Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL11p055012 Quercus lobata HOM05D004465 ORTHO05D005450 4.3e-95 351.3 172 100.0
QL02p002453 Quercus lobata HOM05D004465 ORTHO05D005450 4.9e-51 204.9 116 90.5
CiPaw.08G102200 Carya illinoinensis HOM05D004465 ORTHO05D005450 8.4e-51 204.1 116 86.2
Cfa006082 Carpinus fangiana HOM05D004465 ORTHO05D005450 5.4e-50 201.4 116 86.2
Dinv32970 Davidia involucrata HOM05D004465 ORTHO05D005450 7.9e-49 197.6 114 82.5
TAR633G0251 Trochodendron aralioides HOM05D004465 ORTHO05D005450 2.3e-48 196.1 114 83.3
CSS0023645 Camellia sinensis var. sinensis HOM05D004465 ORTHO05D005450 6.7e-48 194.5 114 82.5
CSS0050172 Camellia sinensis var. sinensis HOM05D004465 ORTHO05D005450 6.7e-48 194.5 114 82.5
Hma1.2p1_0628F.1_g191790 Hydrangea macrophylla HOM05D004465 ORTHO05D005450 8.1e-46 187.6 114 78.1
Actinidia24311 Actinidia chinensis HOM05D004465 ORTHO05D005450 4.0e-45 185.3 119 77.3
Nn1g08362 Nelumbo nucifera HOM05D004465 ORTHO05D005450 4.0e-45 185.3 114 79.8
arahy.Tifrunner.gnm1.ann1.N9UI87 Arachis hypogaea HOM05D004465 ORTHO05D005450 5.3e-45 184.9 117 77.8
Glyma.19G152700 Glycine max HOM05D004465 ORTHO05D005450 5.3e-45 184.9 116 75.9
Aqoxy2G03197 Aquilegia oxysepala HOM05D004465 ORTHO05D005450 9.0e-45 184.1 114 77.2
arahy.Tifrunner.gnm1.ann1.CV9AIL Arachis hypogaea HOM05D004465 ORTHO05D005450 1.2e-44 183.7 117 76.1
Ca_09695_v3 Cicer arietinum L. HOM05D004465 ORTHO05D005450 1.2e-44 183.7 116 75.0
Haze_04767 Corylus avellana HOM05D004465 ORTHO05D005450 1.5e-44 183.3 143 69.2
Lalb_Chr12g0205491 Lupinus albus HOM05D004465 ORTHO05D005450 2.0e-44 183.0 116 76.7
Lalb_Chr21g0313041 Lupinus albus HOM05D004465 ORTHO05D005450 2.6e-44 182.6 116 75.9
Medtr4g121550 Medicago truncatula HOM05D004465 ORTHO05D005450 5.8e-44 181.4 116 75.0
Rhsim13G0021500 Rhododendron simsii HOM05D004465 ORTHO05D005450 7.6e-44 181.0 120 75.8
Lj1g0001578 Lotus japonicus HOM05D004465 ORTHO05D005450 2.9e-43 179.1 116 75.9
Prupe.8G247600 Prunus persica HOM05D004465 ORTHO05D005450 3.8e-43 178.7 116 74.1
vmacro02540 Vaccinium macrocarpon HOM05D004465 ORTHO05D005450 4.9e-43 178.3 120 75.8
Eucgr.H01542 Eucalyptus grandis HOM05D004465 ORTHO05D005450 6.4e-43 177.9 116 72.4
Lju41A26G23 Lonicera japonica HOM05D004465 ORTHO05D005450 6.4e-43 177.9 114 75.4
RcHm_v2.0_Chr6g0291951 Rosa chinensis HOM05D004465 ORTHO05D005450 6.4e-43 177.9 116 74.1
FAN27G1503 Fragaria x ananassa HOM05D004465 ORTHO05D005450 8.4e-43 177.6 116 74.1
Phvul.001G147600 Phaseolus vulgaris HOM05D004465 ORTHO05D005450 1.1e-42 177.2 116 73.3
Prupe.8G248900 Prunus persica HOM05D004465 ORTHO05D005450 1.1e-42 177.2 116 74.1
HanXRQChr15g0466601 Helianthus annuus HOM05D004465 ORTHO05D005450 1.4e-42 176.8 121 76.0
FAN15G3052 Fragaria x ananassa HOM05D004465 ORTHO05D005450 2.4e-42 176.0 116 74.1
FAN20G2589 Fragaria x ananassa HOM05D004465 ORTHO05D005450 3.2e-42 175.6 116 73.3
Lsat_1_v5_gn_2_2880 Lactuca sativa HOM05D004465 ORTHO05D005450 4.2e-42 175.3 119 73.9
