Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_15522 Sequoiadendron giganteum HOM05D000216 ORTHO05D000634 1.4e-51 206.1 107 100.0
EL10As12g24016 Beta vulgaris HOM05D000216 ORTHO05D001131 6.9e-19 97.4 97 57.7
Eucgr.K02695 Eucalyptus grandis HOM05D000216 ORTHO05D000634 1.5e-18 96.3 97 56.7
AUR62030122 Chenopodium quinoa HOM05D000216 ORTHO05D000634 2.6e-18 95.5 97 56.7
PGR111G0086 Punica granatum HOM05D000216 ORTHO05D000634 2.6e-18 95.5 97 56.7
HanXRQChr00c0601g0576531 Helianthus annuus HOM05D000216 ORTHO05D000634 5.8e-18 94.4 103 53.4
HanXRQChr08g0210181 Helianthus annuus HOM05D000216 ORTHO05D000634 5.8e-18 94.4 103 53.4
HanXRQChr11g0326611 Helianthus annuus HOM05D000216 ORTHO05D000634 5.8e-18 94.4 103 53.4
HanXRQCPg0579801 Helianthus annuus HOM05D000216 ORTHO05D001131 5.8e-18 94.4 103 53.4
Lalb_Chr09g0335361 Lupinus albus HOM05D000216 ORTHO05D000634 5.8e-18 94.4 97 56.7
Hund03956 Selenicereus undatus HOM05D000216 ORTHO05D000634 5.8e-18 94.4 97 54.6
Hund25862 Selenicereus undatus HOM05D000216 ORTHO05D000634 5.8e-18 94.4 97 54.6
Hund27560 Selenicereus undatus HOM05D000216 ORTHO05D000634 5.8e-18 94.4 97 54.6
Hund27610 Selenicereus undatus HOM05D000216 ORTHO05D000634 5.8e-18 94.4 97 54.6
Hund27866 Selenicereus undatus HOM05D000216 ORTHO05D000634 5.8e-18 94.4 97 54.6
Hund27917 Selenicereus undatus HOM05D000216 ORTHO05D000634 5.8e-18 94.4 97 54.6
Hund27996 Selenicereus undatus HOM05D000216 ORTHO05D000634 5.8e-18 94.4 97 54.6
Hund28277 Selenicereus undatus HOM05D000216 ORTHO05D000634 5.8e-18 94.4 97 54.6
Hund28387 Selenicereus undatus HOM05D000216 ORTHO05D000634 5.8e-18 94.4 97 54.6
Hund28559 Selenicereus undatus HOM05D000216 ORTHO05D000634 5.8e-18 94.4 97 54.6
Hund28793 Selenicereus undatus HOM05D000216 ORTHO05D000634 5.8e-18 94.4 97 54.6
Hund29352 Selenicereus undatus HOM05D000216 ORTHO05D000634 5.8e-18 94.4 97 54.6
Hund29740 Selenicereus undatus HOM05D000216 ORTHO05D000634 5.8e-18 94.4 97 54.6
vmacro22403 Vaccinium macrocarpon HOM05D000216 ORTHO05D000634 5.8e-18 94.4 97 55.7
Atru.chr2.3403 Acer truncatum HOM05D000216 ORTHO05D000634 7.6e-18 94.0 97 55.7
arahy.Tifrunner.gnm1.ann1.N383GM Arachis hypogaea HOM05D000216 ORTHO05D000634 7.6e-18 94.0 97 56.7
LjContig00489g0015528 Lotus japonicus HOM05D000216 ORTHO05D000634 7.6e-18 94.0 104 51.9
Medtr0002s0510 Medicago truncatula HOM05D000216 ORTHO05D001131 9.9e-18 93.6 97 54.6
PSO548G0073 Papaver somniferum HOM05D000216 ORTHO05D000634 9.9e-18 93.6 97 55.7
Ah.10g027600 Amaranthus hybridus HOM05D000216 ORTHO05D000634 1.7e-17 92.8 97 55.7
Ah.10g027800 Amaranthus hybridus HOM05D000216 ORTHO05D000634 1.7e-17 92.8 97 55.7
Ah.10g028500 Amaranthus hybridus HOM05D000216 ORTHO05D000634 1.7e-17 92.8 97 55.7
RcHm_v2.0_CPg0502411 Rosa chinensis HOM05D000216 ORTHO05D000634 2.2e-17 92.4 97 55.7
Lsat_1_v5_gn_1_6760 Lactuca sativa HOM05D003214 ORTHO05D004330 2.9e-17 92.0 103 52.4
Lsat_1_v5_gn_4_51820 Lactuca sativa HOM05D000216 ORTHO05D009870 2.9e-17 92.0 103 52.4
