Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_00747 Sequoiadendron giganteum HOM05D003934 ORTHO05D005108 6.3e-60 233.8 110 100.0
SEGI_09691 Sequoiadendron giganteum HOM05D003934 ORTHO05D005108 6.3e-60 233.8 110 100.0
SEGI_36975 Sequoiadendron giganteum HOM05D003934 ORTHO05D005108 8.0e-55 216.9 110 95.5
SEGI_13482 Sequoiadendron giganteum HOM05D003934 ORTHO05D005108 1.9e-48 195.7 103 91.3
Mapoly0116s0041 Marchantia polymorpha HOM05D003934 ORTHO05D005108 6.0e-34 147.5 105 64.8
ATR0602G008 Amborella trichopoda HOM05D003934 ORTHO05D005108 3.9e-33 144.8 104 65.4
CDE10G0188 Ceratophyllum demersum HOM05D003934 ORTHO05D005108 4.0e-30 134.8 100 64.0
Pp3c5_21100 Physcomitrium patens HOM05D003934 ORTHO05D005108 6.8e-30 134.0 104 59.6
Nn3g19008 Nelumbo nucifera HOM05D003934 ORTHO05D005108 8.9e-30 133.7 103 64.1
CDE10G0405 Ceratophyllum demersum HOM05D003934 ORTHO05D005108 4.9e-28 127.9 100 62.0
TAR375G0202 Trochodendron aralioides HOM05D003934 ORTHO05D005108 4.1e-27 124.8 103 60.2
Lsat_1_v5_gn_9_58300 Lactuca sativa HOM05D003934 ORTHO05D005108 9.2e-27 123.6 104 52.9
Thecc.03G196100 Theobroma cacao HOM05D003934 ORTHO05D005108 9.2e-27 123.6 109 55.0
arahy.Tifrunner.gnm1.ann1.W6P66N Arachis hypogaea HOM05D003934 ORTHO05D005108 1.2e-26 123.2 100 56.0
Psat5g078160 Pisum sativum HOM05D003934 ORTHO05D005108 1.2e-26 123.2 109 56.9
arahy.Tifrunner.gnm1.ann1.WX46MS Arachis hypogaea HOM05D003934 ORTHO05D005108 1.6e-26 122.9 100 56.0
Hma1.2p1_1188F.1_g265250 Hydrangea macrophylla HOM05D003934 ORTHO05D005108 1.6e-26 122.9 100 59.0
AagrBONN_evm.TU.Sc2ySwM_368.1804 Anthoceros agrestis HOM05D003934 ORTHO05D005108 2.1e-26 122.5 99 56.6
Duzib205G1942 Durio zibethinus HOM05D003934 ORTHO05D005108 2.1e-26 122.5 101 57.4
AUR62019377 Chenopodium quinoa HOM05D003934 ORTHO05D005108 4.6e-26 121.3 108 51.9
COL.COLO4_11261 Corchorus olitorius HOM05D003934 ORTHO05D005108 4.6e-26 121.3 101 58.4
EL10Ac3g05301 Beta vulgaris HOM05D003934 ORTHO05D005108 6.0e-26 120.9 108 49.1
Gohir.D09G179100 Gossypium hirsutum HOM05D003934 ORTHO05D005108 7.8e-26 120.6 109 53.2
Gorai.006G201100 Gossypium raimondii HOM05D003934 ORTHO05D005108 7.8e-26 120.6 109 53.2
Gohir.D11G243500 Gossypium hirsutum HOM05D003934 ORTHO05D005108 1.0e-25 120.2 109 53.2
Gorai.007G258600 Gossypium raimondii HOM05D003934 ORTHO05D005108 1.0e-25 120.2 109 53.2
HPP92_021551 Vanilla planifolia HOM05D003934 ORTHO05D005108 1.0e-25 120.2 108 51.9
Actinidia34211 Actinidia chinensis HOM05D003934 ORTHO05D005108 1.3e-25 119.8 103 55.3
CANSAT11G0158 Cannabis sativa HOM05D003934 ORTHO05D005108 1.3e-25 119.8 100 56.0
Duzib068G1159 Durio zibethinus HOM05D003934 ORTHO05D005108 1.7e-25 119.4 101 55.4
Gohir.A09G184300 Gossypium hirsutum HOM05D003934 ORTHO05D005108 2.3e-25 119.0 109 53.2
