Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL10p037139 Quercus lobata HOM05D000282 ORTHO05D004791 2.3e-31 138.3 69 100.0
Ah.05g179880 Amaranthus hybridus HOM05D000282 ORTHO05D004791 4.0e-28 127.5 69 92.8
EL10Ac1g00313 Beta vulgaris HOM05D000282 ORTHO05D004791 4.0e-28 127.5 69 92.8
AUR62023497 Chenopodium quinoa HOM05D000282 ORTHO05D004791 4.0e-28 127.5 69 92.8
MBI07_g09923_MAGBIO Magnolia biondii HOM05D000282 ORTHO05D004791 4.0e-28 127.5 69 92.8
Rhsim07G0006700 Rhododendron simsii HOM05D000282 ORTHO05D004791 4.0e-28 127.5 69 92.8
Hund16696 Selenicereus undatus HOM05D000282 ORTHO05D004791 4.0e-28 127.5 69 92.8
vmacro13149 Vaccinium macrocarpon HOM05D000282 ORTHO05D004791 4.0e-28 127.5 69 92.8
vmacro13193 Vaccinium macrocarpon HOM05D000282 ORTHO05D004791 4.0e-28 127.5 69 92.8
SalBow3G2106 Salvia bowleyana HOM05D000282 ORTHO05D004791 4.4e-27 124.0 69 91.3
AUR62004452 Chenopodium quinoa HOM05D000282 ORTHO05D004791 9.9e-27 122.9 70 91.4
SGA_v2.0_scaffold48G17909 Striga asiatica HOM05D000282 ORTHO05D004791 9.9e-27 122.9 69 89.9
Oeu045482.2 Olea europaea HOM05D000282 ORTHO05D004791 6.4e-26 120.2 69 91.3
Haze_15621 Corylus avellana HOM05D000282 ORTHO05D004791 1.4e-25 119.0 80 80.0
Sabra14G0069500 Salix brachista HOM05D000282 ORTHO05D004791 1.4e-25 119.0 80 80.0
Lsat_1_v5_gn_7_1921 Lactuca sativa HOM05D000282 ORTHO05D004791 5.4e-25 117.1 80 78.8
MBI15_g37228_MAGBIO Magnolia biondii HOM05D000282 ORTHO05D004791 5.4e-25 117.1 80 77.5
ATR0069G056 Amborella trichopoda HOM05D000282 ORTHO05D004791 9.2e-25 116.3 87 73.6
CSS0024011 Camellia sinensis var. sinensis HOM05D000282 ORTHO05D004791 9.2e-25 116.3 87 73.6
CSS0036656 Camellia sinensis var. sinensis HOM05D000282 ORTHO05D004791 9.2e-25 116.3 87 73.6
CAN.G352.6 Capsicum annuum HOM05D000282 ORTHO05D004791 9.2e-25 116.3 87 73.6
Cfa003833 Carpinus fangiana HOM05D000282 ORTHO05D004791 9.2e-25 116.3 87 73.6
CiPaw.01G072200 Carya illinoinensis HOM05D000282 ORTHO05D004791 9.2e-25 116.3 87 73.6
CDE02G4105 Ceratophyllum demersum HOM05D000282 ORTHO05D004791 9.2e-25 116.3 87 73.6
CDE09G0145 Ceratophyllum demersum HOM05D000282 ORTHO05D004791 9.2e-25 116.3 87 73.6
ClCG05G001100 Citrullus lanatus HOM05D000282 ORTHO05D004791 9.2e-25 116.3 87 73.6
Ciclev10019995m.g Citrus clementina HOM05D000282 ORTHO05D004791 9.2e-25 116.3 87 73.6
COL.COLO4_06331 Corchorus olitorius HOM05D000282 ORTHO05D004791 9.2e-25 116.3 87 73.6
MELO3C006063.2 Cucumis melo HOM05D000282 ORTHO05D004791 9.2e-25 116.3 87 73.6
CsaV3_3G008430 Cucumis sativus L. HOM05D000282 ORTHO05D004791 9.2e-25 116.3 87 73.6
Dinv09393 Davidia involucrata HOM05D000282 ORTHO05D004791 9.2e-25 116.3 87 73.6
Duzib133G0471 Durio zibethinus HOM05D000282 ORTHO05D004791 9.2e-25 116.3 87 73.6
Duzib138G0443 Durio zibethinus HOM05D000282 ORTHO05D004791 9.2e-25 116.3 87 73.6
FvH4_7g15920 Fragaria vesca HOM05D000282 ORTHO05D004791 9.2e-25 116.3 87 73.6