Lsat_1_v5_gn_5_26601 Lactuca sativa HOM05D000216 ORTHO05D000634 2.9e-17 92.0 103 52.4
Medtr4g051120 Medicago truncatula HOM05D000216 ORTHO05D000634 2.9e-17 92.0 97 55.7
unitig_91.g26496 Utricularia gibba HOM05D000216 ORTHO05D000634 2.9e-17 92.0 99 54.5
ATR0187G001 Amborella trichopoda HOM05D000216 ORTHO05D000634 3.8e-17 91.7 97 55.7
ATCG00170 Arabidopsis thaliana HOM05D000216 ORTHO05D000634 3.8e-17 91.7 97 55.7
BNapus_Darmor_BZH_scaffold_253p00060 Brassica napus HOM05D000216 ORTHO05D000634 3.8e-17 91.7 97 55.7
BraSC140t45598Z Brassica rapa HOM05D000216 ORTHO05D000634 3.8e-17 91.7 97 55.7
BraSC58t46405Z Brassica rapa HOM05D000216 ORTHO05D000634 3.8e-17 91.7 97 55.7
AUR62030170 Chenopodium quinoa HOM05D000216 ORTHO05D000634 3.8e-17 91.7 98 55.1
CsaV3_UNG207810 Cucumis sativus L. HOM05D000216 ORTHO05D000634 3.8e-17 91.7 97 54.6
Hma1.2p1_0414F.1_g147670 Hydrangea macrophylla HOM05D000216 ORTHO05D000634 3.8e-17 91.7 97 54.6
Potri.013G140260 Populus trichocarpa HOM05D000216 ORTHO05D000634 3.8e-17 91.7 97 55.7
SabraPtG0001000 Salix brachista HOM05D000216 ORTHO05D000634 3.8e-17 91.7 97 55.7
AUR62021208 Chenopodium quinoa HOM05D000216 ORTHO05D000634 4.9e-17 91.3 97 54.6
Zm00001eb314280 Zea mays HOM05D000216 ORTHO05D000634 4.9e-17 91.3 97 51.5
Zm00001eb435270 Zea mays HOM05D000216 ORTHO05D000634 4.9e-17 91.3 97 51.5
Zm00001eb435480 Zea mays HOM05D000216 ORTHO05D000634 4.9e-17 91.3 97 51.5
Zm00001eb436830 Zea mays HOM05D000216 ORTHO05D000634 4.9e-17 91.3 97 51.5
Zm00001eb437260 Zea mays HOM05D000216 ORTHO05D000634 4.9e-17 91.3 97 51.5
CAN.G1180.14 Capsicum annuum HOM05D000216 ORTHO05D000634 6.4e-17 90.9 97 54.6
CAN.G1648.10 Capsicum annuum HOM05D000216 ORTHO05D000634 6.4e-17 90.9 97 54.6
CDE07G0287 Ceratophyllum demersum HOM05D003429 ORTHO05D003873 6.4e-17 90.9 97 54.6
Peaxi162Scf00379g00084 Petunia axillaris HOM05D000216 ORTHO05D000634 6.4e-17 90.9 97 54.6
PGSC0003DMG400017664 Solanum tuberosum HOM05D000216 ORTHO05D000634 6.4e-17 90.9 97 53.6
CiPaw.12G031000 Carya illinoinensis HOM05D000216 ORTHO05D000634 8.4e-17 90.5 97 55.7
Lj2C1239G21 Lonicera japonica HOM05D000216 ORTHO05D000634 8.4e-17 90.5 97 54.6
Medtr7g116700 Medicago truncatula HOM05D000216 ORTHO05D000634 8.4e-17 90.5 97 54.6
Psat2g044360 Pisum sativum HOM05D000216 ORTHO05D000634 8.4e-17 90.5 98 56.1
SalBow1G4778 Salvia bowleyana HOM05D000216 ORTHO05D001131 8.4e-17 90.5 97 54.6
Sc07g0006590 Simmondsia chinensis HOM05D000216 ORTHO05D000634 8.4e-17 90.5 97 54.6
Solyc00g500052.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 1.1e-16 90.1 97 53.6
Solyc00g500135.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 1.1e-16 90.1 97 53.6
Solyc00g500205.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 1.1e-16 90.1 97 53.6
Solyc00g500290.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 1.1e-16 90.1 97 53.6
Solyc00g500319.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 1.1e-16 90.1 97 53.6
CAN.G612.1 Capsicum annuum HOM05D000216 ORTHO05D000634 1.9e-16 89.4 98 54.1
RhsimPtG0004600 Rhododendron simsii HOM05D000743 ORTHO05D000580 1.9e-16 89.4 97 52.6
