Gene: AT4G33470

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT4G33470
  • Transcript Identifier AT4G33470.1
  • Gene Type Coding gene
  • Location Chr4 : 16102774-16105439 : negative

Gene Family Information

  • ID HOM05D001053
  • #Genes/#Species 576/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT4G33470.1
  • symbol HDA14
  • Alias ATHDA14
  • uniprot Q941D6

Descriptions

  • Description histone deacetylase 14
  • Computational description histone deacetylase 14 (hda14); FUNCTIONS IN: histone deacetylase activity; INVOLVED IN: histone deacetylation; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone deacetylase superfamily (InterPro:IPR000286); BEST Arabidopsis thaliana protein match is: histone deacetylase 5 (TAIR:AT5G61060.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0042548
IMP
Gene Ontologyregulation of photosynthesis, light reaction1
GO:0030186
IEA
GOA Databasemelatonin metabolic process
GO:0030186
IDA
Gene Ontologymelatonin metabolic process2
GO:0070932
IEA
GOA Databasehistone H3 deacetylation
GO:0016575
IEA
GOA Databasehistone deacetylation
GO:0006325
IEA
GOA Databasechromatin organization
GO:0006476
IDA
Gene Ontologyprotein deacetylation1
GO:0090042
IDA
Gene Ontologytubulin deacetylation3

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0033558
IDA
Gene Ontologyprotein deacetylase activity1
GO:0019213
IEA
GOA Databasedeacetylase activity
GO:0019213
IDA
Gene Ontologydeacetylase activity2
GO:0008270
ISS
Gene Ontologyzinc ion binding4
GO:0004407
IEA
GOA Databasehistone deacetylase activity
GO:0004407
ISS
Gene Ontologyhistone deacetylase activity5
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0051721
IDA
Gene Ontologyprotein phosphatase 2A binding3
GO:0048487
IDA
Gene Ontologybeta-tubulin binding3
GO:0043621
IPI
Gene Ontologyprotein self-association3
GO:0043014
IDA
Gene Ontologyalpha-tubulin binding3
GO:0042903
IDA
Gene Ontologytubulin deacetylase activity3
GO:0005515
IPI
Gene Ontologyprotein binding3
GO:0032041
IEA
Gene OntologyNAD-dependent histone deacetylase activity (H3-K14 specific)

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
IDA
ISM
Gene Ontologynucleus3
GO:0009570
IDA
Gene Ontologychloroplast stroma1
GO:0009507
IDA
IEA
GOA Databasechloroplast
GO:0009507
HDA
Gene Ontologychloroplast6
GO:0005739
IEA
GOA Databasemitochondrion
GO:0005739
IDA
Gene Ontologymitochondrion1
GO:0005829
IDA
Gene Ontologycytosol3
GO:0005737
IDA
Gene Ontologycytoplasm7

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000286 Histone deacetylase family
IPR023801 Histone deacetylase domain
IPR037138 Histone deacetylase domain superfamily
IPR023696 Ureohydrolase domain superfamily
Mapman id Description
12.3.2.1.2 Chromatin organisation.post-translational histone modification.histone deacetylation.HD1 histone deacetylase family.class-II histone deacetylase