Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL10p043267 Quercus lobata HOM05D001053 ORTHO05D008021 2.3e-99 365.5 180 100.0
QL10p043184 Quercus lobata HOM05D001053 ORTHO05D008021 2.0e-87 325.9 159 99.4
QL10p043125 Quercus lobata HOM05D001053 ORTHO05D008021 3.0e-83 312.0 159 94.3
CiPaw.03G120300 Carya illinoinensis HOM05D001053 ORTHO05D008021 1.8e-64 249.6 167 78.4
Haze_25261 Corylus avellana HOM05D001053 ORTHO05D008021 2.0e-58 229.6 158 73.4
Prupe.4G272300 Prunus persica HOM05D001053 ORTHO05D008021 8.2e-49 197.6 171 60.8
MD01G1005700 Malus domestica HOM05D001053 ORTHO05D008021 1.1e-48 197.2 160 63.1
Dinv24384 Davidia involucrata HOM05D001053 ORTHO05D008021 1.9e-45 186.4 150 65.3
CSS0018152 Camellia sinensis var. sinensis HOM05D001053 ORTHO05D008021 3.2e-45 185.7 160 60.6
FvH4_1g24510 Fragaria vesca HOM05D001053 ORTHO05D008021 3.2e-45 185.7 165 57.6
RcHm_v2.0_Chr2g0121851 Rosa chinensis HOM05D001053 ORTHO05D008021 4.2e-45 185.3 159 59.7
FAN19G0875 Fragaria x ananassa HOM05D001053 ORTHO05D008021 5.5e-45 184.9 159 59.7
Duzib264G1089 Durio zibethinus HOM05D001053 ORTHO05D008021 3.0e-43 179.1 174 55.2
Duzib264G0077 Durio zibethinus HOM05D001053 ORTHO05D008021 1.2e-42 177.2 174 54.6
GSVIVG01026467001 Vitis vinifera HOM05D001053 ORTHO05D008021 4.4e-42 175.3 150 60.0
Gohir.A05G383400 Gossypium hirsutum HOM05D001053 ORTHO05D008021 6.3e-41 171.4 174 52.3
TAR628G1683 Trochodendron aralioides HOM05D001053 ORTHO05D008021 8.2e-41 171.0 156 57.1
COL.COLO4_35764 Corchorus olitorius HOM05D001053 ORTHO05D008021 1.1e-40 170.6 174 53.4
Gorai.012G036200 Gossypium raimondii HOM05D001053 ORTHO05D008021 7.0e-40 167.9 174 52.3
Atru.chr4.871 Acer truncatum HOM05D001053 ORTHO05D008021 1.6e-39 166.8 170 55.3
Gohir.D04G031900 Gossypium hirsutum HOM05D001053 ORTHO05D008021 1.6e-39 166.8 174 51.7
Ca_17631_v3 Cicer arietinum L. HOM05D001053 ORTHO05D008021 2.9e-38 162.5 162 51.9
Psat7g045760 Pisum sativum HOM05D001053 ORTHO05D008021 2.9e-38 162.5 164 53.0
TWI79G0588 Tripterygium wilfordii HOM05D001053 ORTHO05D008021 3.8e-38 162.2 150 56.0
FAN28G2289 Fragaria x ananassa HOM05D001053 ORTHO05D008021 8.5e-38 161.0 133 61.7
Medtr8g093800 Medicago truncatula HOM05D001053 ORTHO05D008021 1.6e-36 156.8 176 51.1
PGR102G3106 Punica granatum HOM05D001053 ORTHO05D008021 5.2e-35 151.8 151 53.0
Ciclev10001184m.g Citrus clementina HOM05D001053 ORTHO05D008021 6.8e-35 151.4 174 50.0
Glyma.05G192600 Glycine max HOM05D001053 ORTHO05D008021 6.8e-35 151.4 163 55.8
Sabra05G0053500 Salix brachista HOM05D001053 ORTHO05D008021 2.6e-34 149.4 107 72.0
Cc07_g18770 Coffea canephora HOM05D001053 ORTHO05D008021 5.7e-34 148.3 160 51.2
Nn5g28508 Nelumbo nucifera HOM05D001053 ORTHO05D008021 9.8e-34 147.5 146 53.4
Potri.005G064200 Populus trichocarpa HOM05D001053 ORTHO05D008021 9.8e-34 147.5 107 71.0
Nitab4.5_0003575g0030 Nicotiana tabacum HOM05D001053 ORTHO05D008021 2.2e-33 146.4 163 47.2
Sc19g0005860 Simmondsia chinensis HOM05D001053 ORTHO05D008021 2.2e-33 146.4 158 44.9
