Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim10G0203500 Rhododendron simsii HOM05D006371 ORTHO05D008309 0.0e+00 2040.4 1072 100.0
vmacro20507 Vaccinium macrocarpon HOM05D006371 ORTHO05D008309 5.2e-284 981.5 931 60.7
Actinidia02362 Actinidia chinensis HOM05D006371 ORTHO05D008309 1.0e-250 870.9 1072 49.5
CSS0032100 Camellia sinensis var. sinensis HOM05D006371 ORTHO05D008309 5.5e-209 732.3 1088 44.6
Dinv40160 Davidia involucrata HOM05D006371 ORTHO05D008309 6.8e-207 725.3 1063 45.3
Dinv08538 Davidia involucrata HOM05D006371 ORTHO05D008309 9.5e-185 651.7 1020 43.5
Lj4C228G6 Lonicera japonica HOM05D006371 ORTHO05D008309 7.3e-177 625.5 1055 41.2
TAR627G0565 Trochodendron aralioides HOM05D006371 ORTHO05D008309 1.2e-171 608.2 1027 41.3
Cfa014202 Carpinus fangiana HOM05D006371 ORTHO05D008309 6.0e-171 605.9 1094 38.8
QL04p067039 Quercus lobata HOM05D006371 ORTHO05D008309 9.5e-169 598.6 1106 38.4
Cc07_g11500 Coffea canephora HOM05D006371 ORTHO05D008309 8.9e-167 592.0 1096 38.8
Ciclev10014166m.g Citrus clementina HOM05D006371 ORTHO05D008309 2.6e-166 590.5 1091 40.0
Potri.014G170300 Populus trichocarpa HOM05D006371 ORTHO05D008309 6.4e-165 585.9 1093 39.3
TWI36G0955 Tripterygium wilfordii HOM05D006371 ORTHO05D008309 5.4e-164 582.8 1093 39.1
CiPaw.03G283700 Carya illinoinensis HOM05D006371 ORTHO05D008309 3.9e-162 576.6 1093 37.6
PGSC0003DMG400001545 Solanum tuberosum HOM05D006371 ORTHO05D008309 1.6e-160 571.2 1036 39.3
Thecc.01G199300 Theobroma cacao HOM05D006371 ORTHO05D008309 3.6e-160 570.1 1073 38.7
Hma1.2p1_0315F.1_g122770 Hydrangea macrophylla HOM05D006371 ORTHO05D008309 4.7e-160 569.7 857 43.5
Sabra14G0129800 Salix brachista HOM05D006371 ORTHO05D008309 6.2e-160 569.3 1093 38.9
Gohir.A11G148000 Gossypium hirsutum HOM05D006371 ORTHO05D008309 8.1e-160 568.9 1090 38.9
Solyc02g083140.3 Solanum lycopersicum HOM05D006371 ORTHO05D008309 4.0e-159 566.6 1085 38.1
Glyma.14G190200 Glycine max HOM05D006371 ORTHO05D008309 6.8e-159 565.8 1085 38.3
GSVIVG01030124001 Vitis vinifera HOM05D006371 ORTHO05D008309 6.8e-159 565.8 1113 38.4
Migut.D00896 Erythranthe guttata HOM05D006371 ORTHO05D008309 3.8e-157 560.1 989 41.6
Gorai.007G165100 Gossypium raimondii HOM05D006371 ORTHO05D008309 6.4e-157 559.3 1089 38.0
Manes.12G064500 Manihot esculenta HOM05D006371 ORTHO05D008309 3.2e-156 557.0 1095 36.9
Gohir.D11G154800 Gossypium hirsutum HOM05D006371 ORTHO05D008309 4.2e-156 556.6 1107 37.5
Prupe.3G194900 Prunus persica HOM05D006371 ORTHO05D008309 9.3e-156 555.4 1123 37.7
MD09G1130200 Malus domestica HOM05D006371 ORTHO05D008309 2.7e-155 553.9 1098 38.0
