Gene: Sopen03g030510
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen03g030510
- Transcript Identifier Sopen03g030510.1
- Gene Type Coding gene
- Location Spenn-ch03 : 66182176-66189369 : negative
Gene Family Information
- ID HOM05D000282
- #Genes/#Species 1541/100
- Phylogenetic origin
- ID ORTHO05D004791
- #Genes/#Species 171/97
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Sopen03g030510.1
Descriptions
- Description Required for centrosomal and noncentrosomal microtubule nucleation. Involved in specification of cell identity, such as stomatal patterning. Constitutively expressed throughout plant. | gamma-tubulin (TUBG1) | FUNCTIONS IN: structural molecule activity, GTP binding, GTPase activity | INVOLVED IN: in 9 processes | LOCATED IN: mitochondrion, microtubule, plasma membrane, cytoplasm | EXPRESSED IN: guard cell | CONTAINS InterPro DOMAIN/s: Gamma tubulin , Tubulin , Tubulin/FtsZ, GTPase domain , Tubulin/FtsZ, N-terminal , Tubulin/FtsZ, C-terminal , Tubulin, conserved site , Tubulin/FtsZ, 2-layer sandwich domain | BEST Arabidopsis thaliana protein match is: gamma-tubulin complex protein 2
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0009553 | ISO | PLAZA Integrative Orthology | embryo sac development | AT3G61650 |
GO:0010103 | ISO | PLAZA Integrative Orthology | stomatal complex morphogenesis | AT3G61650 |
GO:0048366 | ISO | PLAZA Integrative Orthology | leaf development | AT3G61650 |
GO:0051641 | ISO | PLAZA Integrative Orthology | cellular localization | AT3G61650 |
GO:0009624 | ISO | PLAZA Integrative Orthology | response to nematode | AT3G61650 |
GO:0048768 | ISO | PLAZA Integrative Orthology | root hair cell tip growth | AT3G61650 |
GO:0000911 | ISO | PLAZA Integrative Orthology | cytokinesis by cell plate formation | AT3G61650 |
GO:0000914 | ISO | PLAZA Integrative Orthology | phragmoplast assembly | AT3G61650 |
GO:0031122 | IEA | InterPro | cytoplasmic microtubule organization | |
GO:0007020 | IEA | InterPro | microtubule nucleation | |
GO:0007017 | IEA | InterPro | microtubule-based process |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005200 | ISO | PLAZA Homology (enrichment) | structural constituent of cytoskeleton | HOM05D000282 |
GO:0005525 | IEA | InterPro | GTP binding | |
GO:0003924 | IEA | InterPro | GTPase activity |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005618 | ISO | PLAZA Integrative Orthology | cell wall | AT5G05620 |
GO:0005739 | ISO | PLAZA Integrative Orthology | mitochondrion | AT3G61650 |
GO:0005938 | ISO | PLAZA Integrative Orthology | cell cortex | AT3G61650 |
GO:0005737 | ISO | PLAZA Integrative Orthology | cytoplasm | AT3G61650 |
GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT3G61650 |
GO:0005635 | ISO | PLAZA Integrative Orthology | nuclear envelope | AT5G05620 |
GO:0005886 | ISO | PLAZA Integrative Orthology | plasma membrane | AT3G61650 |
GO:0005874 | IEA | InterPro | microtubule | |
GO:0000930 | IEA | InterPro | gamma-tubulin complex |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
InterPro | Description |
---|---|
IPR037103 | Tubulin/FtsZ-like, C-terminal domain |
IPR036525 | Tubulin/FtsZ, GTPase domain superfamily |
IPR000217 | Tubulin |
IPR003008 | Tubulin/FtsZ, GTPase domain |
IPR023123 | Tubulin, C-terminal |
IPR002454 | Gamma tubulin |
IPR018316 | Tubulin/FtsZ, 2-layer sandwich domain |
IPR008280 | Tubulin/FtsZ, C-terminal |
Mapman id | Description |
---|---|
20.1.2.1.1 | Cytoskeleton organisation.microtubular network.microtubule Tubulin heterodimer formation.gamma-Tubulin Ring Complex (gamma-TuRC).gamma tubulin component TUG1 |