VMungo1383G2558 Vigna mungo HOM05D004465 ORTHO05D005450 4.2e-42 175.3 116 74.1
PGR119G1155 Punica granatum HOM05D004465 ORTHO05D005450 5.5e-42 174.9 116 70.7
TWI14G0547 Tripterygium wilfordii HOM05D004465 ORTHO05D005450 1.2e-41 173.7 116 73.3
Lsat_1_v5_gn_9_1881 Lactuca sativa HOM05D004465 ORTHO05D005450 1.6e-41 173.3 119 73.1
Cpa.g.sc9.125 Carica papaya HOM05D004465 ORTHO05D005450 3.5e-41 172.2 114 73.7
FvH4_2g24140 Fragaria vesca HOM05D004465 ORTHO05D005450 3.5e-41 172.2 116 72.4
MBI19_g15845_MAGBIO Magnolia biondii HOM05D004465 ORTHO05D005450 3.5e-41 172.2 115 74.8
MD11G1292000 Malus domestica HOM05D004465 ORTHO05D005450 7.9e-41 171.0 116 72.4
SalBow3G2805 Salvia bowleyana HOM05D004465 ORTHO05D005450 7.9e-41 171.0 114 72.8
FAN24G2543 Fragaria x ananassa HOM05D004465 ORTHO05D005450 1.3e-40 170.2 116 72.4
CANSAT25G0403 Cannabis sativa HOM05D004465 ORTHO05D005450 1.8e-40 169.9 116 75.0
Sed0001639 Sechium edule HOM05D004465 ORTHO05D005450 3.0e-40 169.1 117 72.6
Lj1A45T35 Lonicera japonica HOM05D004465 ORTHO05D005450 5.1e-40 168.3 119 68.1
Psat4g023240 Pisum sativum HOM05D004465 ORTHO05D005450 6.7e-40 167.9 116 70.7
PSO302G0160 Papaver somniferum HOM05D004465 ORTHO05D005450 1.5e-39 166.8 115 73.0
ECA247G0279 Erigeron canadensis HOM05D004465 ORTHO05D005450 1.9e-39 166.4 114 72.8
Migut.D00252 Erythranthe guttata HOM05D004465 ORTHO05D005450 1.9e-39 166.4 114 69.3
Cc04_g13300 Coffea canephora HOM05D004465 ORTHO05D005450 3.3e-39 165.6 114 74.6
PSO170G6090 Papaver somniferum HOM05D004465 ORTHO05D005450 3.3e-39 165.6 115 72.2
Cc00_g20190 Coffea canephora HOM05D004465 ORTHO05D005450 4.3e-39 165.2 115 73.0
Psat3g002760 Pisum sativum HOM05D004465 ORTHO05D005450 5.6e-39 164.9 114 70.2
Ciclev10021133m.g Citrus clementina HOM05D004465 ORTHO05D005450 9.6e-39 164.1 114 70.2
SGA_v2.0_scaffold1G00438 Striga asiatica HOM05D004465 ORTHO05D005450 9.6e-39 164.1 114 71.1
Atru.chr5.1333 Acer truncatum HOM05D004465 ORTHO05D005450 2.8e-38 162.5 114 70.2
MELO3C026181.2 Cucumis melo HOM05D004465 ORTHO05D005450 4.8e-38 161.8 117 68.4
GSVIVG01011064001 Vitis vinifera HOM05D004465 ORTHO05D005450 4.8e-38 161.8 114 71.1
CsaV3_4G031760 Cucumis sativus L. HOM05D004465 ORTHO05D005450 6.2e-38 161.4 118 70.3
ClCG04G004880 Citrullus lanatus HOM05D004465 ORTHO05D005450 8.2e-38 161.0 117 68.4
Oeu006227.1 Olea europaea HOM05D004465 ORTHO05D005450 1.1e-37 160.6 115 70.4
Peaxi162Scf00941g00114 Petunia axillaris HOM05D004465 ORTHO05D005450 3.1e-37 159.1 114 68.4
Nitab4.5_0002927g0060 Nicotiana tabacum HOM05D004465 ORTHO05D005450 5.3e-37 158.3 114 68.4
MSTRG.21585 Avicennia marina HOM05D004465 ORTHO05D005450 6.9e-37 157.9 114 65.8
MELO3C008880.2 Cucumis melo HOM05D004465 ORTHO05D005450 9.0e-37 157.5 117 66.7
Nitab4.5_0001323g0060 Nicotiana tabacum HOM05D004465 ORTHO05D005450 1.5e-36 156.8 114 68.4
Potri.003G194400 Populus trichocarpa HOM05D004465 ORTHO05D005450 7.6e-36 154.5 115 68.7
