Gene: AT5G05620

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G05620
  • Transcript Identifier AT5G05620.1
  • Gene Type Coding gene
  • Location Chr5 : 1679340-1681719 : positive

Gene Family Information

  • ID HOM05D000282
  • #Genes/#Species 1541/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G05620.1
  • symbol GCP2
  • Alias ATGCP2,ARABIDOPSIS THALIANA GAMMA-TUBULIN COMPLEX PROTEIN 2,TUBG2,GAMMA-TUBULIN 2
  • full_name gamma-tubulin complex protein 2
  • uniprot P38558

Descriptions

  • Description gamma-tubulin complex protein 2
  • Computational description gamma-tubulin complex protein 2 (GCP2); FUNCTIONS IN: structural molecule activity, GTP binding, GTPase activity; INVOLVED IN: in 9 processes; LOCATED IN: in 6 components; CONTAINS InterPro DOMAIN/s: Gamma tubulin (InterPro:IPR002454), Tubulin (InterPro:IPR000217), Tubulin/FtsZ, GTPase domain (InterPro:IPR003008), Tubulin/FtsZ, N-terminal (InterPro:IPR019746), Tubulin/FtsZ, C-terminal (InterPro:IPR008280), Tubulin, conserved site (InterPro:IPR017975), Tubulin/FtsZ, 2-layer sandwich domain (InterPro:IPR018316); BEST Arabidopsis thaliana protein match is: gamma-tubulin (TAIR:AT3G61650.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000278
IBA
Gene Ontologymitotic cell cycle1
GO:0007020
IEA
GOA Databasemicrotubule nucleation
GO:0007020
IBA
Gene Ontologymicrotubule nucleation1
GO:0007020
IEA
InterPromicrotubule nucleation
GO:0000226
IBA
Gene Ontologymicrotubule cytoskeleton organization1
GO:0007017
IEA
GOA Databasemicrotubule-based process
GO:0007017
IEA
InterPromicrotubule-based process
GO:0031122
IEA
Gene Ontologycytoplasmic microtubule organization
GO:0031122
IEA
InterProcytoplasmic microtubule organization
GO:0009553
IGI
Gene Ontologyembryo sac development2
GO:0000911
IMP
Gene Ontologycytokinesis by cell plate formation3
GO:0010103
IMP
Gene Ontologystomatal complex morphogenesis3
GO:0048366
IMP
Gene Ontologyleaf development3
GO:0048768
IMP
Gene Ontologyroot hair cell tip growth3
GO:0051641
IMP
Gene Ontologycellular localization3
GO:0000914
IGI
Gene Ontologyphragmoplast assembly2
GO:0009624
IDA
Gene Ontologyresponse to nematode4
GO:0007052
IBA
Gene Ontologymitotic spindle organization1
GO:0000070
IBA
Gene Ontologymitotic sister chromatid segregation1
GO:0000212
IBA
Gene Ontologymeiotic spindle organization1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005525
IEA
GOA DatabaseGTP binding
GO:0005525
IBA
Gene OntologyGTP binding1
GO:0005525
IEA
InterProGTP binding
GO:0005200
IBA
Gene Ontologystructural constituent of cytoskeleton1
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0003924
IEA
Gene OntologyGTPase activity
GO:0003924
IEA
InterProGTPase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005874
IEA
GOA Databasemicrotubule
GO:0005874
IDA
IBA
Gene Ontologymicrotubule1 3
GO:0005874
IEA
InterPromicrotubule
GO:0005737
IDA
IEA
GOA Databasecytoplasm
GO:0005737
HDA
IBA
Gene Ontologycytoplasm1 5
GO:0005856
IEA
GOA Databasecytoskeleton
GO:0005938
IEA
GOA Databasecell cortex
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
IBA
Gene Ontologynucleus1
GO:0005618
IDA
GOA Databasecell wall
GO:0005618
HDA
Gene Ontologycell wall5
GO:0005739
IDA
GOA Databasemitochondrion
GO:0005739
HDA
ISM
Gene Ontologymitochondrion6
GO:0000930
IEA
GOA Databasegamma-tubulin complex
GO:0000930
IBA
Gene Ontologygamma-tubulin complex1
GO:0000930
IEA
InterProgamma-tubulin complex
GO:0005635
IDA
Gene Ontologynuclear envelope7
GO:0005886
IDA
Gene Ontologyplasma membrane7
GO:0005829
RCA
Gene Ontologycytosol8
GO:0005813
IBA
Gene Ontologycentrosome1
GO:0005819
IBA
Gene Ontologyspindle1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR003008 Tubulin/FtsZ, GTPase domain
IPR037103 Tubulin/FtsZ-like, C-terminal domain
IPR000217 Tubulin
IPR018316 Tubulin/FtsZ, 2-layer sandwich domain
IPR002454 Gamma tubulin
IPR023123 Tubulin, C-terminal
IPR036525 Tubulin/FtsZ, GTPase domain superfamily
IPR008280 Tubulin/FtsZ, C-terminal
Mapman id Description
20.1.2.1.1 Cytoskeleton organisation.microtubular network.microtubule Tubulin heterodimer formation.gamma-Tubulin Ring Complex (gamma-TuRC).gamma tubulin component TUG1