Gene: PGR102G3106

General Information

Structural Information

  • Species Punica granatum
  • Gene Identifier PGR102G3106
  • Transcript Identifier PGR102G3106.01
  • Gene Type Coding gene
  • Location NC_045129.1 : 6241694-6245859 : positive

Gene Family Information

  • ID HOM05D001053
  • #Genes/#Species 576/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • pid XP_031387437.1
  • name LOC116200721
  • name XM_031531577.1
  • id gene-LOC116200721
  • uniprot A0A6P8CS42

Descriptions

  • product histone deacetylase 14
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0030186
ISO
PLAZA Integrative Orthologymelatonin metabolic process AT4G33470
GO:0070932
IEA
GOA Databasehistone H3 deacetylation
GO:0090042
ISO
PLAZA Integrative Orthologytubulin deacetylation AT4G33470
GO:0006476
ISO
PLAZA Integrative Orthologyprotein deacetylation AT4G33470
GO:0042548
ISO
PLAZA Integrative Orthologyregulation of photosynthesis, light reaction AT4G33470
GO:0006325
IEA
GOA Databasechromatin organization
GO:0016575
IEA
GOA Databasehistone deacetylation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0043621
ISO
PLAZA Integrative Orthologyprotein self-association AT4G33470
GO:0051721
ISO
PLAZA Integrative Orthologyprotein phosphatase 2A binding AT4G33470
GO:0033558
ISO
PLAZA Integrative Orthologyprotein deacetylase activity AT4G33470
GO:0019213
ISO
PLAZA Integrative Orthologydeacetylase activity AT4G33470
GO:0048487
ISO
PLAZA Integrative Orthologybeta-tubulin binding AT4G33470
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT4G33470
GO:0043014
ISO
PLAZA Integrative Orthologyalpha-tubulin binding AT4G33470
GO:0042903
ISO
PLAZA Integrative Orthologytubulin deacetylase activity AT4G33470
GO:0032041
IEA
GOA DatabaseNAD-dependent histone deacetylase activity (H3-K14 specific)
GO:0004407
IEA
GOA Databasehistone deacetylase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT4G33470
GO:0005739
ISO
PLAZA Integrative Orthologymitochondrion AT4G33470
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT4G33470
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT4G33470
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT4G33470
GO:0009570
ISO
PLAZA Integrative Orthologychloroplast stroma AT4G33470

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR023696 Ureohydrolase domain superfamily
IPR037138 Histone deacetylase domain superfamily
IPR023801 Histone deacetylase domain
IPR000286 Histone deacetylase family
Mapman id Description
12.3.2.1.2 Chromatin organisation.post-translational histone modification.histone deacetylation.HD1 histone deacetylase family.class-II histone deacetylase