Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim01G0114900 Rhododendron simsii HOM05D004601 ORTHO05D005806 3.7e-185 651.4 320 100.0
RhsimUnG0137600 Rhododendron simsii HOM05D004601 ORTHO05D005806 2.3e-49 200.3 405 38.8
Hma1.2p1_0235F.1_g098690 Hydrangea macrophylla HOM05D004601 ORTHO05D005806 1.2e-39 167.9 96 85.4
Ciclev10007283m.g Citrus clementina HOM05D004601 ORTHO05D005806 5.2e-38 162.5 104 78.8
TAR383G0412 Trochodendron aralioides HOM05D004601 ORTHO05D005806 6.8e-38 162.2 104 77.9
CiPaw.08G032200 Carya illinoinensis HOM05D004601 ORTHO05D005806 8.9e-38 161.8 104 78.8
Dinv25455 Davidia involucrata HOM05D004601 ORTHO05D005806 1.2e-37 161.4 104 78.8
Rhsim03G0267200 Rhododendron simsii HOM05D004601 ORTHO05D005806 1.2e-37 161.4 104 76.9
Phvul.009G235800 Phaseolus vulgaris HOM05D004601 ORTHO05D005806 1.5e-37 161.0 98 80.6
Aqoxy7G02847 Aquilegia oxysepala HOM05D004601 ORTHO05D005806 2.0e-37 160.6 104 76.0
ECA236G0938 Erigeron canadensis HOM05D004601 ORTHO05D005806 2.0e-37 160.6 104 77.9
Lj7A622G14 Lonicera japonica HOM05D004601 ORTHO05D005806 2.0e-37 160.6 102 77.5
Sabra18G0116000 Salix brachista HOM05D004601 ORTHO05D005806 2.0e-37 160.6 144 61.1
Actinidia02499 Actinidia chinensis HOM05D004601 ORTHO05D005806 2.6e-37 160.2 104 78.8
Cfa013456 Carpinus fangiana HOM05D004601 ORTHO05D005806 2.6e-37 160.2 101 79.2
ClCG11G011720 Citrullus lanatus HOM05D004601 ORTHO05D005806 2.6e-37 160.2 98 78.6
Glyma.15G166700 Glycine max HOM05D004601 ORTHO05D005806 2.6e-37 160.2 104 77.9
Hma1.2p1_0235F.1_g098680 Hydrangea macrophylla HOM05D004601 ORTHO05D005806 2.6e-37 160.2 104 77.9
CANSAT11G0507 Cannabis sativa HOM05D004601 ORTHO05D005806 3.4e-37 159.8 104 77.9
vmacro05994 Vaccinium macrocarpon HOM05D004601 ORTHO05D005806 3.4e-37 159.8 100 80.0
CSS0021444 Camellia sinensis var. sinensis HOM05D004601 ORTHO05D005806 4.4e-37 159.5 104 77.9
Psat1g144400 Pisum sativum HOM05D004601 ORTHO05D005806 5.8e-37 159.1 104 77.9
arahy.Tifrunner.gnm1.ann1.8TE3EA Arachis hypogaea HOM05D004601 ORTHO05D005806 9.8e-37 158.3 104 76.0
Cc06_g20790 Coffea canephora HOM05D004601 ORTHO05D005806 9.8e-37 158.3 104 78.8
DCAR_020147 Daucus carota HOM05D004601 ORTHO05D005806 9.8e-37 158.3 113 72.6
GSVIVG01029314001 Vitis vinifera HOM05D004601 ORTHO05D005806 9.8e-37 158.3 101 80.2
Aqoxy295s003 Aquilegia oxysepala HOM05D004601 ORTHO05D005806 1.3e-36 157.9 111 70.3
VMungo1309G1314 Vigna mungo HOM05D004601 ORTHO05D005806 1.3e-36 157.9 104 76.9
HanXRQChr05g0141031 Helianthus annuus HOM05D004601 ORTHO05D005806 1.7e-36 157.5 104 76.9
Oeu019558.1 Olea europaea HOM05D004601 ORTHO05D005806 1.7e-36 157.5 104 76.0
