Gene: Sopen03g030510

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen03g030510
  • Transcript Identifier Sopen03g030510.1
  • Gene Type Coding gene
  • Location Spenn-ch03 : 66182176-66189369 : negative

Gene Family Information

  • ID HOM05D000282
  • #Genes/#Species 1541/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen03g030510.1

Descriptions

  • Description Required for centrosomal and noncentrosomal microtubule nucleation. Involved in specification of cell identity, such as stomatal patterning. Constitutively expressed throughout plant. | gamma-tubulin (TUBG1) | FUNCTIONS IN: structural molecule activity, GTP binding, GTPase activity | INVOLVED IN: in 9 processes | LOCATED IN: mitochondrion, microtubule, plasma membrane, cytoplasm | EXPRESSED IN: guard cell | CONTAINS InterPro DOMAIN/s: Gamma tubulin , Tubulin , Tubulin/FtsZ, GTPase domain , Tubulin/FtsZ, N-terminal , Tubulin/FtsZ, C-terminal , Tubulin, conserved site , Tubulin/FtsZ, 2-layer sandwich domain | BEST Arabidopsis thaliana protein match is: gamma-tubulin complex protein 2
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009553
ISO
PLAZA Integrative Orthologyembryo sac development AT3G61650
GO:0010103
ISO
PLAZA Integrative Orthologystomatal complex morphogenesis AT3G61650
GO:0048366
ISO
PLAZA Integrative Orthologyleaf development AT3G61650
GO:0051641
ISO
PLAZA Integrative Orthologycellular localization AT3G61650
GO:0009624
ISO
PLAZA Integrative Orthologyresponse to nematode AT3G61650
GO:0048768
ISO
PLAZA Integrative Orthologyroot hair cell tip growth AT3G61650
GO:0000911
ISO
PLAZA Integrative Orthologycytokinesis by cell plate formation AT3G61650
GO:0000914
ISO
PLAZA Integrative Orthologyphragmoplast assembly AT3G61650
GO:0031122
IEA
InterProcytoplasmic microtubule organization
GO:0007020
IEA
InterPromicrotubule nucleation
GO:0007017
IEA
InterPromicrotubule-based process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005200
ISO
PLAZA Homology (enrichment)structural constituent of cytoskeleton HOM05D000282
GO:0005525
IEA
InterProGTP binding
GO:0003924
IEA
InterProGTPase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005618
ISO
PLAZA Integrative Orthologycell wall AT5G05620
GO:0005739
ISO
PLAZA Integrative Orthologymitochondrion AT3G61650
GO:0005938
ISO
PLAZA Integrative Orthologycell cortex AT3G61650
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT3G61650
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT3G61650
GO:0005635
ISO
PLAZA Integrative Orthologynuclear envelope AT5G05620
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT3G61650
GO:0005874
IEA
InterPromicrotubule
GO:0000930
IEA
InterProgamma-tubulin complex

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR037103 Tubulin/FtsZ-like, C-terminal domain
IPR036525 Tubulin/FtsZ, GTPase domain superfamily
IPR000217 Tubulin
IPR003008 Tubulin/FtsZ, GTPase domain
IPR023123 Tubulin, C-terminal
IPR002454 Gamma tubulin
IPR018316 Tubulin/FtsZ, 2-layer sandwich domain
IPR008280 Tubulin/FtsZ, C-terminal
Mapman id Description
20.1.2.1.1 Cytoskeleton organisation.microtubular network.microtubule Tubulin heterodimer formation.gamma-Tubulin Ring Complex (gamma-TuRC).gamma tubulin component TUG1