Ciclev10004777m.g Citrus clementina HOM05D003934 ORTHO05D005108 3.0e-25 118.6 100 55.0
Gohir.A11G232300 Gossypium hirsutum HOM05D003934 ORTHO05D005108 3.0e-25 118.6 109 53.2
Lj1C1015T5 Lonicera japonica HOM05D003934 ORTHO05D005108 3.0e-25 118.6 109 55.0
Manes.06G159600 Manihot esculenta HOM05D003934 ORTHO05D005108 3.0e-25 118.6 101 56.4
AUR62006111 Chenopodium quinoa HOM05D003934 ORTHO05D005108 3.9e-25 118.2 108 50.9
SGA_v2.0_scaffold44G16789 Striga asiatica HOM05D003934 ORTHO05D005108 3.9e-25 118.2 100 55.0
HPP92_021541 Vanilla planifolia HOM05D003934 ORTHO05D005108 5.1e-25 117.9 108 50.9
Lj1g0022752 Lotus japonicus HOM05D003934 ORTHO05D005108 6.6e-25 117.5 100 55.0
Sc25g0000870 Simmondsia chinensis HOM05D003934 ORTHO05D005108 6.6e-25 117.5 100 54.0
HanXRQChr09g0252981 Helianthus annuus HOM05D003934 ORTHO05D005108 1.5e-24 116.3 104 51.0
GSVIVG01038711001 Vitis vinifera HOM05D003934 ORTHO05D005108 1.5e-24 116.3 100 54.0
CsaV3_3G027880 Cucumis sativus L. HOM05D003934 ORTHO05D005108 1.9e-24 115.9 103 52.4
Phvul.009G053700 Phaseolus vulgaris HOM05D003934 ORTHO05D005108 1.9e-24 115.9 100 54.0
TPR.G17291 Trifolium pratense HOM05D003934 ORTHO05D005108 1.9e-24 115.9 109 54.1
Hund11672 Selenicereus undatus HOM05D003934 ORTHO05D005108 2.5e-24 115.5 108 49.1
Peaxi162Scf00550g00530 Petunia axillaris HOM05D003934 ORTHO05D005108 3.3e-24 115.2 107 52.3
Sed0008190 Sechium edule HOM05D003934 ORTHO05D005108 3.3e-24 115.2 100 53.0
PSO063G5737 Papaver somniferum HOM05D003934 ORTHO05D005108 4.3e-24 114.8 103 54.4
PSO170G4033 Papaver somniferum HOM05D003934 ORTHO05D005108 4.3e-24 114.8 103 54.4
MSTRG.8665 Avicennia marina HOM05D003934 ORTHO05D005108 5.6e-24 114.4 100 55.0
CiPaw.05G251900 Carya illinoinensis HOM05D003934 ORTHO05D005108 5.6e-24 114.4 101 54.5
Actinidia08639 Actinidia chinensis HOM05D003934 ORTHO05D005108 7.3e-24 114.0 103 53.4
PGR042G0302 Punica granatum HOM05D003934 ORTHO05D005108 7.3e-24 114.0 100 53.0
CSS0014973 Camellia sinensis var. sinensis HOM05D003934 ORTHO05D005108 9.5e-24 113.6 103 53.4
TWI14G0523 Tripterygium wilfordii HOM05D003934 ORTHO05D005108 9.5e-24 113.6 100 52.0
Glyma.04G236800 Glycine max HOM05D003934 ORTHO05D005108 1.2e-23 113.2 100 56.0
Lalb_Chr08g0240341 Lupinus albus HOM05D003934 ORTHO05D005108 1.2e-23 113.2 109 51.4
Oeu041045.2 Olea europaea HOM05D003934 ORTHO05D005108 1.6e-23 112.8 99 53.5
Migut.F00226 Erythranthe guttata HOM05D003934 ORTHO05D005108 2.8e-23 112.1 100 53.0
MD07G1290300 Malus domestica HOM05D003934 ORTHO05D005108 2.8e-23 112.1 100 55.0
Solyc03g083430.3 Solanum lycopersicum HOM05D003934 ORTHO05D005108 3.6e-23 111.7 107 51.4
Sopen03g023200 Solanum pennellii HOM05D003934 ORTHO05D005108 3.6e-23 111.7 107 51.4
PGSC0003DMG400009079 Solanum tuberosum HOM05D003934 ORTHO05D005108 3.6e-23 111.7 107 51.4
FAN01G0480 Fragaria x ananassa HOM05D003934 ORTHO05D005108 4.7e-23 111.3 93 54.8