Duzib211G0069 Durio zibethinus HOM05D006371 ORTHO05D008309 6.0e-155 552.7 1094 37.6
RcHm_v2.0_Chr2g0155641 Rosa chinensis HOM05D006371 ORTHO05D008309 7.8e-155 552.4 1139 36.7
Sopen02g027900 Solanum pennellii HOM05D006371 ORTHO05D008309 1.3e-154 551.6 1034 38.7
EL10Ac6g13348 Beta vulgaris HOM05D006371 ORTHO05D008309 3.0e-154 550.4 1040 38.2
Duzib133G1082 Durio zibethinus HOM05D006371 ORTHO05D008309 6.6e-154 549.3 1088 37.4
Glyma.02G223400 Glycine max HOM05D006371 ORTHO05D008309 8.7e-154 548.9 1085 38.4
Lalb_Chr04g0252451 Lupinus albus HOM05D006371 ORTHO05D008309 4.3e-153 546.6 1080 37.7
CANSAT64G2089 Cannabis sativa HOM05D006371 ORTHO05D008309 5.6e-153 546.2 1106 37.3
COL.COLO4_19652 Corchorus olitorius HOM05D006371 ORTHO05D008309 5.6e-153 546.2 1086 36.9
SalBow7G3887 Salvia bowleyana HOM05D006371 ORTHO05D008309 5.6e-153 546.2 991 39.7
FAN09G0519 Fragaria x ananassa HOM05D006371 ORTHO05D008309 9.6e-153 545.4 1103 37.7
FAN14G0004 Fragaria x ananassa HOM05D006371 ORTHO05D008309 9.6e-153 545.4 1137 36.8
FvH4_6g40410 Fragaria vesca HOM05D006371 ORTHO05D008309 1.3e-152 545.0 1137 36.8
FAN05G5438 Fragaria x ananassa HOM05D006371 ORTHO05D008309 2.1e-152 544.3 1101 37.7
FAN02G4613 Fragaria x ananassa HOM05D006371 ORTHO05D008309 3.1e-151 540.4 1066 37.9
MELO3C024185.2 Cucumis melo HOM05D006371 ORTHO05D008309 5.3e-151 539.7 1148 35.9
Nn1g07560 Nelumbo nucifera HOM05D006371 ORTHO05D008309 5.3e-151 539.7 1102 36.8
Ca_05557_v3 Cicer arietinum L. HOM05D006371 ORTHO05D008309 1.5e-150 538.1 1123 36.2
PSO541G0072 Papaver somniferum HOM05D006371 ORTHO05D008309 1.5e-150 538.1 1085 37.4
arahy.Tifrunner.gnm1.ann1.YIC3VW Arachis hypogaea HOM05D006371 ORTHO05D008309 1.3e-149 535.0 1084 36.8
arahy.Tifrunner.gnm1.ann1.BM1T67 Arachis hypogaea HOM05D006371 ORTHO05D008309 2.9e-149 533.9 1084 36.9
PSO675G4792 Papaver somniferum HOM05D006371 ORTHO05D008309 2.4e-148 530.8 1108 37.1
CsaV3_2G010080 Cucumis sativus L. HOM05D006371 ORTHO05D008309 7.1e-148 529.3 1100 36.0
Eucgr.A01367 Eucalyptus grandis HOM05D006371 ORTHO05D008309 1.6e-147 528.1 1099 36.6
LjContig00155g0006571 Lotus japonicus HOM05D006371 ORTHO05D008309 3.5e-147 526.9 1089 36.7
PGR031G1410 Punica granatum HOM05D006371 ORTHO05D008309 3.9e-146 523.5 1098 37.3
Nitab4.5_0005413g0050 Nicotiana tabacum HOM05D006371 ORTHO05D008309 8.7e-146 522.3 1020 38.2
Aqoxy3G02224 Aquilegia oxysepala HOM05D006371 ORTHO05D008309 1.5e-145 521.5 1077 36.4
Peaxi162Scf00300g00515 Petunia axillaris HOM05D006371 ORTHO05D008309 1.5e-145 521.5 1105 36.7
