Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr2g0137421 Rosa chinensis HOM05D007289 ORTHO05D009215 5.8e-201 704.1 386 100.0
FvH4_6g30910 Fragaria vesca HOM05D007289 ORTHO05D009215 3.7e-171 605.1 379 88.1
FAN02G0535 Fragaria x ananassa HOM05D007289 ORTHO05D009215 6.3e-171 604.4 386 86.3
Prupe.3G073900 Prunus persica HOM05D007289 ORTHO05D009215 1.5e-153 546.6 386 75.4
MD17G1197800 Malus domestica HOM05D007289 ORTHO05D009215 1.9e-151 539.7 392 72.4
FAN09G0173 Fragaria x ananassa HOM05D007289 ORTHO05D009215 3.1e-146 522.3 347 86.5
Dinv30529 Davidia involucrata HOM05D007289 ORTHO05D009215 6.6e-120 434.9 392 66.3
vmacro18934 Vaccinium macrocarpon HOM05D007289 ORTHO05D009215 3.6e-118 429.1 390 60.5
CSS0039074 Camellia sinensis var. sinensis HOM05D007289 ORTHO05D009215 2.0e-116 423.3 391 59.8
Lalb_Chr14g0373531 Lupinus albus HOM05D007289 ORTHO05D009215 5.7e-116 421.8 377 62.1
Potri.001G178100 Populus trichocarpa HOM05D007289 ORTHO05D009215 1.7e-115 420.2 370 60.0
QL05p025382 Quercus lobata HOM05D007289 ORTHO05D009215 4.9e-115 418.7 386 62.4
Lalb_Chr22g0351171 Lupinus albus HOM05D007289 ORTHO05D009215 8.3e-115 417.9 375 59.7
VMungo1080G1522 Vigna mungo HOM05D007289 ORTHO05D009215 1.4e-114 417.2 388 58.5
TAR383G0594 Trochodendron aralioides HOM05D007289 ORTHO05D009215 5.4e-114 415.2 399 58.6
CiPaw.02G152300 Carya illinoinensis HOM05D007289 ORTHO05D009215 7.0e-114 414.8 328 65.5
Ca_01106_v3 Cicer arietinum L. HOM05D007289 ORTHO05D009215 7.0e-114 414.8 375 58.9
Phvul.005G172600 Phaseolus vulgaris HOM05D007289 ORTHO05D009215 1.2e-113 414.1 384 58.3
Ciclev10025766m.g Citrus clementina HOM05D007289 ORTHO05D009215 3.5e-113 412.5 378 61.9
TWI75G1369 Tripterygium wilfordii HOM05D007289 ORTHO05D009215 4.6e-113 412.1 376 60.1
Cfa002049 Carpinus fangiana HOM05D007289 ORTHO05D009215 1.0e-112 411.0 382 64.1
Glyma.13G360800 Glycine max HOM05D007289 ORTHO05D009215 1.3e-112 410.6 385 58.4
Lj3g0010801 Lotus japonicus HOM05D007289 ORTHO05D009215 3.0e-112 409.5 393 58.5
Psat5g299280 Pisum sativum HOM05D007289 ORTHO05D009215 3.0e-112 409.5 374 59.1
Rhsim08G0218600 Rhododendron simsii HOM05D007289 ORTHO05D009215 3.0e-112 409.5 396 61.6
Sabra01G0148500 Salix brachista HOM05D007289 ORTHO05D009215 5.0e-112 408.7 373 57.9
Manes.04G121300 Manihot esculenta HOM05D007289 ORTHO05D009215 2.5e-111 406.4 371 59.8
CANSAT56G1700 Cannabis sativa HOM05D007289 ORTHO05D009215 5.6e-111 405.2 388 57.0
Aqoxy7G01850 Aquilegia oxysepala HOM05D007289 ORTHO05D009215 6.8e-109 398.3 392 55.4
Lj9C506T12 Lonicera japonica HOM05D007289 ORTHO05D009215 6.8e-109 398.3 406 56.7
TPR.G37243 Trifolium pratense HOM05D007289 ORTHO05D009215 5.8e-108 395.2 374 56.7
Atru.chr1.3224 Acer truncatum HOM05D007289 ORTHO05D009215 1.3e-107 394.0 386 57.3
arahy.Tifrunner.gnm1.ann1.UJ7D22 Arachis hypogaea HOM05D007289 ORTHO05D009215 6.4e-107 391.7 386 55.2
arahy.Tifrunner.gnm1.ann1.HRS6MU Arachis hypogaea HOM05D007289 ORTHO05D009215 1.4e-106 390.6 386 55.2
Gohir.A02G122500 Gossypium hirsutum HOM05D007289 ORTHO05D009215 9.2e-106 387.9 388 57.5
Medtr2g102430 Medicago truncatula HOM05D007289 ORTHO05D009215 4.6e-105 385.6 370 55.1
Thecc.06G082700 Theobroma cacao HOM05D007289 ORTHO05D009215 2.3e-104 383.3 386 60.4
