Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_14206 Sequoiadendron giganteum HOM05D002199 ORTHO05D007829 1.2e-126 456.4 226 100.0
Mapoly0103s0058 Marchantia polymorpha HOM05D002199 ORTHO05D007829 6.3e-22 108.6 110 52.7
Pp3c8_22650 Physcomitrium patens HOM05D002199 ORTHO05D007829 1.4e-21 107.5 110 56.4
Aqoxy5G01396 Aquilegia oxysepala HOM05D002199 ORTHO05D007829 5.9e-20 102.1 110 52.7
MSTRG.18164 Avicennia marina HOM05D002199 ORTHO05D007829 5.9e-20 102.1 110 51.8
Eucgr.K03466 Eucalyptus grandis HOM05D002199 ORTHO05D007829 1.3e-19 100.9 110 51.8
PRCOL_00003998 Prasinoderma coloniale HOM05D002199 ORTHO05D007829 1.3e-19 100.9 116 52.6
SMO116G0380 Selaginella moellendorffii HOM05D002199 ORTHO05D007829 1.3e-19 100.9 110 50.0
vmacro02462 Vaccinium macrocarpon HOM05D002199 ORTHO05D007829 1.7e-19 100.5 125 48.0
Cpa.g.sc9.220 Carica papaya HOM05D002199 ORTHO05D007829 2.9e-19 99.8 110 50.9
MD11G1305800 Malus domestica HOM05D002199 ORTHO05D007829 2.9e-19 99.8 110 51.8
ATR0796G058 Amborella trichopoda HOM05D002199 ORTHO05D007829 3.8e-19 99.4 110 50.9
CSS0027670 Camellia sinensis var. sinensis HOM05D002199 ORTHO05D007829 5.0e-19 99.0 110 49.1
SalBow3G3296 Salvia bowleyana HOM05D002199 ORTHO05D007829 5.0e-19 99.0 109 49.5
GSVIVG01027985001 Vitis vinifera HOM05D002199 ORTHO05D007829 5.0e-19 99.0 110 51.8
Prupe.8G259200 Prunus persica HOM05D002199 ORTHO05D007829 6.5e-19 98.6 110 50.9
Oeu011451.1 Olea europaea HOM05D002199 ORTHO05D007829 8.5e-19 98.2 110 51.8
Sc17g0003960 Simmondsia chinensis HOM05D002199 ORTHO05D007829 8.5e-19 98.2 110 50.0
Glyma.02G155200 Glycine max HOM05D002199 ORTHO05D007829 1.1e-18 97.8 110 52.7
Oeu011450.1 Olea europaea HOM05D002199 ORTHO05D007829 1.1e-18 97.8 109 52.3
CiPaw.08G096900 Carya illinoinensis HOM05D002199 ORTHO05D007829 1.5e-18 97.4 110 49.1
Ca_10349_v3 Cicer arietinum L. HOM05D002199 ORTHO05D007829 1.5e-18 97.4 109 50.5
Cc01_g20720 Coffea canephora HOM05D002199 ORTHO05D007829 1.5e-18 97.4 110 48.2
FAN27G3300 Fragaria x ananassa HOM05D002199 ORTHO05D007829 1.5e-18 97.4 109 51.4
RcHm_v2.0_Chr6g0293721 Rosa chinensis HOM05D002199 ORTHO05D007829 1.5e-18 97.4 109 51.4
Haze_04909 Corylus avellana HOM05D002199 ORTHO05D007829 1.9e-18 97.1 110 50.0
ECA248G0237 Erigeron canadensis HOM05D002199 ORTHO05D007829 1.9e-18 97.1 110 50.0
Migut.D00202 Erythranthe guttata HOM05D002199 ORTHO05D007829 1.9e-18 97.1 109 50.5
FAN20G0797 Fragaria x ananassa HOM05D002199 ORTHO05D007829 1.9e-18 97.1 186 36.6
Lj2C1191T9 Lonicera japonica HOM05D002199 ORTHO05D007829 1.9e-18 97.1 110 47.3
Lj5g0020775 Lotus japonicus HOM05D002199 ORTHO05D007829 1.9e-18 97.1 114 48.2
QL12p026673 Quercus lobata HOM05D002199 ORTHO05D007829 1.9e-18 97.1 110 50.0
QL12p027267 Quercus lobata HOM05D002199 ORTHO05D007829 1.9e-18 97.1 110 50.0
HPP92_011379 Vanilla planifolia HOM05D002199 ORTHO05D007829 1.9e-18 97.1 110 52.7
EL10Ac1g01828 Beta vulgaris HOM05D002199 ORTHO05D007829 2.5e-18 96.7 151 41.1