Potri.018G141900 Populus trichocarpa HOM05D004601 ORTHO05D005806 1.7e-36 157.5 144 60.4
PGR142G2375 Punica granatum HOM05D004601 ORTHO05D005806 2.9e-36 156.8 104 76.0
PGR142G4125 Punica granatum HOM05D004601 ORTHO05D005806 2.9e-36 156.8 104 76.0
Ca_02111_v3 Cicer arietinum L. HOM05D004601 ORTHO05D005806 3.7e-36 156.4 104 75.0
Lj6g0004756 Lotus japonicus HOM05D004601 ORTHO05D005806 3.7e-36 156.4 104 75.0
BcaC04g19995 Brassica carinata HOM05D004601 ORTHO05D005806 4.9e-36 156.0 101 78.2
A10p14520 Brassica napus HOM05D004601 ORTHO05D005806 4.9e-36 156.0 101 78.2
C09p48970 Brassica napus HOM05D004601 ORTHO05D005806 4.9e-36 156.0 101 78.2
BolC9t57749H Brassica oleracea HOM05D004601 ORTHO05D005806 4.9e-36 156.0 101 78.2
BraA10t43541Z Brassica rapa HOM05D004601 ORTHO05D005806 4.9e-36 156.0 101 78.2
Sp6g18890 Schrenkiella parvula HOM05D004601 ORTHO05D005806 4.9e-36 156.0 105 74.3
TPR.G7576 Trifolium pratense HOM05D004601 ORTHO05D000001 4.9e-36 156.0 104 75.0
Lalb_Chr08g0231931 Lupinus albus HOM05D004601 ORTHO05D005806 6.4e-36 155.6 144 59.0
Prupe.1G074600 Prunus persica HOM05D004601 ORTHO05D005806 6.4e-36 155.6 103 75.7
Cpa.g.sc95.10 Carica papaya HOM05D004601 ORTHO05D005806 8.3e-36 155.2 104 74.0
Manes.14G159112 Manihot esculenta HOM05D004601 ORTHO05D005806 8.3e-36 155.2 101 77.2
RcHm_v2.0_Chr4g0399311 Rosa chinensis HOM05D004601 ORTHO05D005806 8.3e-36 155.2 103 76.7
Sc16g0011160 Simmondsia chinensis HOM05D004601 ORTHO05D005806 8.3e-36 155.2 103 75.7
Medtr2g038030 Medicago truncatula HOM05D004601 ORTHO05D005806 1.9e-35 154.1 104 75.0
MELO3C003972.2 Cucumis melo HOM05D004601 ORTHO05D005806 2.4e-35 153.7 104 74.0
CsaV3_2G008760 Cucumis sativus L. HOM05D004601 ORTHO05D005806 2.4e-35 153.7 104 74.0
Eucgr.C00108 Eucalyptus grandis HOM05D004601 ORTHO05D005806 2.4e-35 153.7 104 75.0
Thecc.09G186600 Theobroma cacao HOM05D004601 ORTHO05D005806 2.4e-35 153.7 104 74.0
MSTRG.5939 Avicennia marina HOM05D004601 ORTHO05D005806 3.2e-35 153.3 99 78.8
Thhalv10012474m.g Eutrema salsugineum HOM05D004601 ORTHO05D005806 3.2e-35 153.3 101 75.2
FAN17G2239 Fragaria x ananassa HOM05D004601 ORTHO05D005806 3.2e-35 153.3 103 74.8
MD16G1247900 Malus domestica HOM05D004601 ORTHO05D005806 3.2e-35 153.3 103 74.8
Nn8g40736 Nelumbo nucifera HOM05D004601 ORTHO05D005806 3.2e-35 153.3 101 75.2
PSO063G2966 Papaver somniferum HOM05D004601 ORTHO05D005806 3.2e-35 153.3 101 76.2
PSO170G3696 Papaver somniferum HOM05D004601 ORTHO05D005806 3.2e-35 153.3 101 76.2
CARHR270950 Cardamine hirsuta HOM05D004601 ORTHO05D005806 4.1e-35 152.9 101 75.2