ECA232G0409 Erigeron canadensis HOM05D006371 ORTHO05D008309 5.6e-145 519.6 1050 36.5
HanXRQChr09g0256951 Helianthus annuus HOM05D006371 ORTHO05D008309 7.3e-145 519.2 1001 38.6
Psat2g060760 Pisum sativum HOM05D006371 ORTHO05D008309 9.6e-145 518.8 1080 36.1
Thhalv10002385m.g Eutrema salsugineum HOM05D006371 ORTHO05D008309 1.1e-143 515.4 1080 35.9
Ah.02g129050 Amaranthus hybridus HOM05D006371 ORTHO05D008309 2.4e-143 514.2 946 39.5
TPR.G13852 Trifolium pratense HOM05D006371 ORTHO05D008309 2.6e-142 510.8 1093 35.3
Lsat_1_v5_gn_4_142580 Lactuca sativa HOM05D006371 ORTHO05D008309 7.6e-142 509.2 1052 37.1
Sc07g0001260 Simmondsia chinensis HOM05D006371 ORTHO05D008309 9.9e-142 508.8 1015 37.9
MSTRG.10896 Avicennia marina HOM05D006371 ORTHO05D008309 2.4e-140 504.2 843 41.9
Sp3g23150 Schrenkiella parvula HOM05D006371 ORTHO05D008309 2.4e-140 504.2 1084 35.3
Hund03659 Selenicereus undatus HOM05D006371 ORTHO05D008309 5.5e-140 503.1 1021 37.1
AL3G41970 Arabidopsis lyrata HOM05D006371 ORTHO05D008309 9.3e-140 502.3 1118 34.6
BcaB06g26772 Brassica carinata HOM05D006371 ORTHO05D008309 1.2e-139 501.9 1084 35.6
THA.LOC104808834 Tarenaya hassleriana HOM05D006371 ORTHO05D008309 2.1e-139 501.1 1130 35.5
AUR62039632 Chenopodium quinoa HOM05D006371 ORTHO05D008309 1.0e-138 498.8 972 37.8
CARHR102110 Cardamine hirsuta HOM05D006371 ORTHO05D008309 3.0e-138 497.3 1073 35.7
CAN.G890.8 Capsicum annuum HOM05D006371 ORTHO05D008309 3.9e-138 496.9 799 42.2
BraA07t28469Z Brassica rapa HOM05D006371 ORTHO05D008309 1.6e-136 491.5 1083 34.9
C07p10340 Brassica napus HOM05D006371 ORTHO05D008309 2.1e-136 491.1 1037 35.6
A07p06760 Brassica napus HOM05D006371 ORTHO05D008309 3.7e-136 490.3 1074 34.9
BolC7t41483H Brassica oleracea HOM05D006371 ORTHO05D008309 4.8e-136 490.0 1084 35.0
Aa31sc575G10 Aethionema arabicum HOM05D006371 ORTHO05D008309 1.8e-135 488.0 1083 35.9
BcaC06g35860 Brassica carinata HOM05D006371 ORTHO05D008309 1.8e-135 488.0 1084 34.9
ECA238G3451 Erigeron canadensis HOM05D006371 ORTHO05D008309 3.1e-135 487.3 1002 36.4
Sed0018275 Sechium edule HOM05D006371 ORTHO05D008309 3.1e-135 487.3 920 38.9
Carub.0003s2599 Capsella rubella HOM05D006371 ORTHO05D008309 4.0e-135 486.9 1081 34.8
ATR0751G221 Amborella trichopoda HOM05D006371 ORTHO05D008309 5.8e-134 483.0 1060 35.2
Medtr5g069430 Medicago truncatula HOM05D006371 ORTHO05D008309 5.8e-134 483.0 1112 34.4
AUR62040011 Chenopodium quinoa HOM05D006371 ORTHO05D008309 1.3e-133 481.9 1012 35.9
MBI15_g38530_MAGBIO Magnolia biondii HOM05D006371 ORTHO05D008309 7.1e-132 476.1 947 37.6
AT2G04270 Arabidopsis thaliana HOM05D006371 ORTHO05D008309 6.7e-130 469.5 799 41.1
