Gene: Cfa023642
General Information
Structural Information
- Species Carpinus fangiana
- Gene Identifier Cfa023642
- Transcript Identifier Cfa023642.t1
- Gene Type Coding gene
- Location scaffold14 : 841407-842100 : negative
Gene Family Information
- ID HOM05D004601
- #Genes/#Species 158/96
- Phylogenetic origin
- ID ORTHO05D005806
- #Genes/#Species 152/94
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Cfa023642.t1
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006281 | IEA | InterPro | DNA repair | |
| GO:0006310 | IEA | InterPro | DNA recombination | |
| GO:0071897 | IEA | InterPro | DNA biosynthetic process | |
| GO:0051103 | IEA | InterPro | DNA ligation involved in DNA repair |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003910 | IEA | InterPro | DNA ligase (ATP) activity | |
| GO:0003677 | IEA | InterPro | DNA binding | |
| GO:0005524 | IEA | InterPro | ATP binding |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR012309 | DNA ligase, ATP-dependent, C-terminal |
| IPR001357 | BRCT domain |
| IPR012308 | DNA ligase, ATP-dependent, N-terminal |
| IPR036599 | DNA ligase, ATP-dependent, N-terminal domain superfamily |
| IPR036420 | BRCT domain superfamily |
| IPR000977 | DNA ligase, ATP-dependent |
| IPR029710 | DNA ligase 4 |
| IPR012310 | DNA ligase, ATP-dependent, central |
| IPR012340 | Nucleic acid-binding, OB-fold |
| IPR044125 | DNA Ligase 4, adenylation domain |
| Mapman id | Description |
|---|---|
| 14.4.3.1 | DNA damage response.nonhomologous end-joining (NHEJ) repair.LIG4-XRCC4 ligase complex.DNA ligase component LIG4 |