Gene: Solyc03g111380.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc03g111380.3
  • Transcript Identifier Solyc03g111380.3.1
  • Gene Type Coding gene
  • Location SL4.0ch03 : 56376692-56383889 : negative

Gene Family Information

  • ID HOM05D000282
  • #Genes/#Species 1541/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc03g111380.3.1
  • uniprot A0A3Q7FPF2
  • gene_id Solyc03g111380

Descriptions

  • Description Tubulin gamma chain (AHRD V3.3 *** Q1HMQ7_TOBAC)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009553
ISO
PLAZA Integrative Orthologyembryo sac development AT3G61650
GO:0000070
IBA
GOA Databasemitotic sister chromatid segregation
GO:0000212
IBA
GOA Databasemeiotic spindle organization
GO:0000226
IBA
GOA Databasemicrotubule cytoskeleton organization
GO:0000278
IBA
GOA Databasemitotic cell cycle
GO:0000914
ISO
PLAZA Integrative Orthologyphragmoplast assembly AT3G61650
GO:0000911
ISO
PLAZA Integrative Orthologycytokinesis by cell plate formation AT3G61650
GO:0048768
ISO
PLAZA Integrative Orthologyroot hair cell tip growth AT3G61650
GO:0009624
ISO
PLAZA Integrative Orthologyresponse to nematode AT3G61650
GO:0051641
ISO
PLAZA Integrative Orthologycellular localization AT3G61650
GO:0048366
ISO
PLAZA Integrative Orthologyleaf development AT3G61650
GO:0010103
ISO
PLAZA Integrative Orthologystomatal complex morphogenesis AT3G61650
GO:0007017
IEA
GOA Databasemicrotubule-based process
GO:0007017
IEA
InterPromicrotubule-based process
GO:0007020
IBA
IEA
GOA Databasemicrotubule nucleation
GO:0007020
IEA
InterPromicrotubule nucleation
GO:0031122
IEA
GOA Databasecytoplasmic microtubule organization
GO:0031122
IEA
InterProcytoplasmic microtubule organization
GO:0007052
IBA
GOA Databasemitotic spindle organization

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005525
IBA
IEA
GOA DatabaseGTP binding
GO:0005525
IEA
InterProGTP binding
GO:0005200
IBA
GOA Databasestructural constituent of cytoskeleton
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0003924
IEA
GOA DatabaseGTPase activity
GO:0003924
IEA
InterProGTPase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005819
IBA
GOA Databasespindle
GO:0005634
IBA
GOA Databasenucleus
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT3G61650
GO:0005635
ISO
PLAZA Integrative Orthologynuclear envelope AT5G05620
GO:0005938
ISO
PLAZA Integrative Orthologycell cortex AT3G61650
GO:0005739
ISO
PLAZA Integrative Orthologymitochondrion AT3G61650
GO:0005618
ISO
PLAZA Integrative Orthologycell wall AT5G05620
GO:0000930
IBA
IEA
GOA Databasegamma-tubulin complex
GO:0000930
IEA
InterProgamma-tubulin complex
GO:0005856
IEA
GOA Databasecytoskeleton
GO:0005874
IBA
IEA
GOA Databasemicrotubule
GO:0005874
IEA
InterPromicrotubule
GO:0005737
IBA
GOA Databasecytoplasm

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR037103 Tubulin/FtsZ-like, C-terminal domain
IPR036525 Tubulin/FtsZ, GTPase domain superfamily
IPR000217 Tubulin
IPR003008 Tubulin/FtsZ, GTPase domain
IPR023123 Tubulin, C-terminal
IPR002454 Gamma tubulin
IPR018316 Tubulin/FtsZ, 2-layer sandwich domain
IPR008280 Tubulin/FtsZ, C-terminal
Mapman id Description
20.1.2.1.1 Cytoskeleton organisation.microtubular network.microtubule Tubulin heterodimer formation.gamma-Tubulin Ring Complex (gamma-TuRC).gamma tubulin component TUG1