Gorai.002G058300 Gossypium raimondii HOM05D007289 ORTHO05D009215 3.9e-104 382.5 388 57.0
MELO3C023367.2 Cucumis melo HOM05D007289 ORTHO05D009215 1.5e-103 380.6 388 56.2
COL.COLO4_30328 Corchorus olitorius HOM05D007289 ORTHO05D009215 1.9e-103 380.2 377 56.8
CsaV3_7G033000 Cucumis sativus L. HOM05D007289 ORTHO05D009215 1.2e-102 377.5 388 55.7
Solyc06g066780.3 Solanum lycopersicum HOM05D007289 ORTHO05D009215 1.2e-102 377.5 387 54.0
Sed0021795 Sechium edule HOM05D007289 ORTHO05D009215 1.6e-102 377.1 383 55.9
Hund06601 Selenicereus undatus HOM05D007289 ORTHO05D009215 2.8e-102 376.3 388 53.4
Sopen06g025060 Solanum pennellii HOM05D007289 ORTHO05D009215 4.7e-102 375.6 387 54.0
PGSC0003DMG400016511 Solanum tuberosum HOM05D007289 ORTHO05D009215 8.1e-102 374.8 387 53.5
MBI04_g26647_MAGBIO Magnolia biondii HOM05D007289 ORTHO05D009215 1.8e-101 373.6 376 54.8
Sc12g0009160 Simmondsia chinensis HOM05D007289 ORTHO05D009215 3.1e-101 372.9 390 54.6
PSO782G0119 Papaver somniferum HOM05D007289 ORTHO05D009215 5.2e-101 372.1 373 55.5
DCAR_016227 Daucus carota HOM05D007289 ORTHO05D009215 6.8e-101 371.7 384 53.4
Oeu033497.1 Olea europaea HOM05D007289 ORTHO05D009215 9.9e-100 367.9 328 58.5
Cc04_g03590 Coffea canephora HOM05D007289 ORTHO05D009215 2.9e-99 366.3 380 53.4
Aa31LG4G690 Aethionema arabicum HOM05D007289 ORTHO05D009215 4.9e-99 365.5 385 55.6
Nitab4.5_0002327g0060 Nicotiana tabacum HOM05D007289 ORTHO05D009215 1.4e-98 364.0 387 54.3
GSVIVG01017153001 Vitis vinifera HOM05D007289 ORTHO05D009215 2.4e-98 363.2 336 59.5
CAN.G395.19 Capsicum annuum HOM05D007289 ORTHO05D009215 9.2e-98 361.3 386 53.6
Peaxi162Scf00207g00834 Petunia axillaris HOM05D007289 ORTHO05D009215 9.2e-98 361.3 311 60.8
AL2G41080 Arabidopsis lyrata HOM05D007289 ORTHO05D009215 1.6e-97 360.5 372 55.9
PGR102G0666 Punica granatum HOM05D007289 ORTHO05D009215 2.1e-97 360.1 383 54.8
Actinidia15825 Actinidia chinensis HOM05D002927 ORTHO05D003841 2.7e-97 359.8 325 64.0
C02p37330 Brassica napus HOM05D007289 ORTHO05D009215 2.7e-97 359.8 374 54.8
Thhalv10018735m.g Eutrema salsugineum HOM05D007289 ORTHO05D009215 2.7e-97 359.8 377 53.3
Sp5g35390 Schrenkiella parvula HOM05D007289 ORTHO05D009215 2.7e-97 359.8 369 55.8
MSTRG.11091 Avicennia marina HOM05D007289 ORTHO05D009215 6.0e-97 358.6 383 52.2
CARHR074820 Cardamine hirsuta HOM05D007289 ORTHO05D009215 7.8e-97 358.2 366 55.5
BolC2t09743H Brassica oleracea HOM05D007289 ORTHO05D009215 6.6e-96 355.1 370 54.1
A02p23560 Brassica napus HOM05D007289 ORTHO05D009215 1.1e-95 354.4 370 54.3
BraA02t07349Z Brassica rapa HOM05D007289 ORTHO05D009215 1.1e-95 354.4 370 54.3
THA.LOC104808206 Tarenaya hassleriana HOM05D007289 ORTHO05D009215 1.1e-95 354.4 379 55.4
BcaC03g15968 Brassica carinata HOM05D007289 ORTHO05D009215 4.3e-95 352.4 370 54.1
AT1G80420 Arabidopsis thaliana HOM05D007289 ORTHO05D009215 3.6e-94 349.4 371 54.4
Lsat_1_v5_gn_4_103480 Lactuca sativa HOM05D007289 ORTHO05D009215 6.2e-94 348.6 381 52.0
AUR62016430 Chenopodium quinoa HOM05D007289 ORTHO05D009215 8.9e-93 344.7 392 50.8
Migut.I00845 Erythranthe guttata HOM05D007289 ORTHO05D009215 7.6e-92 341.7 371 52.6