FAN06G1603 Fragaria x ananassa HOM05D003934 ORTHO05D005108 4.7e-23 111.3 93 54.8
RcHm_v2.0_Chr1g0331941 Rosa chinensis HOM05D003934 ORTHO05D005108 6.2e-23 110.9 94 54.3
MD01G1219700 Malus domestica HOM05D003934 ORTHO05D005108 1.1e-22 110.2 100 53.0
QL09p009520 Quercus lobata HOM05D003934 ORTHO05D005108 1.1e-22 110.2 101 51.5
FAN03G1965 Fragaria x ananassa HOM05D003934 ORTHO05D005108 1.4e-22 109.8 93 53.8
Aa31LG11G7140 Aethionema arabicum HOM05D003934 ORTHO05D005108 2.4e-22 109.0 100 52.0
Medtr3g091250 Medicago truncatula HOM05D003934 ORTHO05D005108 2.4e-22 109.0 109 51.4
Sabra15G0013200 Salix brachista HOM05D003934 ORTHO05D005108 2.4e-22 109.0 100 54.0
Eucgr.A01467 Eucalyptus grandis HOM05D003934 ORTHO05D005108 3.1e-22 108.6 100 51.0
Glyma.06G127500 Glycine max HOM05D003934 ORTHO05D005108 3.1e-22 108.6 100 54.0
Nitab4.5_0000714g0110 Nicotiana tabacum HOM05D003934 ORTHO05D005108 3.1e-22 108.6 107 51.4
THA.LOC104816810 Tarenaya hassleriana HOM05D003934 ORTHO05D005108 3.1e-22 108.6 101 48.5
Cc02_g01680 Coffea canephora HOM05D003934 ORTHO05D005108 4.0e-22 108.2 100 49.0
BraA02t04872Z Brassica rapa HOM05D003934 ORTHO05D005108 5.2e-22 107.8 99 50.5
Carub.0006s0504 Capsella rubella HOM05D003934 ORTHO05D005108 5.2e-22 107.8 99 49.5
BcaB05g21680 Brassica carinata HOM05D003934 ORTHO05D005108 6.8e-22 107.5 99 50.5
CAN.G108.66 Capsicum annuum HOM05D003934 ORTHO05D005108 6.8e-22 107.5 105 49.5
FvH4_7g05370 Fragaria vesca HOM05D003934 ORTHO05D005108 8.9e-22 107.1 93 53.8
FAN01G0659 Fragaria x ananassa HOM05D003934 ORTHO05D005108 8.9e-22 107.1 93 53.8
FAN10G1096 Fragaria x ananassa HOM05D003934 ORTHO05D005108 8.9e-22 107.1 93 53.8
FAN10G2167 Fragaria x ananassa HOM05D003934 ORTHO05D005108 8.9e-22 107.1 93 53.8
Potri.015G017200 Populus trichocarpa HOM05D003934 ORTHO05D005108 1.2e-21 106.7 100 52.0
Prupe.2G311500 Prunus persica HOM05D003934 ORTHO05D005108 1.2e-21 106.7 102 52.9
Sabra12G0018300 Salix brachista HOM05D003934 ORTHO05D005108 1.2e-21 106.7 103 51.5
THA.LOC104820263 Tarenaya hassleriana HOM05D003934 ORTHO05D005108 1.5e-21 106.3 101 46.5
BolC2t06227H Brassica oleracea HOM05D003934 ORTHO05D005108 2.0e-21 105.9 99 49.5
Os03g0717600 Oryza sativa ssp. japonica HOM05D003934 ORTHO05D005108 2.0e-21 105.9 95 50.5
Sp6g36730 Schrenkiella parvula HOM05D003934 ORTHO05D005108 2.0e-21 105.9 99 48.5
C02p02610 Brassica napus HOM05D003934 ORTHO05D005108 2.6e-21 105.5 99 49.5
AL6G16130 Arabidopsis lyrata HOM05D003934 ORTHO05D005108 1.3e-20 103.2 94 50.0
Thhalv10013305m.g Eutrema salsugineum HOM05D003934 ORTHO05D005108 1.3e-20 103.2 106 47.2
FAN26G2519 Fragaria x ananassa HOM05D003934 ORTHO05D005108 1.3e-20 103.2 93 51.6
Atru.chr1.153 Acer truncatum HOM05D003934 ORTHO05D005108 1.7e-20 102.8 95 51.6