VMungo0251G0496 Vigna mungo HOM05D001053 ORTHO05D008021 2.8e-33 146.0 152 55.3
Phvul.002G273200 Phaseolus vulgaris HOM05D001053 ORTHO05D008021 3.7e-33 145.6 174 51.1
arahy.Tifrunner.gnm1.ann1.JNKP0R Arachis hypogaea HOM05D001053 ORTHO05D008021 8.3e-33 144.4 110 65.5
arahy.Tifrunner.gnm1.ann1.YLDT1P Arachis hypogaea HOM05D001053 ORTHO05D008021 8.3e-33 144.4 110 65.5
Solyc01g009120.3 Solanum lycopersicum HOM05D001053 ORTHO05D008021 1.1e-32 144.1 153 49.7
Sopen01g004600 Solanum pennellii HOM05D001053 ORTHO05D008021 1.1e-32 144.1 153 49.0
Thecc.01G134400 Theobroma cacao HOM05D001053 ORTHO05D008021 1.8e-32 143.3 136 57.4
THA.LOC104819490 Tarenaya hassleriana HOM05D001053 ORTHO05D008021 3.1e-32 142.5 160 50.6
Ah.02g121650 Amaranthus hybridus HOM05D001053 ORTHO05D008021 1.6e-31 140.2 148 49.3
Lj4g0011583 Lotus japonicus HOM05D001053 ORTHO05D008021 4.5e-31 138.7 103 68.9
vmacro12791 Vaccinium macrocarpon HOM05D001053 ORTHO05D008021 5.9e-31 138.3 206 41.3
Aqoxy5G02258 Aquilegia oxysepala HOM05D001053 ORTHO05D008021 7.7e-31 137.9 164 51.2
CANSAT56G3272 Cannabis sativa HOM05D001053 ORTHO05D008021 1.0e-30 137.5 99 67.7
CAN.G102.6 Capsicum annuum HOM05D001053 ORTHO05D008021 1.7e-30 136.7 145 49.7
CARHR241550 Cardamine hirsuta HOM05D001053 ORTHO05D008021 1.7e-30 136.7 98 68.4
Peaxi162Scf00119g00944 Petunia axillaris HOM05D001053 ORTHO05D008021 5.0e-30 135.2 148 49.3
Lalb_Chr16g0392561 Lupinus albus HOM05D001053 ORTHO05D008021 6.5e-30 134.8 98 65.3
MBI03_g20845_MAGBIO Magnolia biondii HOM05D001053 ORTHO05D008021 1.1e-29 134.0 160 47.5
Actinidia06612 Actinidia chinensis HOM05D001053 ORTHO05D008021 1.5e-29 133.7 77 80.5
Carub.0007s0700 Capsella rubella HOM05D001053 ORTHO05D008021 1.5e-29 133.7 99 64.6
TPR.G37345 Trifolium pratense HOM05D001053 ORTHO05D008021 1.9e-29 133.3 98 66.3
AL7G18080 Arabidopsis lyrata HOM05D001053 ORTHO05D008021 2.5e-29 132.9 98 63.3
Sp7g31180 Schrenkiella parvula HOM05D001053 ORTHO05D008021 7.2e-29 131.3 141 50.4
CSS0040168 Camellia sinensis var. sinensis HOM05D001053 ORTHO05D008021 9.5e-29 131.0 127 54.3
C01p05210 Brassica napus HOM05D001053 ORTHO05D008021 1.2e-28 130.6 98 64.3
BolC1t00500H Brassica oleracea HOM05D006516 ORTHO05D008021 1.2e-28 130.6 98 64.3
AUR62003584 Chenopodium quinoa HOM05D001053 ORTHO05D008021 1.2e-28 130.6 117 58.1
Thhalv10025266m.g Eutrema salsugineum HOM05D001053 ORTHO05D008021 1.2e-28 130.6 98 64.3
A01p04800 Brassica napus HOM05D001053 ORTHO05D008021 1.6e-28 130.2 98 64.3
DCAR_001205 Daucus carota HOM05D001053 ORTHO05D008021 1.6e-28 130.2 96 64.6
AT4G33470 Arabidopsis thaliana HOM05D001053 ORTHO05D008021 2.1e-28 129.8 98 64.3
BcaC09g52163 Brassica carinata HOM05D001053 ORTHO05D008021 2.8e-28 129.4 98 63.3
BraA01t00463Z Brassica rapa HOM05D001053 ORTHO05D008021 4.7e-28 128.6 98 63.3
SalBow1G2034 Salvia bowleyana HOM05D001053 ORTHO05D008021 1.0e-27 127.5 174 44.3
Eucgr.J01293 Eucalyptus grandis HOM05D001053 ORTHO05D008021 5.2e-27 125.2 114 57.9
ECA240G4797 Erigeron canadensis HOM05D003483 ORTHO05D008021 8.8e-27 124.4 106 60.4
