Gene: Sc01g0002960
General Information
Structural Information
- Species Simmondsia chinensis
- Gene Identifier Sc01g0002960
- Transcript Identifier Sc01g0002960.01
- Gene Type Coding gene
- Location GWHAASQ00000001 : 4546129-4554985 : positive
Gene Family Information
- ID HOM05D000282
- #Genes/#Species 1541/100
- Phylogenetic origin
- ID ORTHO05D004791
- #Genes/#Species 171/97
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Sc01g0002960.01
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009553 | ISO | PLAZA Integrative Orthology | embryo sac development | AT3G61650 |
| GO:0010103 | ISO | PLAZA Integrative Orthology | stomatal complex morphogenesis | AT3G61650 |
| GO:0048366 | ISO | PLAZA Integrative Orthology | leaf development | AT3G61650 |
| GO:0051641 | ISO | PLAZA Integrative Orthology | cellular localization | AT3G61650 |
| GO:0009624 | ISO | PLAZA Integrative Orthology | response to nematode | AT3G61650 |
| GO:0048768 | ISO | PLAZA Integrative Orthology | root hair cell tip growth | AT3G61650 |
| GO:0000911 | ISO | PLAZA Integrative Orthology | cytokinesis by cell plate formation | AT3G61650 |
| GO:0000914 | ISO | PLAZA Integrative Orthology | phragmoplast assembly | AT3G61650 |
| GO:0031122 | IEA | InterPro | cytoplasmic microtubule organization | |
| GO:0007020 | IEA | InterPro | microtubule nucleation | |
| GO:0007017 | IEA | InterPro | microtubule-based process |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005200 | ISO | PLAZA Homology (enrichment) | structural constituent of cytoskeleton | HOM05D000282 |
| GO:0005525 | IEA | InterPro | GTP binding | |
| GO:0003924 | IEA | InterPro | GTPase activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005618 | ISO | PLAZA Integrative Orthology | cell wall | AT5G05620 |
| GO:0005739 | ISO | PLAZA Integrative Orthology | mitochondrion | AT3G61650 |
| GO:0005938 | ISO | PLAZA Integrative Orthology | cell cortex | AT3G61650 |
| GO:0005737 | ISO | PLAZA Integrative Orthology | cytoplasm | AT3G61650 |
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT3G61650 |
| GO:0005635 | ISO | PLAZA Integrative Orthology | nuclear envelope | AT5G05620 |
| GO:0005886 | ISO | PLAZA Integrative Orthology | plasma membrane | AT3G61650 |
| GO:0005874 | IEA | InterPro | microtubule | |
| GO:0000930 | IEA | InterPro | gamma-tubulin complex |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR000217 | Tubulin |
| IPR037103 | Tubulin/FtsZ-like, C-terminal domain |
| IPR018316 | Tubulin/FtsZ, 2-layer sandwich domain |
| IPR036525 | Tubulin/FtsZ, GTPase domain superfamily |
| IPR003008 | Tubulin/FtsZ, GTPase domain |
| IPR002454 | Gamma tubulin |
| IPR008280 | Tubulin/FtsZ, C-terminal |
| IPR023123 | Tubulin, C-terminal |
| Mapman id | Description |
|---|---|
| 20.1.2.1.1 | Cytoskeleton organisation.microtubular network.microtubule Tubulin heterodimer formation.gamma-Tubulin Ring Complex (gamma-TuRC).gamma tubulin component TUG1 |