AUR62011614 Chenopodium quinoa HOM05D007289 ORTHO05D009215 9.9e-92 341.3 392 50.3
HanXRQChr16g0501051 Helianthus annuus HOM05D007289 ORTHO05D009215 6.4e-91 338.6 376 51.3
FAN05G4017 Fragaria x ananassa HOM05D007289 ORTHO05D009215 1.1e-90 337.8 209 87.1
ECA232G0523 Erigeron canadensis HOM05D007289 ORTHO05D009215 3.2e-90 336.3 379 52.0
Carub.0002s2715 Capsella rubella HOM05D007289 ORTHO05D009215 1.6e-89 334.0 379 51.5
BcaB05g25270 Brassica carinata HOM05D002927 ORTHO05D003841 6.0e-89 332.0 373 56.8
Nn8g39279 Nelumbo nucifera HOM05D007289 ORTHO05D009215 3.3e-87 326.2 320 58.1
Os06g0144000 Oryza sativa ssp. japonica HOM05D007289 ORTHO05D009215 3.3e-87 326.2 373 49.6
Duzib235G0864 Durio zibethinus HOM05D007289 ORTHO05D009215 4.9e-83 312.4 386 52.1
ATR0037G063 Amborella trichopoda HOM05D007289 ORTHO05D009215 1.9e-82 310.5 319 54.2
EL10Ac9g21988 Beta vulgaris HOM05D007289 ORTHO05D009215 4.2e-82 309.3 460 43.9
PSO339G0085 Papaver somniferum HOM05D007289 ORTHO05D009215 6.0e-81 305.4 275 57.1
CDE02G4373 Ceratophyllum demersum HOM05D004733 ORTHO05D005925 1.3e-80 304.3 324 49.4
Haze_16457 Corylus avellana HOM05D007289 ORTHO05D009215 1.5e-79 300.8 575 40.3
Cpa.g.sc10.164 Carica papaya HOM05D007289 ORTHO05D009215 7.3e-79 298.5 292 54.8
SalBow2G1977 Salvia bowleyana HOM05D007289 ORTHO05D009215 4.5e-76 289.3 375 46.7
SEGI_14605 Sequoiadendron giganteum HOM05D007289 ORTHO05D009215 2.7e-65 253.4 341 44.6
HPP92_000676 Vanilla planifolia HOM05D007289 ORTHO05D009215 1.3e-62 244.6 274 50.0
Glyma.15G013100 Glycine max HOM05D007289 ORTHO05D009215 9.0e-61 238.4 246 54.9
FAN05G4871 Fragaria x ananassa HOM05D007289 ORTHO05D009215 1.7e-59 234.2 155 87.7
Eucgr.F03006 Eucalyptus grandis HOM05D007289 ORTHO05D009215 1.5e-52 211.1 226 52.7
Gohir.D03G073900 Gossypium hirsutum HOM05D007289 ORTHO05D009215 4.5e-52 209.5 205 58.5
Pp3c15_20480 Physcomitrium patens HOM05D007289 ORTHO05D009215 7.7e-52 208.8 309 39.8
TWI12G0812 Tripterygium wilfordii HOM05D007289 ORTHO05D009215 1.6e-49 201.1 197 58.9
ClCG09G002310 Citrullus lanatus HOM05D007289 ORTHO05D009215 6.1e-49 199.1 173 60.1
Nitab4.5_0021849g0010 Nicotiana tabacum HOM05D007289 ORTHO05D009215 1.3e-46 191.4 207 51.7
Mapoly0044s0047 Marchantia polymorpha HOM05D007289 ORTHO05D009215 1.1e-45 188.3 311 36.3
unitig_21.g20513 Utricularia gibba HOM05D007289 ORTHO05D009215 1.0e-40 171.8 374 34.2
ClCG09G002320 Citrullus lanatus HOM05D007289 ORTHO05D009215 3.5e-36 156.8 227 44.9
Zm00001eb377280 Zea mays HOM05D007289 ORTHO05D009215 2.9e-35 153.7 207 43.0
SEGI_13111 Sequoiadendron giganteum HOM05D007289 ORTHO05D009215 8.5e-35 152.1 187 46.5
CBR_g23739 Chara braunii HOM05D007289 ORTHO05D009215 2.0e-31 141.0 102 58.8
Lj2P1136T43 Lonicera japonica HOM05D007289 ORTHO05D009215 2.9e-27 127.1 112 59.8
Ah.01g011120 Amaranthus hybridus HOM05D007289 ORTHO05D009215 3.2e-26 123.6 148 48.0
Hma1.2p1_0845F.1_g227540 Hydrangea macrophylla HOM05D007289 ORTHO05D009215 4.7e-25 119.8 78 71.8
Pp3c21_18730 Physcomitrium patens HOM05D007289 ORTHO05D009215 6.1e-09 66.2 148 30.4
CDE02G2376 Ceratophyllum demersum HOM05D001245 ORTHO05D004475 4.9e-06 56.6 85 36.5


User provided reference genes

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