Lsat_1_v5_gn_2_37440 Lactuca sativa HOM05D001053 ORTHO05D008021 8.8e-27 124.4 117 53.8
Aa31sc146G20 Aethionema arabicum HOM05D001053 ORTHO05D008021 3.4e-26 122.5 115 57.4
Os12g0182700 Oryza sativa ssp. japonica HOM05D001053 ORTHO05D008021 7.5e-26 121.3 105 55.2
PSO170G2800 Papaver somniferum HOM05D001053 ORTHO05D008021 1.7e-25 120.2 77 74.0
ClCG01G015340 Citrullus lanatus HOM05D001053 ORTHO05D008021 2.2e-25 119.8 108 52.8
MELO3C008064.2 Cucumis melo HOM05D001053 ORTHO05D008021 6.3e-25 118.2 108 51.9
CsaV3_6G041560 Cucumis sativus L. HOM05D001053 ORTHO05D008021 1.1e-24 117.5 108 50.0
Sed0008132 Sechium edule HOM05D001053 ORTHO05D008021 1.1e-24 117.5 79 67.1
Migut.H00692 Erythranthe guttata HOM05D001053 ORTHO05D008021 9.2e-24 114.4 96 54.2
HanXRQChr14g0433381 Helianthus annuus HOM05D001053 ORTHO05D008021 1.6e-23 113.6 91 60.4
Lj1g0009434 Lotus japonicus HOM05D001053 ORTHO05D008021 4.5e-23 112.1 122 54.9
Zm00001eb148900 Zea mays HOM05D001053 ORTHO05D008021 7.8e-23 111.3 128 44.5
FAN26G1915 Fragaria x ananassa HOM05D001053 ORTHO05D008021 2.9e-22 109.4 64 78.1
Oeu058292.1 Olea europaea HOM05D001053 ORTHO05D008021 2.1e-20 103.2 68 75.0
PSO063G1915 Papaver somniferum HOM05D001053 ORTHO05D008021 2.1e-20 103.2 65 75.4
unitig_899.g14678 Utricularia gibba HOM05D001053 ORTHO05D008021 2.8e-20 102.8 109 48.6
EL10Ac6g15291 Beta vulgaris HOM05D001053 ORTHO05D008021 4.7e-20 102.1 170 41.2
Pp3c21_17500 Physcomitrium patens HOM05D001053 ORTHO05D008021 4.7e-20 102.1 119 46.2
Manes.12G156900 Manihot esculenta HOM05D001053 ORTHO05D008021 1.4e-19 100.5 106 50.9
PGSC0003DMG401005535 Solanum tuberosum HOM05D001053 ORTHO05D008021 5.2e-19 98.6 121 46.3
AUR62017897 Chenopodium quinoa HOM05D001053 ORTHO05D008021 2.6e-18 96.3 74 67.6
AagrBONN_evm.TU.Sc2ySwM_368.1571 Anthoceros agrestis HOM05D001053 ORTHO05D008021 3.4e-18 95.9 82 54.9
Nitab4.5_0000504g0020 Nicotiana tabacum HOM05D001053 ORTHO05D008021 5.7e-18 95.1 60 73.3
SGA_v2.0_scaffold370G50105 Striga asiatica HOM05D001053 ORTHO05D008021 1.7e-17 93.6 60 75.0
SEGI_25913 Sequoiadendron giganteum HOM05D001053 ORTHO05D008021 3.7e-17 92.4 98 46.9
CBR_g34011 Chara braunii HOM05D001053 ORTHO05D008021 1.1e-16 90.9 78 51.3
SMO232G0082 Selaginella moellendorffii HOM05D001053 ORTHO05D008021 2.4e-16 89.7 103 45.6
Cpa.g.sc42.168 Carica papaya HOM05D001053 ORTHO05D008021 3.2e-16 89.4 73 61.6
ATR0709G070 Amborella trichopoda HOM05D001053 ORTHO05D008021 5.6e-13 78.6 70 51.4
Mapoly0029s0117 Marchantia polymorpha HOM05D001053 ORTHO05D008021 8.9e-11 71.2 118 34.7
SMO241G0005 Selaginella moellendorffii HOM05D003473 ORTHO05D003872 2.0e-10 70.1 88 46.6
PSO357G0201 Papaver somniferum HOM05D001325 ORTHO05D001540 1.3e-09 67.4 72 50.0
PSO170G5129 Papaver somniferum HOM05D001325 ORTHO05D001540 3.7e-09 65.9 72 47.2
PSO384G1460 Papaver somniferum HOM05D001325 ORTHO05D001540 5.4e-08 62.0 104 35.6
SMO232G0037 Selaginella moellendorffii HOM05D003473 ORTHO05D003872 2.7e-07 59.7 72 44.4


User provided reference genes

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