PGR044G1196 Punica granatum HOM05D002199 ORTHO05D007829 2.5e-18 96.7 110 50.0
Actinidia24339 Actinidia chinensis HOM05D002199 ORTHO05D007829 3.2e-18 96.3 110 50.9
FAN15G0019 Fragaria x ananassa HOM05D002199 ORTHO05D007829 3.2e-18 96.3 109 50.5
Peaxi162Scf00001ggene001 Petunia axillaris HOM05D002199 ORTHO05D007829 3.2e-18 96.3 110 50.0
Atru.chr5.1171 Acer truncatum HOM05D002199 ORTHO05D007829 4.2e-18 95.9 110 50.0
CANSAT25G0223 Cannabis sativa HOM05D002199 ORTHO05D007829 4.2e-18 95.9 110 50.0
CANSAT25G3595 Cannabis sativa HOM05D002199 ORTHO05D007829 4.2e-18 95.9 110 50.0
DCAR_012390 Daucus carota HOM05D002199 ORTHO05D007829 4.2e-18 95.9 113 48.7
Duzib138G0111 Durio zibethinus HOM05D002199 ORTHO05D007829 4.2e-18 95.9 110 48.2
FAN24G3312 Fragaria x ananassa HOM05D002199 ORTHO05D007829 4.2e-18 95.9 109 50.5
Lsat_1_v5_gn_5_190601 Lactuca sativa HOM05D002199 ORTHO05D007829 4.2e-18 95.9 110 48.2
Lalb_Chr06g0163421 Lupinus albus HOM05D002199 ORTHO05D007829 4.2e-18 95.9 132 46.2
PSO832G1552 Papaver somniferum HOM05D002199 ORTHO05D007829 4.2e-18 95.9 110 50.9
arahy.Tifrunner.gnm1.ann1.Y4MBDE Arachis hypogaea HOM05D002199 ORTHO05D007829 5.5e-18 95.5 110 47.3
Dinv33041 Davidia involucrata HOM05D002199 ORTHO05D007829 5.5e-18 95.5 110 49.1
Sopen09g029810 Solanum pennellii HOM05D002199 ORTHO05D007829 5.5e-18 95.5 110 49.1
TWI59G1395 Tripterygium wilfordii HOM05D002199 ORTHO05D007829 9.4e-18 94.7 110 50.0
unitig_0.g1175 Utricularia gibba HOM05D002199 ORTHO05D007829 9.4e-18 94.7 110 50.9
Zm00001eb183500 Zea mays HOM05D002199 ORTHO05D007829 9.4e-18 94.7 110 49.1
CAN.G339.22 Capsicum annuum HOM05D002199 ORTHO05D007829 1.2e-17 94.4 110 49.1
AUR62008658 Chenopodium quinoa HOM05D002199 ORTHO05D007829 1.2e-17 94.4 110 49.1
AUR62044353 Chenopodium quinoa HOM05D002199 ORTHO05D007829 1.2e-17 94.4 110 49.1
Ciclev10018899m.g Citrus clementina HOM05D002199 ORTHO05D007829 1.2e-17 94.4 110 49.1
COL.COLO4_23367 Corchorus olitorius HOM05D002199 ORTHO05D007829 1.2e-17 94.4 110 49.1
HanXRQChr13g0413191 Helianthus annuus HOM05D002199 ORTHO05D007829 1.2e-17 94.4 110 47.3
Nn4g25822 Nelumbo nucifera HOM05D002199 ORTHO05D007829 1.2e-17 94.4 110 50.0
Solyc09g074990.4 Solanum lycopersicum HOM05D002199 ORTHO05D007829 1.2e-17 94.4 110 48.2
Nitab4.5_0001756g0160 Nicotiana tabacum HOM05D002199 ORTHO05D007829 1.6e-17 94.0 109 47.7
Nitab4.5_0002469g0020 Nicotiana tabacum HOM05D002199 ORTHO05D007829 1.6e-17 94.0 110 47.3
AL6G50600 Arabidopsis lyrata HOM05D002199 ORTHO05D007829 2.1e-17 93.6 110 50.9
AUR62033110 Chenopodium quinoa HOM05D002199 ORTHO05D007829 2.1e-17 93.6 110 49.1
Psat6g165880 Pisum sativum HOM05D002199 ORTHO05D007829 2.1e-17 93.6 110 46.4
Rhsim13G0011500 Rhododendron simsii HOM05D002199 ORTHO05D007829 2.1e-17 93.6 110 48.2
Thecc.01G298000 Theobroma cacao HOM05D002199 ORTHO05D007829 2.1e-17 93.6 110 49.1