FAN06G3555 Fragaria x ananassa HOM05D000282 ORTHO05D004791 9.2e-25 116.3 87 73.6
FAN06G5129 Fragaria x ananassa HOM05D000282 ORTHO05D004791 9.2e-25 116.3 87 73.6
FAN10G2511 Fragaria x ananassa HOM05D000282 ORTHO05D004791 9.2e-25 116.3 87 73.6
FAN10G4217 Fragaria x ananassa HOM05D000282 ORTHO05D004791 9.2e-25 116.3 87 73.6
Gohir.A11G094800 Gossypium hirsutum HOM05D000282 ORTHO05D004791 9.2e-25 116.3 87 73.6
Gohir.D11G099800 Gossypium hirsutum HOM05D000282 ORTHO05D004791 9.2e-25 116.3 87 73.6
Gorai.007G106000 Gossypium raimondii HOM05D000282 ORTHO05D004791 9.2e-25 116.3 87 73.6
MD01G1076100 Malus domestica HOM05D000282 ORTHO05D004791 9.2e-25 116.3 87 73.6
Manes.01G249000 Manihot esculenta HOM05D000282 ORTHO05D004791 9.2e-25 116.3 87 73.6
Nn3g19105 Nelumbo nucifera HOM05D000282 ORTHO05D004791 9.2e-25 116.3 87 73.6
PSO384G3855 Papaver somniferum HOM05D000282 ORTHO05D004791 9.2e-25 116.3 87 73.6
PSO713G0028 Papaver somniferum HOM05D000282 ORTHO05D004791 9.2e-25 116.3 87 73.6
Potri.002G167800 Populus trichocarpa HOM05D000282 ORTHO05D004791 9.2e-25 116.3 87 73.6
Potri.014G094900 Populus trichocarpa HOM05D000282 ORTHO05D004791 9.2e-25 116.3 87 73.6
Prupe.1G559600 Prunus persica HOM05D000282 ORTHO05D004791 9.2e-25 116.3 87 73.6
Prupe.2G100900 Prunus persica HOM05D000282 ORTHO05D004791 9.2e-25 116.3 87 73.6
QL04p058632 Quercus lobata HOM05D000282 ORTHO05D004791 9.2e-25 116.3 87 73.6
QL04p059427 Quercus lobata HOM05D000282 ORTHO05D004791 9.2e-25 116.3 87 73.6
RcHm_v2.0_Chr1g0358791 Rosa chinensis HOM05D000282 ORTHO05D004791 9.2e-25 116.3 87 73.6
Sed0019380 Sechium edule HOM05D000282 ORTHO05D004791 9.2e-25 116.3 87 73.6
Solyc03g111380.3 Solanum lycopersicum HOM05D000282 ORTHO05D004791 9.2e-25 116.3 87 73.6
Sopen03g030510 Solanum pennellii HOM05D000282 ORTHO05D004791 9.2e-25 116.3 87 73.6
PGSC0003DMG400015180 Solanum tuberosum HOM05D000282 ORTHO05D004791 9.2e-25 116.3 87 73.6
THA.LOC104817337 Tarenaya hassleriana HOM05D000282 ORTHO05D004791 9.2e-25 116.3 87 73.6
Thecc.01G347400 Theobroma cacao HOM05D000282 ORTHO05D004791 9.2e-25 116.3 87 73.6
TWI81G0677 Tripterygium wilfordii HOM05D000282 ORTHO05D004791 9.2e-25 116.3 87 73.6
TAR375G0782 Trochodendron aralioides HOM05D000282 ORTHO05D004791 9.2e-25 116.3 87 73.6
TAR636G2021 Trochodendron aralioides HOM05D000282 ORTHO05D004791 9.2e-25 116.3 87 73.6
GSVIVG01027050001 Vitis vinifera HOM05D000282 ORTHO05D004791 9.2e-25 116.3 87 73.6
Zm00001eb345620 Zea mays HOM05D000282 ORTHO05D004791 9.2e-25 116.3 87 73.6
Zm00001eb218240 Zea mays HOM05D000282 ORTHO05D013245 1.2e-24 115.9 87 72.4
Zm00001eb265950 Zea mays HOM05D000282 ORTHO05D004791 1.2e-24 115.9 87 72.4
Zm00001eb282650 Zea mays HOM05D000282 ORTHO05D004791 1.2e-24 115.9 87 72.4
Actinidia20198 Actinidia chinensis HOM05D000282 ORTHO05D004791 1.6e-24 115.5 89 71.9
