Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_23350 Sequoiadendron giganteum HOM05D004635 ORTHO05D005899 0.0e+00 1288.1 661 100.0
ATR0064G111 Amborella trichopoda HOM05D004635 ORTHO05D005899 1.6e-161 573.9 658 49.7
TAR636G1354 Trochodendron aralioides HOM05D004635 ORTHO05D005899 1.6e-153 547.4 659 48.9
Dinv38955 Davidia involucrata HOM05D004635 ORTHO05D005899 3.5e-153 546.2 653 46.1
Aqoxy5G04278 Aquilegia oxysepala HOM05D004635 ORTHO05D005899 5.9e-153 545.4 656 48.5
Nn1g02763 Nelumbo nucifera HOM05D004635 ORTHO05D005899 1.0e-152 544.7 684 45.6
Nn5g27546 Nelumbo nucifera HOM05D004635 ORTHO05D005899 1.7e-152 543.9 671 47.4
Duzib084G1397 Durio zibethinus HOM05D004635 ORTHO05D005899 2.2e-152 543.5 660 47.0
Gohir.D09G186900 Gossypium hirsutum HOM05D004635 ORTHO05D005899 5.0e-152 542.3 663 46.9
COL.COLO4_34438 Corchorus olitorius HOM05D004635 ORTHO05D005899 6.5e-152 542.0 664 47.3
Gohir.A09G192700 Gossypium hirsutum HOM05D004635 ORTHO05D005899 1.1e-151 541.2 663 46.6
Gorai.006G209700 Gossypium raimondii HOM05D004635 ORTHO05D005899 1.5e-151 540.8 663 46.8
Actinidia02016 Actinidia chinensis HOM05D004635 ORTHO05D005899 7.2e-151 538.5 663 46.9
MBI18_g19087_MAGBIO Magnolia biondii HOM05D004635 ORTHO05D005899 7.2e-151 538.5 665 47.1
Thecc.03G276500 Theobroma cacao HOM05D004635 ORTHO05D005899 7.2e-151 538.5 656 47.7
Hma1.2p1_0377F.1_g139240 Hydrangea macrophylla HOM05D004635 ORTHO05D005899 1.2e-150 537.7 658 46.2
PSO339G4625 Papaver somniferum HOM05D004635 ORTHO05D005899 2.7e-150 536.6 656 47.9
Prupe.5G097400 Prunus persica HOM05D004635 ORTHO05D005899 1.0e-149 534.6 669 46.0
SGA_v2.0_scaffold146G36254 Striga asiatica HOM05D004635 ORTHO05D005899 1.4e-149 534.3 666 46.4
PSO170G0760 Papaver somniferum HOM05D004635 ORTHO05D005899 3.0e-149 533.1 655 47.8
MD14G1101800 Malus domestica HOM05D004635 ORTHO05D005899 4.0e-149 532.7 659 47.3
RcHm_v2.0_Chr7g0211871 Rosa chinensis HOM05D004635 ORTHO05D005899 1.2e-148 531.2 665 47.1
MELO3C005661.2 Cucumis melo HOM05D004635 ORTHO05D005899 2.0e-148 530.4 666 47.0
vmacro11312 Vaccinium macrocarpon HOM05D004635 ORTHO05D005899 2.0e-148 530.4 644 47.5
PSO017G3139 Papaver somniferum HOM05D004635 ORTHO05D005899 2.6e-148 530.0 655 47.8
MSTRG.13840 Avicennia marina HOM05D004635 ORTHO05D005899 4.4e-148 529.3 625 46.6
Nitab4.5_0003907g0020 Nicotiana tabacum HOM05D004635 ORTHO05D005899 7.5e-148 528.5 633 48.2
CsaV3_5G002950 Cucumis sativus L. HOM05D004635 ORTHO05D005899 9.8e-148 528.1 677 45.9
FAN04G0694 Fragaria x ananassa HOM05D004635 ORTHO05D005899 9.8e-148 528.1 665 47.2
Peaxi162Scf00102g01512 Petunia axillaris HOM05D004635 ORTHO05D005899 9.8e-148 528.1 635 47.2
