Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_17125 Sequoiadendron giganteum HOM05D005460 ORTHO05D008059 1.4e-147 526.6 264 100.0
QL10p020708 Quercus lobata HOM05D005460 ORTHO05D008059 1.7e-44 184.1 155 63.9
Migut.I00363 Erythranthe guttata HOM05D005460 ORTHO05D008059 2.4e-43 180.3 155 61.9
MBI16_g07042_MAGBIO Magnolia biondii HOM05D005460 ORTHO05D008059 1.6e-42 177.6 154 61.0
TAR629G3051 Trochodendron aralioides HOM05D005460 ORTHO05D008059 1.6e-42 177.6 155 61.3
Oeu005512.2 Olea europaea HOM05D005460 ORTHO05D008059 2.6e-42 176.8 155 61.9
Ca_02783_v3 Cicer arietinum L. HOM05D005460 ORTHO05D008059 3.5e-42 176.4 154 58.4
Dinv07972 Davidia involucrata HOM05D005460 ORTHO05D008059 3.5e-42 176.4 155 61.9
Lj9A438G54 Lonicera japonica HOM05D005460 ORTHO05D008059 7.7e-42 175.3 149 61.7
PSO478G1652 Papaver somniferum HOM05D005460 ORTHO05D008059 7.7e-42 175.3 155 60.6
MSTRG.22948 Avicennia marina HOM05D005460 ORTHO05D008059 1.3e-41 174.5 155 60.0
TPR.G14357 Trifolium pratense HOM05D005460 ORTHO05D008059 2.2e-41 173.7 154 57.8
CiPaw.15G113700 Carya illinoinensis HOM05D005460 ORTHO05D008059 6.5e-41 172.2 155 60.0
SGA_v2.0_scaffold25G10948 Striga asiatica HOM05D005460 ORTHO05D008059 6.5e-41 172.2 154 58.4
Hma1.2p1_2037F.1_g311980 Hydrangea macrophylla HOM05D005460 ORTHO05D008059 8.5e-41 171.8 153 59.5
Psat1g126760 Pisum sativum HOM05D005460 ORTHO05D008059 8.5e-41 171.8 154 57.8
VMungo1309G0936 Vigna mungo HOM05D005460 ORTHO05D008059 8.5e-41 171.8 154 57.8
CSS0025897 Camellia sinensis var. sinensis HOM05D005460 ORTHO05D008059 1.1e-40 171.4 155 60.6
Lj1g0006842 Lotus japonicus HOM05D005460 ORTHO05D008059 1.1e-40 171.4 154 58.4
Manes.06G081200 Manihot esculenta HOM05D005460 ORTHO05D008059 1.5e-40 171.0 154 59.7
Duzib068G0250 Durio zibethinus HOM05D005460 ORTHO05D008059 1.9e-40 170.6 155 60.0
Cpa.g.sc3.237 Carica papaya HOM05D005460 ORTHO05D008059 2.5e-40 170.2 154 58.4
Hund09954 Selenicereus undatus HOM05D005460 ORTHO05D008059 2.5e-40 170.2 154 59.7
Cfa017734 Carpinus fangiana HOM05D005460 ORTHO05D008059 3.2e-40 169.9 155 58.7
Haze_18509 Corylus avellana HOM05D005460 ORTHO05D008059 3.2e-40 169.9 155 58.7
GSVIVG01008151001 Vitis vinifera HOM05D005460 ORTHO05D008059 3.2e-40 169.9 155 60.0
Phvul.009G203700 Phaseolus vulgaris HOM05D005460 ORTHO05D008059 4.2e-40 169.5 154 57.1
Thecc.03G107700 Theobroma cacao HOM05D005460 ORTHO05D008059 4.2e-40 169.5 151 60.3
Actinidia04798 Actinidia chinensis HOM05D005460 ORTHO05D008059 5.5e-40 169.1 154 58.4
arahy.Tifrunner.gnm1.ann1.LBS82T Arachis hypogaea HOM05D005460 ORTHO05D008059 1.2e-39 167.9 154 57.1
Glyma.06G206000 Glycine max HOM05D005460 ORTHO05D008059 1.2e-39 167.9 154 55.8
HanXRQChr09g0270461 Helianthus annuus HOM05D005460 ORTHO05D008059 1.2e-39 167.9 155 58.1
Nn3g17530 Nelumbo nucifera HOM05D005460 ORTHO05D008059 1.2e-39 167.9 155 59.4
COL.COLO4_27492 Corchorus olitorius HOM05D005460 ORTHO05D008059 1.6e-39 167.5 155 59.4
Gohir.D11G037400 Gossypium hirsutum HOM05D005460 ORTHO05D008059 1.6e-39 167.5 155 58.1
BcaB08g37287 Brassica carinata HOM05D005460 ORTHO05D008059 2.1e-39 167.2 155 58.7