CiPaw.02G038600 Carya illinoinensis HOM05D000282 ORTHO05D004791 2.1e-24 115.2 90 71.1
Peaxi162Scf00089g00639 Petunia axillaris HOM05D000282 ORTHO05D004791 2.1e-24 115.2 87 72.4
Rhsim01G0169600 Rhododendron simsii HOM05D000282 ORTHO05D004791 2.1e-24 115.2 87 72.4
Sc01g0002960 Simmondsia chinensis HOM05D000282 ORTHO05D004791 2.1e-24 115.2 87 72.4
Eucgr.E00075 Eucalyptus grandis HOM05D000282 ORTHO05D004791 2.7e-24 114.8 87 72.4
Gohir.D12G114100 Gossypium hirsutum HOM05D000282 ORTHO05D004791 2.7e-24 114.8 87 72.4
Gorai.008G123600 Gossypium raimondii HOM05D000282 ORTHO05D004791 2.7e-24 114.8 87 72.4
Lalb_Chr04g0261761 Lupinus albus HOM05D000282 ORTHO05D004791 2.7e-24 114.8 87 71.3
Manes.05G025900 Manihot esculenta HOM05D000282 ORTHO05D004791 2.7e-24 114.8 87 72.4
HPP92_012678 Vanilla planifolia HOM05D000282 ORTHO05D004791 2.7e-24 114.8 87 72.4
Actinidia10105 Actinidia chinensis HOM05D000282 ORTHO05D004791 3.5e-24 114.4 86 73.3
Aqoxy7G00158 Aquilegia oxysepala HOM05D000282 ORTHO05D004791 3.5e-24 114.4 87 72.4
AL5G44050 Arabidopsis lyrata HOM05D000282 ORTHO05D004791 3.5e-24 114.4 87 72.4
AL6G15510 Arabidopsis lyrata HOM05D000282 ORTHO05D004791 3.5e-24 114.4 87 72.4
AT3G61650 Arabidopsis thaliana HOM05D000282 ORTHO05D004791 3.5e-24 114.4 87 72.4
AT5G05620 Arabidopsis thaliana HOM05D000282 ORTHO05D004791 3.5e-24 114.4 87 72.4
CANSAT56G4294 Cannabis sativa HOM05D000282 ORTHO05D004791 3.5e-24 114.4 87 72.4
Carub.0005s2834 Capsella rubella HOM05D000282 ORTHO05D004791 3.5e-24 114.4 87 72.4
Carub.0006s0452 Capsella rubella HOM05D000282 ORTHO05D004791 3.5e-24 114.4 87 72.4
CARHR004860 Cardamine hirsuta HOM05D000282 ORTHO05D004791 3.5e-24 114.4 87 72.4
Thhalv10005943m.g Eutrema salsugineum HOM05D000282 ORTHO05D004791 3.5e-24 114.4 87 72.4
HanXRQChr15g0472351 Helianthus annuus HOM05D000282 ORTHO05D004791 3.5e-24 114.4 87 72.4
Hma1.2p1_0077F.1_g039810 Hydrangea macrophylla HOM05D000282 ORTHO05D004791 3.5e-24 114.4 87 72.4
Os05g0156600 Oryza sativa ssp. japonica HOM05D000282 ORTHO05D004791 3.5e-24 114.4 87 72.4
Phvul.006G110500 Phaseolus vulgaris HOM05D000282 ORTHO05D004791 3.5e-24 114.4 87 72.4
PGR031G0774 Punica granatum HOM05D000282 ORTHO05D004791 3.5e-24 114.4 87 72.4
TWI60G1292 Tripterygium wilfordii HOM05D000282 ORTHO05D004791 3.5e-24 114.4 87 72.4
Aa31LG10G15630 Aethionema arabicum HOM05D000282 ORTHO05D004791 4.6e-24 114.0 87 71.3
Dinv32555 Davidia involucrata HOM05D000282 ORTHO05D004791 4.6e-24 114.0 93 68.8
Sp5g01760 Schrenkiella parvula HOM05D000282 ORTHO05D004791 4.6e-24 114.0 87 71.3
ATR1100G023 Amborella trichopoda HOM05D000282 ORTHO05D004791 6.0e-24 113.6 87 72.4
Cpa.g.sc194.8 Carica papaya HOM05D000282 ORTHO05D004791 6.0e-24 113.6 87 72.4
Prupe.8G052800 Prunus persica HOM05D000282 ORTHO05D004791 6.0e-24 113.6 87 72.4
SHI16878 Sapria himalayana HOM05D000282 ORTHO05D004791 6.0e-24 113.6 87 72.4