Cpa.g.sc202.13 Carica papaya HOM05D004635 ORTHO05D005899 1.3e-147 527.7 675 45.2
DCAR_000603 Daucus carota HOM05D004635 ORTHO05D005899 1.7e-147 527.3 661 44.6
CSS0019840 Camellia sinensis var. sinensis HOM05D004635 ORTHO05D005899 2.2e-147 526.9 660 47.7
PSO384G0809 Papaver somniferum HOM05D004635 ORTHO05D005899 3.7e-147 526.2 656 47.4
QL01p003129 Quercus lobata HOM05D004635 ORTHO05D005899 3.7e-147 526.2 642 47.4
CAN.G792.84 Capsicum annuum HOM05D004635 ORTHO05D005899 8.3e-147 525.0 631 48.3
FAN13G3179 Fragaria x ananassa HOM05D004635 ORTHO05D005899 1.4e-146 524.2 670 46.9
FAN18G0535 Fragaria x ananassa HOM05D004635 ORTHO05D005899 3.1e-146 523.1 668 47.2
Atru.chr9.2220 Acer truncatum HOM05D004635 ORTHO05D005899 4.1e-146 522.7 644 47.5
FvH4_5g23090 Fragaria vesca HOM05D004635 ORTHO05D005899 4.1e-146 522.7 665 47.2
FAN18G1690 Fragaria x ananassa HOM05D004635 ORTHO05D005899 4.1e-146 522.7 668 47.2
PGSC0003DMG400029793 Solanum tuberosum HOM05D004635 ORTHO05D005899 4.1e-146 522.7 643 46.8
Potri.003G124700 Populus trichocarpa HOM05D004635 ORTHO05D005899 5.4e-146 522.3 665 45.4
TAR629G3080 Trochodendron aralioides HOM05D004635 ORTHO05D005899 2.7e-145 520.0 642 47.0
AUR62017259 Chenopodium quinoa HOM05D004635 ORTHO05D005899 3.5e-145 519.6 661 46.0
ClCG01G002860 Citrullus lanatus HOM05D004635 ORTHO05D005899 5.9e-145 518.8 677 45.1
Manes.01G063000 Manihot esculenta HOM05D004635 ORTHO05D005899 5.9e-145 518.8 636 46.4
Ciclev10019281m.g Citrus clementina HOM05D004635 ORTHO05D005899 1.3e-144 517.7 663 46.9
Cc08_g14490 Coffea canephora HOM05D004635 ORTHO05D005899 1.3e-144 517.7 642 47.0
VMungo0251G2718 Vigna mungo HOM05D004635 ORTHO05D005899 1.3e-144 517.7 658 45.6
arahy.Tifrunner.gnm1.ann1.Y4HLQF Arachis hypogaea HOM05D004635 ORTHO05D005899 2.9e-144 516.5 657 44.6
GSVIVG01019776001 Vitis vinifera HOM05D004635 ORTHO05D005899 3.8e-144 516.2 658 44.1
Nitab4.5_0004836g0050 Nicotiana tabacum HOM05D004635 ORTHO05D005899 5.0e-144 515.8 633 46.3
Sabra03G0088200 Salix brachista HOM05D004635 ORTHO05D005899 5.0e-144 515.8 665 45.3
arahy.Tifrunner.gnm1.ann1.NB74KP Arachis hypogaea HOM05D004635 ORTHO05D005899 6.5e-144 515.4 656 45.1
HanXRQChr13g0416481 Helianthus annuus HOM05D004635 ORTHO05D005899 6.5e-144 515.4 629 47.9
PGR042G2640 Punica granatum HOM05D004635 ORTHO05D005899 6.5e-144 515.4 660 46.7
ECA240G4094 Erigeron canadensis HOM05D004635 ORTHO05D005899 3.2e-143 513.1 629 46.3
Phvul.002G288000 Phaseolus vulgaris HOM05D004635 ORTHO05D005899 5.5e-143 512.3 636 46.1
SalBow6G1328 Salvia bowleyana HOM05D004635 ORTHO05D005899 9.4e-143 511.5 659 45.4
