Gene: Pp3c8_22650

General Information

Structural Information

  • Species Physcomitrium patens
  • Gene Identifier Pp3c8_22650
  • Transcript Identifier Pp3c8_22650V3.3
  • Gene Type Coding gene
  • Location Chr08 : 15639761-15645211 : negative

Gene Family Information

  • ID HOM05D002199
  • #Genes/#Species 305/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name Pp3c8_22650V3.3
  • pacid 32963496
  • alias Phpat.008G085500
  • alias Phypa_155569
  • alias Pp1s474_7V6
  • uniprot A0A2K1K8F7

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000398
ISO
PLAZA Homology (enrichment)mRNA splicing, via spliceosome HOM05D002199
GO:0006396
ISO
PLAZA Homology (enrichment)RNA processing HOM05D002199
GO:0048316
ISO
PLAZA Integrative Orthologyseed development AT4G02460
GO:0009555
ISO
PLAZA Integrative Orthologypollen development AT4G02460
GO:0006310
ISO
PLAZA Integrative OrthologyDNA recombination AT4G02460
GO:0000956
ISO
PLAZA Homology (enrichment)nuclear-transcribed mRNA catabolic process HOM05D002199
GO:0010154
ISO
PLAZA Integrative Orthologyfruit development AT4G02460
GO:0006298
IBA
IEA
GOA Databasemismatch repair
GO:0006298
IEA
InterPromismatch repair
GO:0006974
IEA
GOA Databasecellular response to DNA damage stimulus

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005524
IEA
GOA DatabaseATP binding
GO:0005524
IEA
InterProATP binding
GO:0030983
IEA
GOA Databasemismatched DNA binding
GO:0030983
IEA
InterPromismatched DNA binding
GO:0016887
IEA
InterProATP hydrolysis activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0032389
IBA
GOA DatabaseMutLalpha complex
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT4G02460
GO:0032300
IBA
IEA
GOA Databasemismatch repair complex
GO:0032300
IEA
InterPromismatch repair complex

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR037198 MutL, C-terminal domain superfamily
IPR014790 MutL, C-terminal, dimerisation
IPR036890 Histidine kinase/HSP90-like ATPase superfamily
IPR013507 DNA mismatch repair protein, S5 domain 2-like
IPR038973 DNA mismatch repair protein MutL/Mlh/Pms
IPR042121 MutL, C-terminal domain, regulatory subdomain
IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup
IPR002099 DNA mismatch repair protein family, N-terminal
IPR020568 Ribosomal protein S5 domain 2-type fold
IPR042120 MutL, C-terminal domain, dimerisation subdomain
Mapman id Description
14.7.2.2 DNA damage response.mismatch repair (MMR).MLH1-PMS1 heterodimer.component PMS1