Migut.J00793 Erythranthe guttata HOM05D004601 ORTHO05D005806 4.1e-35 152.9 103 73.8
FvH4_4g07160 Fragaria vesca HOM05D004601 ORTHO05D005806 4.1e-35 152.9 100 77.0
FAN12G1367 Fragaria x ananassa HOM05D004601 ORTHO05D005806 4.1e-35 152.9 100 77.0
MBI16_g10345_MAGBIO Magnolia biondii HOM05D004601 ORTHO05D005806 4.1e-35 152.9 104 72.1
MBI16_g47869_MAGBIO Magnolia biondii HOM05D004601 ORTHO05D005806 4.1e-35 152.9 104 72.1
BcaB08g35989 Brassica carinata HOM05D004601 ORTHO05D005806 5.4e-35 152.5 101 76.2
Atru.chr7.956 Acer truncatum HOM05D004601 ORTHO05D005806 7.0e-35 152.1 104 75.0
Sed0026596 Sechium edule HOM05D004601 ORTHO05D005806 1.2e-34 151.4 104 74.0
AL8G33090 Arabidopsis lyrata HOM05D004601 ORTHO05D005806 1.6e-34 151.0 101 74.3
Aa31LG3G13060 Aethionema arabicum HOM05D004601 ORTHO05D005806 3.5e-34 149.8 101 75.2
FAN22G2150 Fragaria x ananassa HOM05D004601 ORTHO05D005806 4.6e-34 149.4 115 67.8
THA.LOC104817773 Tarenaya hassleriana HOM05D004601 ORTHO05D005806 4.6e-34 149.4 101 75.2
EL10Ac4g10170 Beta vulgaris HOM05D004601 ORTHO05D005806 6.0e-34 149.1 101 71.3
CAN.G285.4 Capsicum annuum HOM05D004601 ORTHO05D005806 6.0e-34 149.1 101 74.3
Duzib150G1331 Durio zibethinus HOM05D004601 ORTHO05D005806 6.0e-34 149.1 104 70.2
Carub.0008s1767 Capsella rubella HOM05D004601 ORTHO05D005806 1.3e-33 147.9 101 73.3
Gohir.D13G212700 Gossypium hirsutum HOM05D004601 ORTHO05D005806 1.3e-33 147.9 104 69.2
Gorai.013G243100 Gossypium raimondii HOM05D004601 ORTHO05D005806 1.3e-33 147.9 104 69.2
ATR0626G236 Amborella trichopoda HOM05D004601 ORTHO05D005806 1.7e-33 147.5 104 70.2
AT5G57160 Arabidopsis thaliana HOM05D004601 ORTHO05D005806 1.7e-33 147.5 101 73.3
Solyc07g017990.3 Solanum lycopersicum HOM05D004601 ORTHO05D005806 2.3e-33 147.1 101 73.3
COL.COLO4_06398 Corchorus olitorius HOM05D004601 ORTHO05D005806 3.0e-33 146.7 104 71.2
Gohir.A13G208300 Gossypium hirsutum HOM05D004601 ORTHO05D005806 3.0e-33 146.7 104 69.2
Zm00001eb071490 Zea mays HOM05D004601 ORTHO05D005806 5.0e-33 146.0 104 70.2
Ah.06g194430 Amaranthus hybridus HOM05D004601 ORTHO05D005806 1.9e-32 144.1 106 69.8
CDE07G0894 Ceratophyllum demersum HOM05D004601 ORTHO05D005806 3.3e-32 143.3 102 73.5
HPP92_021964 Vanilla planifolia HOM05D004601 ORTHO05D005806 5.6e-32 142.5 101 70.3
SEGI_29133 Sequoiadendron giganteum HOM05D004601 ORTHO05D005806 3.6e-31 139.8 108 63.9
AUR62000175 Chenopodium quinoa HOM05D004601 ORTHO05D005806 1.1e-30 138.3 101 69.3
AagrBONN_evm.TU.Sc2ySwM_228.1820 Anthoceros agrestis HOM05D004601 ORTHO05D005806 2.3e-30 137.1 101 66.3