Hund11485 Selenicereus undatus HOM05D004635 ORTHO05D005899 9.4e-143 511.5 680 44.0
AUR62010616 Chenopodium quinoa HOM05D004635 ORTHO05D005899 1.2e-142 511.1 642 46.3
arahy.Tifrunner.gnm1.ann1.BGY2GF Arachis hypogaea HOM05D004635 ORTHO05D005899 1.6e-142 510.8 665 44.8
arahy.Tifrunner.gnm1.ann1.MF5MQE Arachis hypogaea HOM05D004635 ORTHO05D005899 3.6e-142 509.6 663 44.5
EL10Ac5g12781 Beta vulgaris HOM05D004635 ORTHO05D005899 3.6e-142 509.6 662 45.8
Cfa012156 Carpinus fangiana HOM05D004635 ORTHO05D005899 3.6e-142 509.6 658 45.7
Haze_08871 Corylus avellana HOM05D004635 ORTHO05D005899 3.6e-142 509.6 658 45.3
EL10Ac1g00317 Beta vulgaris HOM05D004635 ORTHO05D005899 4.0e-141 506.1 663 45.7
TWI81G1014 Tripterygium wilfordii HOM05D004635 ORTHO05D005899 1.2e-140 504.6 633 46.1
Solyc08g007990.3 Solanum lycopersicum HOM05D004635 ORTHO05D005899 1.5e-140 504.2 641 47.1
Sopen08g003860 Solanum pennellii HOM05D004635 ORTHO05D005899 1.5e-140 504.2 638 47.2
Eucgr.E00572 Eucalyptus grandis HOM05D004635 ORTHO05D005899 2.0e-140 503.8 660 43.6
Glyma.08G013300 Glycine max HOM05D004635 ORTHO05D005899 2.6e-140 503.4 636 46.4
Lj6A677T80 Lonicera japonica HOM05D004635 ORTHO05D005899 3.4e-140 503.1 645 46.0
Lsat_1_v5_gn_6_87181 Lactuca sativa HOM05D004635 ORTHO05D005899 4.4e-140 502.7 629 44.4
Ca_17544_v3 Cicer arietinum L. HOM05D004635 ORTHO05D005899 5.7e-140 502.3 660 44.4
PGSC0003DMG400005819 Solanum tuberosum HOM05D004635 ORTHO05D005899 8.3e-139 498.4 643 46.2
THA.LOC104818064 Tarenaya hassleriana HOM05D004635 ORTHO05D005899 1.1e-138 498.0 668 44.3
Carub.0007s3429 Capsella rubella HOM05D004635 ORTHO05D005899 1.8e-138 497.3 667 44.7
TPR.G12861 Trifolium pratense HOM05D004635 ORTHO05D005899 1.8e-138 497.3 669 44.8
Aa31LG9G660 Aethionema arabicum HOM05D004635 ORTHO05D005899 9.2e-138 495.0 664 44.9
CANSAT78G0227 Cannabis sativa HOM05D004635 ORTHO05D005899 5.9e-137 492.3 661 44.6
AT5G41190 Arabidopsis thaliana HOM05D004635 ORTHO05D005899 2.3e-136 490.3 669 43.6
AL7G48240 Arabidopsis lyrata HOM05D004635 ORTHO05D005899 5.0e-136 489.2 680 44.0
Lj4g0017456 Lotus japonicus HOM05D004635 ORTHO05D005899 1.1e-135 488.0 623 45.1
Medtr8g098490 Medicago truncatula HOM05D004635 ORTHO05D005899 1.1e-135 488.0 669 43.2
FAN08G3353 Fragaria x ananassa HOM05D004635 ORTHO05D005899 2.5e-135 486.9 590 48.1
HPP92_020857 Vanilla planifolia HOM05D004635 ORTHO05D005899 3.6e-134 483.0 654 44.3
Sed0015372 Sechium edule HOM05D004635 ORTHO05D005899 1.2e-132 478.0 665 44.1
Psat7g034520 Pisum sativum HOM05D004635 ORTHO05D005899 2.0e-132 477.2 629 43.6