Potri.012G012800 Populus trichocarpa HOM05D003934 ORTHO05D005108 1.7e-20 102.8 103 50.5
ECA232G2652 Erigeron canadensis HOM05D003934 ORTHO05D005108 2.2e-20 102.4 108 45.4
FvH4_1g22860 Fragaria vesca HOM05D003934 ORTHO05D005108 2.2e-20 102.4 90 53.3
FAN28G1126 Fragaria x ananassa HOM05D003934 ORTHO05D005108 2.9e-20 102.1 93 51.6
CARHR206870 Cardamine hirsuta HOM05D003934 ORTHO05D005108 4.9e-20 101.3 99 46.5
BcaB01g05979 Brassica carinata HOM05D003934 ORTHO05D005108 6.4e-20 100.9 96 49.0
Zm00001eb156600 Zea mays HOM05D003934 ORTHO05D005108 6.4e-20 100.9 96 51.0
FAN23G2330 Fragaria x ananassa HOM05D003934 ORTHO05D005108 8.4e-20 100.5 93 50.5
A03p02600 Brassica napus HOM05D003934 ORTHO05D005108 1.1e-19 100.1 96 49.0
BraA03t09621Z Brassica rapa HOM05D003934 ORTHO05D005108 1.1e-19 100.1 96 49.0
C03p02940 Brassica napus HOM05D003934 ORTHO05D005108 1.2e-18 96.7 96 46.9
BolC3t12849H Brassica oleracea HOM05D003934 ORTHO05D005108 1.2e-18 96.7 96 46.9
AT5G06160 Arabidopsis thaliana HOM05D003934 ORTHO05D005108 4.6e-18 94.7 95 46.3
Prupe.2G260300 Prunus persica HOM05D003934 ORTHO05D005108 6.0e-18 94.4 89 57.3
Cpa.g.sc3.69 Carica papaya HOM05D003934 ORTHO05D005108 1.5e-16 89.7 75 57.3
SMO119G0296 Selaginella moellendorffii HOM05D003934 ORTHO05D005108 1.2e-15 86.7 86 47.7
FAN24G3520 Fragaria x ananassa HOM05D003934 ORTHO05D005108 2.8e-15 85.5 93 46.2
FAN18G2200 Fragaria x ananassa HOM05D003934 ORTHO05D005108 8.1e-15 84.0 89 46.1
FvH4_2g12040 Fragaria vesca HOM05D003934 ORTHO05D005108 4.0e-14 81.6 77 51.9
FvH4_7g06390 Fragaria vesca HOM05D003934 ORTHO05D005108 4.0e-14 81.6 83 43.4
HanXRQChr09g0252971 Helianthus annuus HOM05D003934 ORTHO05D005108 4.0e-14 81.6 112 41.1
AUR62019431 Chenopodium quinoa HOM05D003934 ORTHO05D005108 9.0e-14 80.5 84 45.2
FAN19G2010 Fragaria x ananassa HOM05D003934 ORTHO05D005108 2.0e-13 79.3 90 46.7
FAN27G0411 Fragaria x ananassa HOM05D003934 ORTHO05D005108 1.7e-12 76.3 93 40.9
AUR62034796 Chenopodium quinoa HOM05D003934 ORTHO05D005108 1.9e-11 72.8 85 41.2
AUR62007347 Chenopodium quinoa HOM05D003934 ORTHO05D005108 1.3e-09 66.6 83 41.0
Ca_16696_v3 Cicer arietinum L. HOM05D003934 ORTHO05D005108 3.0e-09 65.5 100 39.0
MCO08G102 Micromonas commoda HOM05D003934 ORTHO05D005108 2.5e-08 62.4 98 35.7
CBR_g4095 Chara braunii HOM05D003934 ORTHO05D005108 7.3e-08 60.8 58 46.6
Sp5g08830 Schrenkiella parvula HOM05D003934 ORTHO05D005108 9.6e-08 60.5 81 38.3
AUR62031013 Chenopodium quinoa HOM05D003934 ORTHO05D005108 1.3e-07 60.1 85 38.8
Gorai.005G191100 Gossypium raimondii HOM05D003934 ORTHO05D005108 2.1e-07 59.3 60 50.0
Cfa023976 Carpinus fangiana HOM05D003934 ORTHO05D005108 3.1e-06 55.5 99 33.3
AUR62031015 Chenopodium quinoa HOM05D003934 ORTHO05D005108 9.0e-06 53.9 66 39.4


User provided reference genes

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