A10p28560 Brassica napus HOM05D005460 ORTHO05D008059 2.1e-39 167.2 155 58.7
Ciclev10018555m.g Citrus clementina HOM05D005460 ORTHO05D008059 2.1e-39 167.2 155 59.4
Medtr2g461560 Medicago truncatula HOM05D005460 ORTHO05D008059 2.1e-39 167.2 154 57.1
Gorai.007G040200 Gossypium raimondii HOM05D005460 ORTHO05D008059 2.7e-39 166.8 155 58.1
Nitab4.5_0002467g0140 Nicotiana tabacum HOM05D005460 ORTHO05D008059 2.7e-39 166.8 155 58.7
Ah.11g047430 Amaranthus hybridus HOM05D005460 ORTHO05D008059 3.6e-39 166.4 167 56.3
arahy.Tifrunner.gnm1.ann1.N0CKJ9 Arachis hypogaea HOM05D005460 ORTHO05D008059 3.6e-39 166.4 154 56.5
Cc04_g08300 Coffea canephora HOM05D005460 ORTHO05D008059 3.6e-39 166.4 155 58.7
Gohir.A11G034000 Gossypium hirsutum HOM05D005460 ORTHO05D008059 3.6e-39 166.4 153 58.2
Nitab4.5_0005994g0060 Nicotiana tabacum HOM05D005460 ORTHO05D008059 3.6e-39 166.4 155 58.1
ATR0827G052 Amborella trichopoda HOM05D005460 ORTHO05D008059 4.7e-39 166.0 155 58.7
Lsat_1_v5_gn_4_113721 Lactuca sativa HOM05D005460 ORTHO05D008059 8.0e-39 165.2 154 55.8
BolC9t59631H Brassica oleracea HOM05D005460 ORTHO05D008059 1.0e-38 164.9 155 58.1
BraA10t44905Z Brassica rapa HOM05D005460 ORTHO05D008059 1.8e-38 164.1 155 58.1
Prupe.5G209800 Prunus persica HOM05D005460 ORTHO05D008059 1.8e-38 164.1 155 58.1
C09p68840 Brassica napus HOM05D005460 ORTHO05D008059 2.3e-38 163.7 155 58.1
Thhalv10012480m.g Eutrema salsugineum HOM05D005460 ORTHO05D008059 2.3e-38 163.7 155 58.7
Solyc03g114780.3 Solanum lycopersicum HOM05D005460 ORTHO05D008059 3.0e-38 163.3 155 57.4
Peaxi162Scf00017g03272 Petunia axillaris HOM05D005460 ORTHO05D008059 4.0e-38 162.9 156 57.1
Sopen03g033860 Solanum pennellii HOM05D005460 ORTHO05D008059 5.2e-38 162.5 155 56.8
THA.LOC104818356 Tarenaya hassleriana HOM05D005460 ORTHO05D008059 5.2e-38 162.5 155 57.4
Aa31LG3G18430 Aethionema arabicum HOM05D005460 ORTHO05D008059 6.7e-38 162.2 154 58.4
MD14G1216300 Malus domestica HOM05D005460 ORTHO05D008059 8.8e-38 161.8 154 54.5
TWI60G0358 Tripterygium wilfordii HOM05D005460 ORTHO05D008059 8.8e-38 161.8 154 57.8
TWI60G1488 Tripterygium wilfordii HOM05D005460 ORTHO05D008059 8.8e-38 161.8 154 57.8
AL6G18480 Arabidopsis lyrata HOM05D005460 ORTHO05D008059 2.0e-37 160.6 154 57.8
AT5G08110 Arabidopsis thaliana HOM05D005460 ORTHO05D008059 2.0e-37 160.6 159 56.0
HPP92_007735 Vanilla planifolia HOM05D005460 ORTHO05D008059 2.6e-37 160.2 153 55.6
Carub.0006s0699 Capsella rubella HOM05D005460 ORTHO05D008059 3.3e-37 159.8 152 58.6
Aqoxy3G00547_Aqoxy3G00548 Aquilegia oxysepala HOM05D005460 ORTHO05D008059 4.4e-37 159.5 149 58.4
AUR62039669 Chenopodium quinoa HOM05D005460 ORTHO05D008059 5.7e-37 159.1 148 58.1
Eucgr.K02548 Eucalyptus grandis HOM05D005460 ORTHO05D008059 5.7e-37 159.1 155 56.8
Potri.012G063500 Populus trichocarpa HOM05D005460 ORTHO05D008059 5.7e-37 159.1 155 58.1
CANSAT80G0202 Cannabis sativa HOM05D005460 ORTHO05D008059 1.7e-36 157.5 149 54.4
Sed0020336 Sechium edule HOM05D005460 ORTHO05D008059 1.7e-36 157.5 154 54.5
Lalb_Chr11g0071861 Lupinus albus HOM05D005460 ORTHO05D008059 2.8e-36 156.8 154 55.8