Sp7g00720 Schrenkiella parvula HOM05D004635 ORTHO05D005899 2.6e-132 476.9 669 43.0
SpUn0010_0200 Schrenkiella parvula HOM05D004635 ORTHO05D005899 2.6e-132 476.9 669 43.0
Lalb_Chr05g0224871 Lupinus albus HOM05D004635 ORTHO05D005899 9.8e-132 474.9 666 42.9
C04p48290 Brassica napus HOM05D004635 ORTHO05D005899 1.7e-131 474.2 672 43.9
RcHm_v2.0_Chr7g0179141 Rosa chinensis HOM05D004635 ORTHO05D005899 1.7e-131 474.2 661 44.2
BcaC02g08976 Brassica carinata HOM05D004635 ORTHO05D005899 3.7e-131 473.0 672 43.9
BolC4t26422H Brassica oleracea HOM05D004635 ORTHO05D005899 3.7e-131 473.0 672 43.9
BcaB06g27604 Brassica carinata HOM05D004635 ORTHO05D005899 6.4e-131 472.2 674 43.0
A04p14360 Brassica napus HOM05D004635 ORTHO05D005899 7.0e-130 468.8 674 43.6
A07p20710 Brassica napus HOM05D004635 ORTHO05D005899 9.2e-130 468.4 673 43.5
BraA04t17085Z Brassica rapa HOM05D004635 ORTHO05D005899 9.2e-130 468.4 674 43.6
BraA07t29762Z Brassica rapa HOM05D004635 ORTHO05D005899 1.2e-129 468.0 668 43.4
Thhalv10027696m.g Eutrema salsugineum HOM05D004635 ORTHO05D005899 5.6e-127 459.1 674 44.1
CDE06G0591 Ceratophyllum demersum HOM05D004635 ORTHO05D005899 2.4e-122 443.7 565 44.8
Os02g0114700 Oryza sativa ssp. japonica HOM05D004635 ORTHO05D005899 4.3e-119 433.0 634 41.5
CARHR213190 Cardamine hirsuta HOM05D004635 ORTHO05D005899 5.6e-119 432.6 662 41.5
Sed0018462 Sechium edule HOM05D004635 ORTHO05D005899 6.8e-117 425.6 557 44.2
BcaB02g07904 Brassica carinata HOM05D004635 ORTHO05D005899 7.5e-116 422.2 662 40.9
Zm00001eb209610 Zea mays HOM05D004635 ORTHO05D005899 2.7e-113 413.7 633 39.0
Glyma.05G206400 Glycine max HOM05D004635 ORTHO05D005899 4.6e-113 412.9 550 44.7
Oeu011058.1 Olea europaea HOM05D004635 ORTHO05D005899 6.0e-113 412.5 667 38.2
unitig_37.g12250 Utricularia gibba HOM05D004635 ORTHO05D005899 7.8e-113 412.1 630 41.4
CiPaw.11G137400 Carya illinoinensis HOM05D004635 ORTHO05D005899 3.0e-112 410.2 576 44.3
Pp3c2_34320 Physcomitrium patens HOM05D004635 ORTHO05D005899 2.5e-111 407.1 669 39.6
Thhalv10009994m.g Eutrema salsugineum HOM05D004635 ORTHO05D005899 6.2e-102 375.9 678 38.1
AagrBONN_evm.TU.Sc2ySwM_362.355 Anthoceros agrestis HOM05D004635 ORTHO05D005899 1.1e-101 375.2 683 38.2
Zm00001eb229850 Zea mays HOM05D004635 ORTHO05D005899 3.1e-101 373.6 561 41.2
BcaC08g44516 Brassica carinata HOM05D004635 ORTHO05D005899 2.2e-99 367.5 663 38.3
Sc01g0009470 Simmondsia chinensis HOM05D004635 ORTHO05D005899 2.6e-92 344.0 515 41.7
Actinidia14552 Actinidia chinensis HOM05D004635 ORTHO05D005899 1.3e-88 331.6 529 41.4
SMO171G0086 Selaginella moellendorffii HOM05D004635 ORTHO05D005899 2.0e-84 317.8 665 35.3