AagrBONN_evm.TU.Sc2ySwM_228.3904 Anthoceros agrestis HOM05D000282 ORTHO05D004791 7.8e-24 113.2 87 71.3
arahy.Tifrunner.gnm1.ann1.GE9U5Y Arachis hypogaea HOM05D000282 ORTHO05D004791 7.8e-24 113.2 87 71.3
arahy.Tifrunner.gnm1.ann1.HP7BC0 Arachis hypogaea HOM05D000282 ORTHO05D004791 7.8e-24 113.2 87 71.3
arahy.Tifrunner.gnm1.ann1.LPHW23 Arachis hypogaea HOM05D000282 ORTHO05D004791 7.8e-24 113.2 87 71.3
arahy.Tifrunner.gnm1.ann1.ZP6T3L Arachis hypogaea HOM05D000282 ORTHO05D004791 7.8e-24 113.2 87 71.3
Ca_09494_v3 Cicer arietinum L. HOM05D000282 ORTHO05D004791 7.8e-24 113.2 87 71.3
Glyma.03G255800 Glycine max HOM05D000282 ORTHO05D004791 7.8e-24 113.2 87 71.3
Glyma.19G253300 Glycine max HOM05D000282 ORTHO05D004791 7.8e-24 113.2 87 71.3
Lj1g0019806 Lotus japonicus HOM05D000282 ORTHO05D004791 7.8e-24 113.2 87 71.3
LjContig00049g0003003 Lotus japonicus HOM05D000282 ORTHO05D004791 7.8e-24 113.2 87 71.3
Medtr7g117050 Medicago truncatula HOM05D000282 ORTHO05D004791 7.8e-24 113.2 87 71.3
Pp3c19_7110 Physcomitrium patens HOM05D000282 ORTHO05D004791 7.8e-24 113.2 87 71.3
Pp3c22_2850 Physcomitrium patens HOM05D000282 ORTHO05D004791 7.8e-24 113.2 87 71.3
SMO118G0144 Selaginella moellendorffii HOM05D000282 ORTHO05D004791 7.8e-24 113.2 87 71.3
TPR.G4706 Trifolium pratense HOM05D000282 ORTHO05D004791 7.8e-24 113.2 87 71.3
VMungo0540G0505 Vigna mungo HOM05D000282 ORTHO05D004791 7.8e-24 113.2 87 71.3
Cc04_g10460 Coffea canephora HOM05D000282 ORTHO05D004791 1.0e-23 112.8 87 72.4
DCAR_006965 Daucus carota HOM05D000282 ORTHO05D004791 1.0e-23 112.8 87 72.4
Migut.G00954 Erythranthe guttata HOM05D000282 ORTHO05D004791 1.0e-23 112.8 87 72.4
Lj2C48T5 Lonicera japonica HOM05D000282 ORTHO05D004791 1.0e-23 112.8 87 72.4
Lj7C504T3 Lonicera japonica HOM05D000282 ORTHO05D004791 1.0e-23 112.8 87 71.3
Nitab4.5_0003282g0050 Nicotiana tabacum HOM05D000282 ORTHO05D004791 1.0e-23 112.8 96 66.7
Nitab4.5_0004750g0010 Nicotiana tabacum HOM05D000282 ORTHO05D004791 1.0e-23 112.8 96 66.7
BcaB02g07362 Brassica carinata HOM05D000282 ORTHO05D004791 1.3e-23 112.5 69 82.6
Nn1g01799 Nelumbo nucifera HOM05D000282 ORTHO05D004791 1.3e-23 112.5 87 71.3
BcaC07g40674 Brassica carinata HOM05D000282 ORTHO05D004791 1.7e-23 112.1 87 70.1
A09p53710 Brassica napus HOM05D000282 ORTHO05D004791 1.7e-23 112.1 87 70.1
C08p36490 Brassica napus HOM05D000282 ORTHO05D004791 1.7e-23 112.1 87 70.1
BolC8t51232H Brassica oleracea HOM05D000282 ORTHO05D004791 1.7e-23 112.1 87 70.1
BraA09t40793Z Brassica rapa HOM05D000282 ORTHO05D004791 1.7e-23 112.1 87 70.1
CBR_g39634 Chara braunii HOM05D000019 ORTHO05D000002 1.7e-23 112.1 87 70.1
HanXRQChr04g0120991 Helianthus annuus HOM05D000282 ORTHO05D004791 1.7e-23 112.1 87 71.3
Mapoly0046s0055 Marchantia polymorpha HOM05D000282 ORTHO05D004791 1.7e-23 112.1 87 70.1
Hund27221 Selenicereus undatus HOM05D000282 ORTHO05D004791 1.7e-23 112.1 93 66.7
