Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_04445 Sequoiadendron giganteum HOM05D003939 ORTHO05D005979 6.0e-155 550.8 280 100.0
SEGI_00927 Sequoiadendron giganteum HOM05D003939 ORTHO05D005979 4.3e-113 411.8 282 73.4
Mapoly0011s0050 Marchantia polymorpha HOM05D003939 ORTHO05D005979 1.5e-110 403.3 282 74.5
Pp3c15_14600 Physcomitrium patens HOM05D003939 ORTHO05D005979 3.2e-108 395.6 282 71.6
ATR0064G076 Amborella trichopoda HOM05D003939 ORTHO05D005979 4.3e-105 385.2 283 67.5
MBI19_g03793_MAGBIO Magnolia biondii HOM05D003939 ORTHO05D005979 2.1e-104 382.9 283 67.5
PSO013G0104 Papaver somniferum HOM05D003939 ORTHO05D005979 8.2e-104 380.9 282 67.0
Nn3g17411 Nelumbo nucifera HOM05D003939 ORTHO05D005979 1.4e-103 380.2 283 67.1
MD09G1064300 Malus domestica HOM05D003939 ORTHO05D005979 1.5e-102 376.7 283 67.1
GSVIVG01011514001 Vitis vinifera HOM05D003939 ORTHO05D005979 2.6e-102 375.9 283 66.8
TAR371G0557 Trochodendron aralioides HOM05D003939 ORTHO05D005979 3.4e-102 375.6 282 67.7
SMO116G0168 Selaginella moellendorffii HOM05D003939 ORTHO05D005979 4.5e-102 375.2 275 72.0
QL02p067905 Quercus lobata HOM05D003939 ORTHO05D005979 7.6e-102 374.4 282 66.0
Haze_14442 Corylus avellana HOM05D003939 ORTHO05D005979 1.7e-101 373.2 282 66.0
MD17G1057600 Malus domestica HOM05D003939 ORTHO05D005979 1.7e-101 373.2 283 66.8
ClCG07G007360 Citrullus lanatus HOM05D003939 ORTHO05D005979 1.1e-100 370.5 283 65.7
Cfa007652 Carpinus fangiana HOM05D003939 ORTHO05D005979 1.4e-100 370.2 282 65.2
arahy.Tifrunner.gnm1.ann1.U2J8P8 Arachis hypogaea HOM05D003939 ORTHO05D005979 2.5e-100 369.4 283 66.8
Potri.017G092600 Populus trichocarpa HOM05D003939 ORTHO05D005979 2.5e-100 369.4 283 65.7
Thecc.04G092900 Theobroma cacao HOM05D003939 ORTHO05D005979 2.5e-100 369.4 282 65.2
arahy.Tifrunner.gnm1.ann1.HNPA74 Arachis hypogaea HOM05D003939 ORTHO05D005979 5.5e-100 368.2 283 66.4
Sabra17G0081700 Salix brachista HOM05D003939 ORTHO05D005979 5.5e-100 368.2 283 65.4
AagrBONN_evm.TU.Sc2ySwM_344.3096 Anthoceros agrestis HOM05D003939 ORTHO05D005979 7.1e-100 367.9 282 68.8
CsaV3_4G008740 Cucumis sativus L. HOM05D003939 ORTHO05D005979 9.3e-100 367.5 283 65.0
Actinidia01988 Actinidia chinensis HOM05D003939 ORTHO05D005979 1.2e-99 367.1 283 66.1
TWI60G0125 Tripterygium wilfordii HOM05D003939 ORTHO05D005979 1.2e-99 367.1 282 64.5
Prupe.3G256700 Prunus persica HOM05D003939 ORTHO05D005979 1.6e-99 366.7 283 65.4
Manes.01G097400 Manihot esculenta HOM05D003939 ORTHO05D005979 2.1e-99 366.3 283 65.4
CSS0011135 Camellia sinensis var. sinensis HOM05D003939 ORTHO05D005979 4.6e-99 365.2 283 65.7
Gohir.A09G010200 Gossypium hirsutum HOM05D003939 ORTHO05D005979 4.6e-99 365.2 282 64.5
Gorai.006G011000 Gossypium raimondii HOM05D003939 ORTHO05D005979 4.6e-99 365.2 282 64.5
COL.COLO4_21400 Corchorus olitorius HOM05D003939 ORTHO05D005979 6.1e-99 364.8 282 63.5
Dinv33821 Davidia involucrata HOM05D003939 ORTHO05D005979 1.0e-98 364.0 282 64.9
Duzib264G0523 Durio zibethinus HOM05D003939 ORTHO05D005979 1.0e-98 364.0 282 64.2
Lalb_Chr06g0175001 Lupinus albus HOM05D003939 ORTHO05D005979 1.3e-98 363.6 283 65.0
Aqoxy3G03594 Aquilegia oxysepala HOM05D003939 ORTHO05D005979 1.8e-98 363.2 283 64.7
Atru.chr8.419 Acer truncatum HOM05D003939 ORTHO05D005979 8.7e-98 360.9 282 63.5