Carub.0004s0410 Capsella rubella HOM05D004635 ORTHO05D005899 3.4e-84 317.0 568 37.5
Migut.A00784 Erythranthe guttata HOM05D004635 ORTHO05D005899 2.5e-79 300.8 473 41.2
RcHm_v2.0_Chr7g0211921 Rosa chinensis HOM05D004635 ORTHO05D005899 3.2e-74 283.9 433 42.7
Mapoly0033s0014 Marchantia polymorpha HOM05D004635 ORTHO05D005899 1.6e-73 281.6 594 33.3
Dinv37658 Davidia involucrata HOM05D004635 ORTHO05D005899 3.0e-72 277.3 283 53.4
RcHm_v2.0_Chr2g0099081 Rosa chinensis HOM05D004635 ORTHO05D005899 1.7e-67 261.5 571 32.9
CDE05G1698 Ceratophyllum demersum HOM05D004635 ORTHO05D005899 6.5e-67 259.6 450 37.1
C06p19650 Brassica napus HOM05D004635 ORTHO05D005899 1.6e-65 255.0 386 39.4
CBR_g50931 Chara braunii HOM05D004635 ORTHO05D005899 4.6e-65 253.4 772 29.0
BolC6t37157H Brassica oleracea HOM05D004635 ORTHO05D005899 3.0e-64 250.8 242 53.3
FAN26G1714 Fragaria x ananassa HOM05D004635 ORTHO05D005899 3.4e-60 237.3 369 42.5
FAN28G2416 Fragaria x ananassa HOM05D004635 ORTHO05D005899 3.4e-60 237.3 369 42.5
Dinv37657 Davidia involucrata HOM05D004635 ORTHO05D005899 1.1e-55 222.2 254 46.9
BolC6t37158H Brassica oleracea HOM05D004635 ORTHO05D005899 1.8e-53 214.9 261 49.0
RcHm_v2.0_Chr7g0211961 Rosa chinensis HOM05D004635 ORTHO05D005899 1.1e-45 189.1 216 47.2
BcaC08g44514 Brassica carinata HOM05D004635 ORTHO05D005899 7.0e-45 186.4 148 57.4
MCO14G249 Micromonas commoda HOM05D004635 ORTHO05D005899 1.2e-41 175.6 626 26.0
C09p58220 Brassica napus HOM05D000111 ORTHO05D000134 6.7e-40 169.9 304 39.1
PRCOL_00006831 Prasinoderma coloniale HOM05D004635 ORTHO05D005899 1.3e-38 165.6 628 26.1
BolC9t58686H Brassica oleracea HOM05D004635 ORTHO05D005899 2.8e-38 164.5 431 32.7
BcaC04g18687 Brassica carinata HOM05D004635 ORTHO05D005899 8.2e-38 162.9 431 32.7
C06p19660 Brassica napus HOM05D004635 ORTHO05D005899 4.0e-32 144.1 156 50.6
Cre01.g031750 Chlamydomonas reinhardtii HOM05D004635 ORTHO05D005899 5.2e-32 143.7 601 26.8
VMungo1127G2192 Vigna mungo HOM05D004635 ORTHO05D005899 1.2e-25 122.5 177 40.1
QL12p018319 Quercus lobata HOM05D004635 ORTHO05D005899 4.9e-22 110.5 89 59.6
Solyc12g015770.3 Solanum lycopersicum HOM05D000074 ORTHO05D001262 3.8e-19 100.9 60 73.3
BcaC08g44517 Brassica carinata HOM05D004635 ORTHO05D005899 2.3e-16 91.7 283 31.8
EL10Ac8g19215 Beta vulgaris HOM05D000238 ORTHO05D001043 2.4e-13 81.6 83 51.8
Lj2C188G12 Lonicera japonica HOM05D004635 ORTHO05D005899 1.4e-08 65.9 176 29.0
EL10Ac5g10794 Beta vulgaris HOM05D004635 ORTHO05D005899 8.9e-08 63.2 70 51.4
Lj2C188G13 Lonicera japonica HOM05D004635 ORTHO05D005899 4.9e-06 57.4 64 46.9


User provided reference genes

Program Settings