Nitab4.5_0023804g0010 Nicotiana tabacum HOM05D006371 ORTHO05D008309 7.4e-129 466.1 849 39.5
Atru.chr6.3429 Acer truncatum HOM05D006371 ORTHO05D008309 1.1e-127 462.2 773 41.4
Oeu049652.2 Olea europaea HOM05D006371 ORTHO05D008309 2.4e-127 461.1 1097 34.7
Phvul.008G190000 Phaseolus vulgaris HOM05D006371 ORTHO05D008309 2.4e-127 461.1 918 37.6
ClCG02G003000 Citrullus lanatus HOM05D006371 ORTHO05D008309 1.2e-126 458.8 990 36.8
DCAR_023137 Daucus carota HOM05D006371 ORTHO05D008309 3.5e-123 447.2 844 38.6
Haze_12588 Corylus avellana HOM05D006371 ORTHO05D008309 3.0e-122 444.1 723 40.7
Os08g0323600 Oryza sativa ssp. japonica HOM05D006371 ORTHO05D008309 1.1e-119 435.6 1095 33.8
Hund03661 Selenicereus undatus HOM05D006371 ORTHO05D008309 1.1e-119 435.6 1042 35.2
SGA_v2.0_scaffold68G22808 Striga asiatica HOM05D006371 ORTHO05D008309 2.6e-118 431.0 1015 35.7
HPP92_003032 Vanilla planifolia HOM05D006371 ORTHO05D008309 1.4e-116 425.2 861 37.6
Zm00001eb038720 Zea mays HOM05D006371 ORTHO05D008309 5.1e-114 416.8 711 40.2
CDE02G2282 Ceratophyllum demersum HOM05D006371 ORTHO05D008309 3.3e-105 387.5 923 34.1
Cpa.g.sc136.51 Carica papaya HOM05D006371 ORTHO05D008309 4.8e-104 383.6 682 41.1
unitig_748.g7080 Utricularia gibba HOM05D006371 ORTHO05D005825 1.5e-100 372.1 799 36.3
Mapoly0111s0056 Marchantia polymorpha HOM05D006371 ORTHO05D008309 2.2e-96 358.2 633 36.7
Pp3c4_14910 Physcomitrium patens HOM05D006371 ORTHO05D008309 1.7e-85 322.0 712 32.7
SMO117G0275 Selaginella moellendorffii HOM05D006371 ORTHO05D008309 1.3e-77 295.8 617 35.0
AagrBONN_evm.TU.Sc2ySwM_368.983 Anthoceros agrestis HOM05D006371 ORTHO05D008309 1.4e-71 275.8 695 31.4
AUR62026198 Chenopodium quinoa HOM05D006371 ORTHO05D008309 3.8e-40 171.4 308 39.0
SEGI_21719 Sequoiadendron giganteum HOM05D006371 ORTHO05D008309 3.0e-37 161.8 340 34.7
Ca_28887_v3 Cicer arietinum L. HOM05D006371 ORTHO05D008309 7.4e-28 130.6 485 24.5
Haze_12589 Corylus avellana HOM05D006371 ORTHO05D008309 2.6e-25 122.1 243 39.9
CSS0035540 Camellia sinensis var. sinensis HOM05D006371 ORTHO05D008309 8.4e-24 117.1 105 55.2
SEGI_30134 Sequoiadendron giganteum HOM05D006371 ORTHO05D008309 2.5e-20 105.5 277 32.9
MCO12G287 Micromonas commoda HOM05D006371 ORTHO05D008309 1.6e-19 102.8 450 25.1
MD17G1105600 Malus domestica HOM05D006371 ORTHO05D008309 4.9e-16 91.3 76 64.5
CBR_g28922 Chara braunii HOM05D000019 ORTHO05D000048 1.5e-12 79.7 253 27.3
CBR_g28919 Chara braunii HOM05D006371 ORTHO05D000048 1.3e-11 76.6 101 44.6


User provided reference genes

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