PSO063G3321 Papaver somniferum HOM05D003939 ORTHO05D005979 1.1e-97 360.5 283 64.3
Nitab4.5_0001637g0010 Nicotiana tabacum HOM05D003939 ORTHO05D005979 1.5e-97 360.1 282 64.5
MELO3C016065.2 Cucumis melo HOM05D003939 ORTHO05D005979 3.3e-97 359.0 288 63.5
Nitab4.5_0002960g0010 Nicotiana tabacum HOM05D003939 ORTHO05D005979 3.3e-97 359.0 282 64.5
VMungo0464G1977 Vigna mungo HOM05D003939 ORTHO05D005979 4.3e-97 358.6 283 65.0
Medtr6g015060 Medicago truncatula HOM05D003939 ORTHO05D005979 5.7e-97 358.2 283 64.3
Migut.H00638 Erythranthe guttata HOM05D003939 ORTHO05D005979 7.4e-97 357.8 283 64.0
vmacro05651 Vaccinium macrocarpon HOM05D003939 ORTHO05D005979 7.4e-97 357.8 283 65.0
Phvul.004G035100 Phaseolus vulgaris HOM05D003939 ORTHO05D005979 2.8e-96 355.9 283 64.3
PGR083G1596 Punica granatum HOM05D003939 ORTHO05D005979 2.8e-96 355.9 282 62.4
Eucgr.J01370 Eucalyptus grandis HOM05D003939 ORTHO05D005979 3.7e-96 355.5 283 63.6
Peaxi162Scf00451g00326 Petunia axillaris HOM05D003939 ORTHO05D005979 3.7e-96 355.5 284 64.1
Sopen03g014250 Solanum pennellii HOM05D003939 ORTHO05D005979 3.7e-96 355.5 282 63.8
Ca_04301_v3 Cicer arietinum L. HOM05D003939 ORTHO05D005979 4.8e-96 355.1 283 64.3
Solyc03g059420.4 Solanum lycopersicum HOM05D003939 ORTHO05D005979 6.3e-96 354.8 282 63.8
Ciclev10010894m.g Citrus clementina HOM05D003939 ORTHO05D005979 8.2e-96 354.4 282 62.4
Glyma.13G057300 Glycine max HOM05D003939 ORTHO05D005979 1.8e-95 353.2 283 63.6
Sed0008583 Sechium edule HOM05D003939 ORTHO05D005979 3.1e-95 352.4 282 62.8
Hund13156 Selenicereus undatus HOM05D003939 ORTHO05D005979 3.1e-95 352.4 281 63.3
Sc10g0004620 Simmondsia chinensis HOM05D003939 ORTHO05D005979 3.1e-95 352.4 282 62.4
AUR62018173 Chenopodium quinoa HOM05D003939 ORTHO05D005979 6.9e-95 351.3 282 63.8
Lsat_1_v5_gn_3_98161 Lactuca sativa HOM05D003939 ORTHO05D005979 9.0e-95 350.9 282 64.2
CAN.G381.1 Capsicum annuum HOM05D003939 ORTHO05D005979 2.0e-94 349.7 282 61.7
HPP92_012299 Vanilla planifolia HOM05D003939 ORTHO05D005979 2.0e-94 349.7 283 62.5
AUR62042423 Chenopodium quinoa HOM05D003939 ORTHO05D005979 2.6e-94 349.4 282 63.5
MSTRG.3009 Avicennia marina HOM05D003939 ORTHO05D005979 3.4e-94 349.0 282 62.8
Oeu007060.1 Olea europaea HOM05D003939 ORTHO05D005979 3.4e-94 349.0 283 61.8
AL6G26400 Arabidopsis lyrata HOM05D003939 ORTHO05D005979 4.5e-94 348.6 282 61.3
Ah.10g032070 Amaranthus hybridus HOM05D003939 ORTHO05D005979 5.9e-94 348.2 282 62.8
Cc07_g03930 Coffea canephora HOM05D003939 ORTHO05D005979 5.9e-94 348.2 283 62.5
SGA_v2.0_scaffold52G19175 Striga asiatica HOM05D003939 ORTHO05D005979 5.9e-94 348.2 283 62.2
AT5G15540 Arabidopsis thaliana HOM05D003939 ORTHO05D005979 7.7e-94 347.8 282 61.3
CANSAT64G0725 Cannabis sativa HOM05D003939 ORTHO05D005979 1.0e-93 347.4 283 61.8
EL10Ac2g03123 Beta vulgaris HOM05D003939 ORTHO05D005979 1.7e-93 346.7 282 63.1
CARHR197770 Cardamine hirsuta HOM05D003939 ORTHO05D005979 2.9e-93 345.9 282 61.0
DCAR_025422 Daucus carota HOM05D003939 ORTHO05D005979 2.9e-93 345.9 281 63.0
THA.LOC104821002 Tarenaya hassleriana HOM05D003939 ORTHO05D005979 2.9e-93 345.9 282 59.2
Sp6g28560 Schrenkiella parvula HOM05D003939 ORTHO05D005979 3.8e-93 345.5 282 61.0
C09p61660 Brassica napus HOM05D003939 ORTHO05D005979 8.5e-93 344.4 282 60.6
