Gene: MELO3C008064.2

General Information

Structural Information

  • Species Cucumis melo
  • Gene Identifier MELO3C008064.2
  • Transcript Identifier MELO3C008064.2.1
  • Gene Type Coding gene
  • Location chr08 : 7323740-7332685 : positive

Gene Family Information

  • ID HOM05D001053
  • #Genes/#Species 576/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid MELO3C008064.2.1
  • uniprot A0A1S3B3B9

Descriptions

  • Description Histone deacetylase, putative
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0030186
IEA
GOA Databasemelatonin metabolic process
GO:0006476
IEA
GOA Databaseprotein deacetylation
GO:0070932
IEA
GOA Databasehistone H3 deacetylation
GO:0042548
IEA
GOA Databaseregulation of photosynthesis, light reaction
GO:0090042
IEA
GOA Databasetubulin deacetylation
GO:0006325
IEA
GOA Databasechromatin organization
GO:0016575
IEA
GOA Databasehistone deacetylation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0043014
IEA
GOA Databasealpha-tubulin binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT4G33470
GO:0019213
IEA
GOA Databasedeacetylase activity
GO:0033558
IEA
GOA Databaseprotein deacetylase activity
GO:0042903
IEA
GOA Databasetubulin deacetylase activity
GO:0043621
IEA
GOA Databaseprotein self-association
GO:0048487
IEA
GOA Databasebeta-tubulin binding
GO:0051721
IEA
GOA Databaseprotein phosphatase 2A binding
GO:0032041
IEA
GOA DatabaseNAD-dependent histone deacetylase activity (H3-K14 specific)
GO:0004407
IEA
GOA Databasehistone deacetylase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005737
IEA
GOA Databasecytoplasm
GO:0005829
IEA
GOA Databasecytosol
GO:0009507
IEA
GOA Databasechloroplast
GO:0005739
IEA
GOA Databasemitochondrion
GO:0009570
IEA
GOA Databasechloroplast stroma

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR023696 Ureohydrolase domain superfamily
IPR023801 Histone deacetylase domain
IPR037138 Histone deacetylase domain superfamily
IPR000286 Histone deacetylase family
Mapman id Description
12.3.2.1.2 Chromatin organisation.post-translational histone modification.histone deacetylation.HD1 histone deacetylase family.class-II histone deacetylase