Sopen09g028910 Solanum pennellii HOM05D004465 ORTHO05D005450 7.6e-36 154.5 119 64.7
PGSC0003DMG400003807 Solanum tuberosum HOM05D004465 ORTHO05D005450 7.6e-36 154.5 119 64.7
Gohir.D10G105100 Gossypium hirsutum HOM05D004465 ORTHO05D005450 1.3e-35 153.7 114 69.3
Gorai.011G114800 Gossypium raimondii HOM05D004465 ORTHO05D005450 1.3e-35 153.7 114 69.3
Solyc09g074090.3 Solanum lycopersicum HOM05D004465 ORTHO05D005450 1.3e-35 153.7 119 63.9
Duzib264G0721 Durio zibethinus HOM05D004465 ORTHO05D005450 1.7e-35 153.3 114 68.4
Gohir.A10G082900 Gossypium hirsutum HOM05D004465 ORTHO05D005450 4.9e-35 151.8 114 68.4
Sabra03G0145100 Salix brachista HOM05D004465 ORTHO05D005450 4.9e-35 151.8 115 66.1
Manes.17G011600 Manihot esculenta HOM05D004465 ORTHO05D005450 1.9e-34 149.8 114 64.9
CAN.G956.9 Capsicum annuum HOM05D004465 ORTHO05D005450 3.2e-34 149.1 119 62.2
CDE05G1996 Ceratophyllum demersum HOM05D004465 ORTHO05D005450 3.2e-34 149.1 115 65.2
CDE07G1085 Ceratophyllum demersum HOM05D004465 ORTHO05D005450 5.5e-34 148.3 115 67.0
COL.COLO4_22372 Corchorus olitorius HOM05D004465 ORTHO05D005450 7.1e-34 147.9 114 65.8
Thecc.01G117300 Theobroma cacao HOM05D004465 ORTHO05D005450 7.1e-34 147.9 114 64.9
unitig_0.g1195 Utricularia gibba HOM05D004465 ORTHO05D005450 7.1e-34 147.9 116 62.9
Actinidia00724 Actinidia chinensis HOM05D004465 ORTHO05D005450 9.3e-34 147.5 162 51.9
Hund26620 Selenicereus undatus HOM05D004465 ORTHO05D005450 9.3e-34 147.5 114 67.5
Gohir.A11G223700 Gossypium hirsutum HOM05D004465 ORTHO05D005450 2.1e-33 146.4 114 63.2
Medtr2g093790 Medicago truncatula HOM05D004465 ORTHO05D005450 1.0e-32 144.1 116 62.9
Duzib147G0102 Durio zibethinus HOM05D004465 ORTHO05D005450 1.3e-32 143.7 125 62.4
DCAR_018396 Daucus carota HOM05D004465 ORTHO05D005450 1.8e-32 143.3 103 68.0
THA.LOC104815950 Tarenaya hassleriana HOM05D004465 ORTHO05D005450 1.8e-32 143.3 114 62.3
TPR.G11548 Trifolium pratense HOM05D004465 ORTHO05D005450 3.0e-32 142.5 102 68.6
Gorai.002G150000 Gossypium raimondii HOM05D004465 ORTHO05D005450 3.9e-32 142.1 114 60.5
Os04g0520000 Oryza sativa ssp. japonica HOM05D004465 ORTHO05D005450 8.7e-32 141.0 114 64.0
Gohir.D11G226800 Gossypium hirsutum HOM05D004465 ORTHO05D005450 1.1e-31 140.6 114 60.5
EL10Ac9g22404 Beta vulgaris HOM05D004465 ORTHO05D005450 1.5e-31 140.2 112 65.2
AUR62006496 Chenopodium quinoa HOM05D004465 ORTHO05D005450 3.3e-31 139.0 112 64.3
HPP92_017959 Vanilla planifolia HOM05D004465 ORTHO05D005450 3.3e-31 139.0 116 62.9
Glyma.03G149702 Glycine max HOM05D004465 ORTHO05D005450 9.7e-31 137.5 95 69.5
Carub.0001s0248 Capsella rubella HOM05D004465 ORTHO05D005450 1.3e-30 137.1 114 59.6
Thhalv10008200m.g Eutrema salsugineum HOM05D004465 ORTHO05D005450 2.2e-30 136.3 114 62.3
Aa31LG1G9210 Aethionema arabicum HOM05D004465 ORTHO05D005450 6.3e-30 134.8 114 56.1
AT1G03360 Arabidopsis thaliana HOM05D004465 ORTHO05D005450 8.2e-30 134.4 114 58.8
