932 7.9e-08 60.8 61 54.1
TPR.G25490 Trifolium pratense HOM05D001007 ORTHO05D002932 3.0e-07 58.9 61 52.5
Zm00001eb337140 Zea mays HOM05D001007 ORTHO05D002932 5.1e-07 58.2 61 49.2
Aa31sc441G20 Aethionema arabicum HOM05D001007 ORTHO05D002932 1.1e-06 57.0 49 59.2
Prupe.1G065000 Prunus persica HOM05D001007 ORTHO05D002932 4.4e-06 55.1 49 57.1
Medtr5g069360 Medicago truncatula HOM05D001007 ORTHO05D002932 7.4e-06 54.3 60 51.7


User provided reference genes

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