DCAR_032474 Daucus carota HOM05D000216 ORTHO05D000634 2.4e-16 89.0 97 54.6
Psat5g134640 Pisum sativum HOM05D000216 ORTHO05D000634 3.2e-16 88.6 97 54.6
LjContig00318g0011041 Lotus japonicus HOM05D000216 ORTHO05D000634 4.2e-16 88.2 97 53.6
SGA_v2.0_scaffold119G32689 Striga asiatica HOM05D000216 ORTHO05D000634 5.5e-16 87.8 97 53.6
Manes.01G046800 Manihot esculenta HOM05D000216 ORTHO05D000634 2.1e-15 85.9 97 52.6
Sed0025233 Sechium edule HOM05D000216 ORTHO05D001131 2.1e-15 85.9 97 52.6
CAN.G213.14 Capsicum annuum HOM05D000216 ORTHO05D000634 4.6e-15 84.7 94 52.1
SGA_v2.0_scaffold477G52216 Striga asiatica HOM05D000216 ORTHO05D000634 4.6e-15 84.7 97 51.5
Hund12594 Selenicereus undatus HOM05D000216 ORTHO05D000634 6.7e-14 80.9 100 44.0
Migut.D01340 Erythranthe guttata HOM05D000216 ORTHO05D000634 8.7e-14 80.5 87 52.9
SMO086G0013 Selaginella moellendorffii HOM05D000216 ORTHO05D000634 2.5e-13 79.0 98 45.9
Pp3c7_4990 Physcomitrium patens HOM05D000216 ORTHO05D000634 2.1e-12 75.9 58 63.8
Sed0000813 Sechium edule HOM05D000216 ORTHO05D000634 4.8e-12 74.7 97 48.5
Oeu012802.1 Olea europaea HOM05D000216 ORTHO05D000634 1.8e-11 72.8 81 51.9
Hund15943 Selenicereus undatus HOM05D000216 ORTHO05D000634 5.3e-11 71.2 97 47.4
Gohir.D12G094332 Gossypium hirsutum HOM05D000216 ORTHO05D000634 2.0e-10 69.3 98 46.9
EL10Ac3g05558 Beta vulgaris HOM05D000216 ORTHO05D000634 3.4e-10 68.6 97 44.3
Gorai.013G017900 Gossypium raimondii HOM05D000216 ORTHO05D000634 5.8e-10 67.8 84 47.6
HanXRQChr00c0313g0573461 Helianthus annuus HOM05D000216 ORTHO05D000634 1.7e-09 66.2 77 49.4
Psat4g062520 Pisum sativum HOM05D000216 ORTHO05D003518 1.7e-09 66.2 100 45.0
Glyma.02G221400 Glycine max HOM05D000216 ORTHO05D000634 8.4e-09 63.9 87 42.5
QL93p0837_0001 Quercus lobata HOM05D000216 ORTHO05D000634 8.4e-09 63.9 71 50.7
CAN.G939.13 Capsicum annuum HOM05D000216 ORTHO05D000634 1.1e-08 63.5 77 48.1
BolSC45t60937H Brassica oleracea HOM05D000216 ORTHO05D000634 1.4e-08 63.2 76 48.7
Gohir.A05G086066 Gossypium hirsutum HOM05D000216 ORTHO05D000634 1.4e-08 63.2 71 52.1
Gorai.008G102500 Gossypium raimondii HOM05D000216 ORTHO05D000634 3.2e-08 62.0 98 43.9
Migut.D01414 Erythranthe guttata HOM05D000216 ORTHO05D000634 5.5e-08 61.2 51 62.7
AUR62041877 Chenopodium quinoa HOM05D000216 ORTHO05D000634 9.3e-08 60.5 73 47.9
Nitab4.5_0001761g0220 Nicotiana tabacum HOM05D000216 ORTHO05D000634 1.2e-07 60.1 70 47.1
Migut.F01072 Erythranthe guttata HOM05D000216 ORTHO05D000634 2.1e-07 59.3 64 50.0
Gohir.D01G206650 Gossypium hirsutum HOM05D000216 ORTHO05D000634 7.9e-07 57.4 97 41.2
Medtr7g069560 Medicago truncatula HOM05D000216 ORTHO05D000634 7.9e-07 57.4 97 42.3
Sc11g0005800 Simmondsia chinensis HOM05D000216 ORTHO05D000634 1.3e-06 56.6 71 47.9
Medtr5g098620 Medicago truncatula HOM05D000216 ORTHO05D000634 3.9e-06 55.1 53 54.7
Sed0017787 Sechium edule HOM05D000216 ORTHO05D000634 5.1e-06 54.7 97 42.3


User provided reference genes

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