BolC9t59004H Brassica oleracea HOM05D003939 ORTHO05D005979 8.5e-93 344.4 282 60.6
Carub.0006s1371 Capsella rubella HOM05D003939 ORTHO05D005979 1.1e-92 344.0 282 60.3
Aa31LG11G14050 Aethionema arabicum HOM05D003939 ORTHO05D005979 1.4e-92 343.6 282 59.6
RcHm_v2.0_Chr2g0166131 Rosa chinensis HOM05D003939 ORTHO05D005979 1.4e-92 343.6 282 62.4
TPR.G10018 Trifolium pratense HOM05D003939 ORTHO05D005979 1.9e-92 343.2 284 63.0
Lj2g0019419 Lotus japonicus HOM05D003939 ORTHO05D005979 3.2e-92 342.4 290 61.4
BolC2t06707H Brassica oleracea HOM05D003939 ORTHO05D005979 7.2e-92 341.3 282 60.3
FAN09G4101 Fragaria x ananassa HOM05D003939 ORTHO05D005979 1.2e-91 340.5 282 62.1
FAN02G0596 Fragaria x ananassa HOM05D003939 ORTHO05D005979 1.6e-91 340.1 282 61.7
Gohir.D09G009300 Gossypium hirsutum HOM05D003939 ORTHO05D005979 2.7e-91 339.3 282 61.7
A10p23410 Brassica napus HOM05D003939 ORTHO05D005979 3.6e-91 339.0 282 59.6
BraA10t44409Z Brassica rapa HOM05D003939 ORTHO05D005979 3.6e-91 339.0 282 59.6
FvH4_6g47080 Fragaria vesca HOM05D003939 ORTHO05D005979 6.1e-91 338.2 282 61.7
A02p03080 Brassica napus HOM05D003939 ORTHO05D005979 7.9e-91 337.8 282 60.3
BraA02t05278Z Brassica rapa HOM05D003939 ORTHO05D005979 7.9e-91 337.8 282 60.3
Thhalv10012417m.g Eutrema salsugineum HOM05D003939 ORTHO05D005979 1.0e-90 337.4 282 60.3
FAN05G1397 Fragaria x ananassa HOM05D003939 ORTHO05D005979 1.8e-90 336.7 282 61.7
HanXRQChr17g0546541 Helianthus annuus HOM05D003939 ORTHO05D005979 1.8e-90 336.7 283 61.8
C02p07770 Brassica napus HOM05D003939 ORTHO05D005979 3.0e-90 335.9 282 59.2
ECA246G3607 Erigeron canadensis HOM05D003939 ORTHO05D005979 2.5e-89 332.8 283 60.8
Psat1g067400 Pisum sativum HOM05D003939 ORTHO05D005979 4.3e-89 332.0 268 63.1
SHI25772 Sapria himalayana HOM05D003939 ORTHO05D005979 9.7e-89 330.9 296 59.1
Rhsim10G0043700 Rhododendron simsii HOM05D003939 ORTHO05D005979 8.2e-88 327.8 366 51.4
Lju41A4T71 Lonicera japonica HOM05D003939 ORTHO05D005979 3.1e-87 325.9 280 59.6
FAN14G2443 Fragaria x ananassa HOM05D003939 ORTHO05D005979 2.0e-86 323.2 282 60.3
Zm00001eb118180 Zea mays HOM05D003939 ORTHO05D005979 4.4e-81 305.4 283 56.2
Os07g0110400 Oryza sativa ssp. japonica HOM05D003939 ORTHO05D005979 8.2e-80 301.2 283 56.5
Zm00001eb298600 Zea mays HOM05D003939 ORTHO05D005979 1.4e-79 300.4 283 55.5
CBR_g19320 Chara braunii HOM05D003939 ORTHO05D005979 8.5e-77 291.2 285 56.5
Duzib187G1101 Durio zibethinus HOM05D003939 ORTHO05D005979 1.6e-70 270.4 259 54.1
HPP92_012254 Vanilla planifolia HOM05D003939 ORTHO05D005979 9.4e-68 261.2 222 60.4
DCAR_026524 Daucus carota HOM05D003939 ORTHO05D005979 1.1e-44 184.5 293 40.3
Glyma.19G029100 Glycine max HOM05D003939 ORTHO05D005979 2.5e-36 156.8 116 65.5
BolC9t58997H Brassica oleracea HOM05D003939 ORTHO05D005979 7.3e-36 155.2 119 61.3
Psat0s5863g0080 Pisum sativum HOM05D003939 ORTHO05D005979 1.9e-20 104.0 76 68.4
C09p61570 Brassica napus HOM05D003939 ORTHO05D005979 3.3e-20 103.2 71 66.2
Cpa.g.c43937 Carica papaya HOM05D003939 ORTHO05D005979 1.4e-18 97.8 70 68.6
Cre06.g278269 Chlamydomonas reinhardtii HOM05D003939 ORTHO05D005979 2.9e-16 90.1 296 27.0
Cpa.g.sc14.167 Carica papaya HOM05D003939 ORTHO05D005979 1.3e-08 64.7 50 60.0


User provided reference genes

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