Medtr1g088720 Medicago truncatula HOM05D002199 ORTHO05D007829 2.7e-17 93.2 110 49.1
FvH4_2g25510 Fragaria vesca HOM05D002199 ORTHO05D007829 3.6e-17 92.8 109 49.5
Gohir.A12G131400 Gossypium hirsutum HOM05D002199 ORTHO05D007829 3.6e-17 92.8 110 48.2
Gohir.D12G135300 Gossypium hirsutum HOM05D002199 ORTHO05D007829 3.6e-17 92.8 110 48.2
Gorai.008G146300 Gossypium raimondii HOM05D002199 ORTHO05D007829 3.6e-17 92.8 110 48.2
Carub.0006s3467 Capsella rubella HOM05D002199 ORTHO05D007829 4.7e-17 92.4 110 50.0
ClCG09G005970 Citrullus lanatus HOM05D002199 ORTHO05D007829 4.7e-17 92.4 110 50.0
CsaV3_7G029150 Cucumis sativus L. HOM05D002199 ORTHO05D007829 4.7e-17 92.4 110 49.1
Thhalv10028404m.g Eutrema salsugineum HOM05D002199 ORTHO05D007829 1.8e-16 90.5 110 50.0
Phvul.007G144100 Phaseolus vulgaris HOM05D002199 ORTHO05D007829 1.8e-16 90.5 110 46.4
TAR365G1115 Trochodendron aralioides HOM05D002199 ORTHO05D007829 1.8e-16 90.5 110 47.3
BcaB05g23636 Brassica carinata HOM05D002199 ORTHO05D007829 2.3e-16 90.1 110 49.1
BcaC03g16128 Brassica carinata HOM05D002199 ORTHO05D007829 3.0e-16 89.7 110 49.1
A02p24750 Brassica napus HOM05D002199 ORTHO05D007829 3.0e-16 89.7 110 49.1
C02p39050 Brassica napus HOM05D002199 ORTHO05D007829 3.0e-16 89.7 110 49.1
BolC2t09915H Brassica oleracea HOM05D002199 ORTHO05D007829 3.0e-16 89.7 110 49.1
BraA02t07461Z Brassica rapa HOM05D002199 ORTHO05D007829 3.0e-16 89.7 110 49.1
Os02g0592300 Oryza sativa ssp. japonica HOM05D002199 ORTHO05D007829 3.0e-16 89.7 110 47.3
Aa31LG5G2100 Aethionema arabicum HOM05D002199 ORTHO05D007829 4.0e-16 89.4 108 49.1
Sp6g02370 Schrenkiella parvula HOM05D002199 ORTHO05D007829 5.2e-16 89.0 110 48.2
Potri.014G130800 Populus trichocarpa HOM05D002199 ORTHO05D007829 6.8e-16 88.6 110 46.4
TPR.G34015 Trifolium pratense HOM05D002199 ORTHO05D007829 1.5e-15 87.4 110 45.5
Nitab4.5_0013887g0020 Nicotiana tabacum HOM05D002199 ORTHO05D007829 2.6e-15 86.7 102 47.1
CBR_g46895 Chara braunii HOM05D002199 ORTHO05D007829 5.7e-15 85.5 140 37.1
Sabra14G0097300 Salix brachista HOM05D002199 ORTHO05D007829 9.8e-15 84.7 116 44.8
Nitab4.5_0005515g0020 Nicotiana tabacum HOM05D002199 ORTHO05D007829 1.3e-14 84.3 102 46.1
THA.LOC104801271 Tarenaya hassleriana HOM05D002199 ORTHO05D007829 3.7e-14 82.8 110 44.5
arahy.Tifrunner.gnm1.ann1.9JI5AA Arachis hypogaea HOM05D002199 ORTHO05D007829 9.1e-13 78.2 94 46.8
VMungo0720G0513 Vigna mungo HOM05D002199 ORTHO05D007829 5.0e-11 72.4 109 45.0
MCO14G224 Micromonas commoda HOM05D002199 ORTHO05D007829 1.5e-10 70.9 108 45.4
AagrBONN_evm.TU.Sc2ySwM_117.2165 Anthoceros agrestis HOM05D002199 ORTHO05D007829 1.2e-09 67.8 51 51.0
Cfa027213 Carpinus fangiana HOM05D002199 ORTHO05D007829 3.6e-09 66.2 133 36.1
SGA_v2.0_scaffold2G01402 Striga asiatica HOM05D002199 ORTHO05D007829 4.7e-09 65.9 46 60.9
Lsat_1_v5_gn_1_106020 Lactuca sativa HOM05D002199 ORTHO05D036435 2.2e-06 57.0 46 54.3


User provided reference genes

Program Settings