ClCG06G015450 Citrullus lanatus HOM05D005460 ORTHO05D008059 8.2e-36 155.2 155 53.5
RcHm_v2.0_Chr7g0183711 Rosa chinensis HOM05D005460 ORTHO05D008059 8.2e-36 155.2 149 56.4
Zm00001eb327130 Zea mays HOM05D005460 ORTHO05D008059 8.2e-36 155.2 164 49.4
CsaV3_1G003350 Cucumis sativus L. HOM05D005460 ORTHO05D008059 2.4e-35 153.7 149 55.0
MELO3C017248.2 Cucumis melo HOM05D005460 ORTHO05D008059 3.1e-35 153.3 149 55.7
FAN08G0483 Fragaria x ananassa HOM05D005460 ORTHO05D008059 4.1e-35 152.9 149 56.4
FvH4_5g13410 Fragaria vesca HOM05D005460 ORTHO05D008059 5.3e-35 152.5 149 56.4
FAN18G2313 Fragaria x ananassa HOM05D005460 ORTHO05D008059 5.3e-35 152.5 149 56.4
SEGI_40089 Sequoiadendron giganteum HOM05D005460 ORTHO05D008059 5.3e-35 152.5 93 84.9
FAN13G3146 Fragaria x ananassa HOM05D005460 ORTHO05D008059 7.0e-35 152.1 149 56.4
Sp6g34850 Schrenkiella parvula HOM05D005460 ORTHO05D008059 7.0e-35 152.1 155 54.8
AagrBONN_evm.TU.Sc2ySwM_344.3544 Anthoceros agrestis HOM05D005460 ORTHO05D008059 9.1e-35 151.8 164 52.4
ECA232G2972 Erigeron canadensis HOM05D005460 ORTHO05D008059 9.1e-35 151.8 155 54.2
SHI17427 Sapria himalayana HOM05D005460 ORTHO05D008059 2.0e-34 150.6 154 55.8
EL10Ac5g11188 Beta vulgaris HOM05D005460 ORTHO05D008059 4.5e-34 149.4 148 55.4
Sc04g0003880 Simmondsia chinensis HOM05D005460 ORTHO05D008059 1.3e-33 147.9 155 54.2
Pp3c5_22230 Physcomitrium patens HOM05D005460 ORTHO05D008059 2.2e-33 147.1 146 53.4
PGR031G2062 Punica granatum HOM05D005460 ORTHO05D008059 1.5e-32 144.4 155 52.3
vmacro17637 Vaccinium macrocarpon HOM05D005460 ORTHO05D008059 3.2e-32 143.3 137 52.6
Os02g0111900 Oryza sativa ssp. japonica HOM05D005460 ORTHO05D008059 2.7e-31 140.2 148 49.3
CBR_g50975 Chara braunii HOM05D005460 ORTHO05D008059 1.0e-30 138.3 148 52.7
Prupe.5G209300 Prunus persica HOM05D005460 ORTHO05D008059 1.0e-30 138.3 151 53.6
AUR62032136 Chenopodium quinoa HOM05D005460 ORTHO05D008059 6.8e-30 135.6 152 51.3
Rhsim08G0141800 Rhododendron simsii HOM05D005460 ORTHO05D008059 2.4e-27 127.1 191 44.0
QL01p024738 Quercus lobata HOM05D005460 ORTHO05D008059 1.0e-25 121.7 100 63.0
MCO09G659 Micromonas commoda HOM05D005460 ORTHO05D008059 1.1e-19 101.7 121 49.6
Pp3c7_15450 Physcomitrium patens HOM05D005460 ORTHO05D008059 1.4e-19 101.3 148 36.5
Pp3c7_15456 Physcomitrium patens HOM05D005460 ORTHO05D008059 1.4e-19 101.3 148 36.5
Pp3s405_10 Physcomitrium patens HOM05D005460 ORTHO05D008059 9.2e-19 98.6 148 39.2
AagrBONN_evm.TU.Sc2ySwM_344.4214 Anthoceros agrestis HOM05D005460 ORTHO05D008059 2.0e-18 97.4 145 39.3
SEGI_12628 Sequoiadendron giganteum HOM05D005460 ORTHO05D008059 3.8e-17 93.2 57 77.2
Cre03.g187700 Chlamydomonas reinhardtii HOM05D005460 ORTHO05D008059 5.7e-13 79.3 124 39.5
MCO07G109 Micromonas commoda HOM05D005460 ORTHO05D008059 5.7e-13 79.3 166 34.9
Psat7g070520 Pisum sativum HOM05D005460 ORTHO05D008059 1.2e-10 71.6 91 44.0
PRCOL_00000536 Prasinoderma coloniale HOM05D005460 ORTHO05D008059 5.9e-10 69.3 186 29.6


User provided reference genes

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