A10p01910 Brassica napus HOM05D004465 ORTHO05D005450 1.4e-29 133.7 116 58.6
BraA10t42464Z Brassica rapa HOM05D004465 ORTHO05D005450 1.8e-29 133.3 116 58.6
CARHR002730 Cardamine hirsuta HOM05D004465 ORTHO05D005450 1.8e-29 133.3 114 59.6
Sp1g02360 Schrenkiella parvula HOM05D004465 ORTHO05D005450 1.8e-29 133.3 114 58.8
C05p01850 Brassica napus HOM05D004465 ORTHO05D005450 2.4e-29 132.9 114 57.9
AUR62025039 Chenopodium quinoa HOM05D004465 ORTHO05D005450 2.4e-29 132.9 112 61.6
Aa31LG3G11130 Aethionema arabicum HOM05D004465 ORTHO05D005450 3.1e-29 132.5 114 56.1
ATR0626G226 Amborella trichopoda HOM05D004465 ORTHO05D005450 3.1e-29 132.5 116 56.9
BolC5t28966H Brassica oleracea HOM05D004465 ORTHO05D005450 5.3e-29 131.7 116 57.8
BcaC05g24540 Brassica carinata HOM05D004465 ORTHO05D005450 9.0e-29 131.0 114 57.0
AL1G12880 Arabidopsis lyrata HOM05D004465 ORTHO05D005450 1.2e-28 130.6 114 57.9
Oeu047890.1 Olea europaea HOM05D004465 ORTHO05D005450 1.2e-28 130.6 71 81.7
Ah.01g002340 Amaranthus hybridus HOM05D004465 ORTHO05D005450 1.5e-28 130.2 132 56.1
Zm00001eb067490 Zea mays HOM05D004465 ORTHO05D005450 2.9e-27 125.9 114 56.1
SHI31135 Sapria himalayana HOM05D000023 ORTHO05D000014 1.1e-26 124.0 117 53.8
Psat4g225440 Pisum sativum HOM05D004465 ORTHO05D005450 1.9e-26 123.2 116 54.3
Sc14g0002440 Simmondsia chinensis HOM05D004465 ORTHO05D005450 1.9e-26 123.2 114 57.9
SEGI_29460 Sequoiadendron giganteum HOM05D004465 ORTHO05D005450 2.7e-25 119.4 118 52.5
Nitab4.5_0006227g0010 Nicotiana tabacum HOM05D004465 ORTHO05D005450 5.1e-24 115.2 122 51.6
Carub.0002s0706 Capsella rubella HOM05D004465 ORTHO05D005450 1.5e-23 113.6 115 49.6
AL1G67150 Arabidopsis lyrata HOM05D004465 ORTHO05D005450 1.9e-23 113.2 115 51.3
Mapoly0036s0012 Marchantia polymorpha HOM05D004465 ORTHO05D005450 1.2e-20 104.0 115 47.0
BcaC05g24533 Brassica carinata HOM05D001540 ORTHO05D001520 1.5e-20 103.6 64 68.8
CARHR054010 Cardamine hirsuta HOM05D004465 ORTHO05D005450 8.5e-19 97.8 110 47.3
CBR_g31328 Chara braunii HOM05D004465 ORTHO05D000048 8.5e-19 97.8 136 41.9
Pp3c3_30640 Physcomitrium patens HOM05D004465 ORTHO05D005450 1.9e-18 96.7 121 48.8
QL09p052305 Quercus lobata HOM05D004465 ORTHO05D005450 2.7e-17 92.8 72 66.7
BcaC05g24537 Brassica carinata HOM05D004465 ORTHO05D005450 3.6e-17 92.4 114 43.9
CARHR054740 Cardamine hirsuta HOM05D004465 ORTHO05D005450 3.0e-16 89.4 110 45.5
Zm00001eb148160 Zea mays HOM05D004465 ORTHO05D005450 3.0e-16 89.4 94 48.9
CARHR120580 Cardamine hirsuta HOM05D004465 ORTHO05D005450 2.8e-14 82.8 67 55.2
SMO351G0040 Selaginella moellendorffii HOM05D004465 ORTHO05D005450 2.4e-13 79.7 116 36.2
Cre12.g496450 Chlamydomonas reinhardtii HOM05D004465 ORTHO05D005450 3.4e-12 75.9 112 40.2
Haze_26173 Corylus avellana HOM05D004465 ORTHO05D005450 2.1e-09 66.6 126 37.3
ClCG06G018160 Citrullus lanatus HOM05D004465 ORTHO05D005450 7.4e-07 58.2 46 58.7


User provided reference genes

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