ECA236G0122 Erigeron canadensis HOM05D000282 ORTHO05D004791 2.3e-23 111.7 87 70.1
vmacro22518 Vaccinium macrocarpon HOM05D000282 ORTHO05D004791 2.3e-23 111.7 87 71.3
Lj9A592T68 Lonicera japonica HOM05D000282 ORTHO05D004791 3.0e-23 111.3 91 69.2
MD07G1145100 Malus domestica HOM05D000282 ORTHO05D004791 3.9e-23 110.9 87 70.1
Nitab4.5_0002855g0020 Nicotiana tabacum HOM05D000282 ORTHO05D004791 6.6e-23 110.2 87 70.1
Nitab4.5_0002062g0030 Nicotiana tabacum HOM05D000282 ORTHO05D004791 1.5e-22 109.0 87 69.0
DCAR_016073 Daucus carota HOM05D000282 ORTHO05D013245 9.6e-22 106.3 80 73.8
Lsat_1_v5_gn_5_84941 Lactuca sativa HOM05D000282 ORTHO05D004791 3.6e-21 104.4 87 65.5
arahy.Tifrunner.gnm1.ann1.7V87L9 Arachis hypogaea HOM05D000282 ORTHO05D004791 4.7e-21 104.0 87 67.8
Psat3g003120 Pisum sativum HOM05D000282 ORTHO05D004791 8.1e-21 103.2 95 64.2
Atru.chr5.622 Acer truncatum HOM05D000282 ORTHO05D004791 3.1e-20 101.3 87 66.7
MCO13G304 Micromonas commoda HOM05D000282 ORTHO05D004791 5.2e-20 100.5 89 60.7
HanXRQChr17g0562591 Helianthus annuus HOM05D000282 ORTHO05D004791 2.0e-19 98.6 87 62.1
PRCOL_00004163 Prasinoderma coloniale HOM05D000282 ORTHO05D004791 6.4e-18 93.6 90 55.6
Cre06.g299300 Chlamydomonas reinhardtii HOM05D000282 ORTHO05D004791 2.4e-17 91.7 91 53.8
Gohir.A12G110800 Gossypium hirsutum HOM05D000282 ORTHO05D004791 1.3e-15 85.9 72 66.7
MBI19_g10806_MAGBIO Magnolia biondii HOM05D000282 ORTHO05D004791 1.3e-15 85.9 48 91.7
MBI07_g20449_MAGBIO Magnolia biondii HOM05D000282 ORTHO05D004791 6.9e-12 73.6 63 65.1
Sabra02G0144000 Salix brachista HOM05D000282 ORTHO05D004791 2.0e-11 72.0 37 97.3
BcaB02g08149 Brassica carinata HOM05D000282 ORTHO05D013245 1.7e-10 68.9 41 82.9
Cfa025047 Carpinus fangiana HOM05D000282 ORTHO05D004791 1.9e-09 65.5 85 47.1
LjContig00141g0021144 Lotus japonicus HOM05D003390 ORTHO05D004791 5.4e-09 63.9 34 88.2
MBI06_g32762_MAGBIO Magnolia biondii HOM05D000282 ORTHO05D004791 9.3e-09 63.2 50 64.0
CARHR078640 Cardamine hirsuta HOM05D000282 ORTHO05D004791 1.6e-08 62.4 37 81.1
FAN01G1869 Fragaria x ananassa HOM05D000282 ORTHO05D004791 1.6e-08 62.4 37 81.1
FAN03G1170 Fragaria x ananassa HOM05D000282 ORTHO05D004791 1.6e-08 62.4 37 81.1
HPP92_012797 Vanilla planifolia HOM05D000282 ORTHO05D004791 1.6e-08 62.4 37 81.1
unitig_8.g4945 Utricularia gibba HOM05D000282 ORTHO05D004791 2.1e-08 62.0 33 87.9
MBI01_g36440_MAGBIO Magnolia biondii HOM05D000282 ORTHO05D004791 3.0e-07 58.2 32 84.4
Lsat_1_v5_gn_2_21221 Lactuca sativa HOM05D000282 ORTHO05D013245 3.9e-07 57.8 32 90.6
Lsat_1_v5_gn_4_38081 Lactuca sativa HOM05D000282 ORTHO05D013245 3.9e-07 57.8 32 90.6
Haze_27518 Corylus avellana HOM05D000282 ORTHO05D004791 6.7e-07 57.0 86 41.9
DCAR_016076 Daucus carota HOM05D000282 ORTHO05D013245 6.7e-07 57.0 32 90.6


User provided reference genes

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