AUR62039835 Chenopodium quinoa HOM05D004601 ORTHO05D005806 4.0e-30 136.3 101 68.3
Mapoly0001s0137 Marchantia polymorpha HOM05D004601 ORTHO05D005806 1.2e-29 134.8 101 66.3
TWI63G1718 Tripterygium wilfordii HOM05D004601 ORTHO05D005806 1.4e-27 127.9 74 79.7
Pp3c14_5920 Physcomitrium patens HOM05D004601 ORTHO05D005806 2.4e-27 127.1 104 61.5
SMO144G0133 Selaginella moellendorffii HOM05D004601 ORTHO05D005806 3.2e-27 126.7 173 45.7
SGA_v2.0_scaffold112G31593 Striga asiatica HOM05D004601 ORTHO05D005806 5.4e-27 125.9 97 68.0
arahy.Tifrunner.gnm1.ann1.BQ8TF8 Arachis hypogaea HOM05D004601 ORTHO05D005806 2.1e-26 124.0 84 75.0
SHI03064 Sapria himalayana HOM05D004601 ORTHO05D005806 1.7e-25 120.9 96 62.5
Lsat_1_v5_gn_8_69120 Lactuca sativa HOM05D004601 ORTHO05D005806 1.4e-19 101.3 74 68.9
ECA236G3967 Erigeron canadensis HOM05D004601 ORTHO05D005806 1.6e-18 97.8 74 66.2
Haze_22027 Corylus avellana HOM05D004601 ORTHO05D005806 1.7e-17 94.4 71 63.4
Psat1g144440 Pisum sativum HOM05D004601 ORTHO05D005806 3.9e-17 93.2 74 62.2
PRCOL_00001076 Prasinoderma coloniale HOM05D004601 ORTHO05D005806 1.1e-16 91.7 102 45.1
ClCG11G011730 Citrullus lanatus HOM05D004601 ORTHO05D005806 1.5e-16 91.3 74 60.8
Lalb_Chr00c63g0413841 Lupinus albus HOM05D004601 ORTHO05D005806 1.5e-16 91.3 74 59.5
Peaxi162Scf00231g01116 Petunia axillaris HOM05D004601 ORTHO05D005806 1.9e-16 90.9 120 48.3
Nitab4.5_0006199g0010 Nicotiana tabacum HOM05D004601 ORTHO05D005806 7.3e-16 89.0 146 38.4
Nitab4.5_0000056g0070 Nicotiana tabacum HOM05D004601 ORTHO05D005806 2.8e-15 87.0 72 58.3
Sopen07g006910 Solanum pennellii HOM05D004601 ORTHO05D005806 2.8e-15 87.0 72 58.3
Sopen07g006920 Solanum pennellii HOM05D004601 ORTHO05D005806 2.8e-15 87.0 72 58.3
CAN.G285.3 Capsicum annuum HOM05D004601 ORTHO05D005806 1.1e-14 85.1 72 56.9
AagrBONN_evm.TU.Sc2ySwM_228.3225 Anthoceros agrestis HOM05D004601 ORTHO05D005806 1.4e-14 84.7 100 39.0
vmacro22649 Vaccinium macrocarpon HOM05D007372 ORTHO05D009318 1.8e-14 84.3 44 88.6
vmacro22532 Vaccinium macrocarpon HOM05D007372 ORTHO05D009318 2.6e-13 80.5 42 88.1
Haze_22030 Corylus avellana HOM05D004601 ORTHO05D005806 9.3e-11 72.0 41 82.9
SEGI_06603 Sequoiadendron giganteum HOM05D004601 ORTHO05D005806 2.1e-10 70.9 54 55.6
Cre10.g433550 Chlamydomonas reinhardtii HOM05D004601 ORTHO05D005806 1.3e-09 68.2 101 40.6
TAR383G0023 Trochodendron aralioides HOM05D004601 ORTHO05D005806 1.6e-07 61.2 39 74.4
Cfa023642 Carpinus fangiana HOM05D004601 ORTHO05D005806 3.6e-07 60.1 136 32.4
Rhsim01G0115200 Rhododendron simsii HOM05D004601 ORTHO05D005806 2.4e-06 57.4 30 96.7


User provided reference genes

Program Settings