Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL09p018667 Quercus lobata HOM05D001366 ORTHO05D005449 6.7e-35 150.2 80 100.0
TAR625G0060 Trochodendron aralioides HOM05D001366 ORTHO05D005449 1.5e-23 112.5 60 98.3
Sed0016266 Sechium edule HOM05D001366 ORTHO05D005449 2.0e-23 112.1 60 98.3
BcaNung05637 Brassica carinata HOM05D001366 ORTHO05D005449 4.5e-23 110.9 60 96.7
A03p55290 Brassica napus HOM05D001366 ORTHO05D005449 4.5e-23 110.9 60 96.7
C07p53590 Brassica napus HOM05D001366 ORTHO05D005449 4.5e-23 110.9 60 96.7
BraA03t14588Z Brassica rapa HOM05D001366 ORTHO05D005449 4.5e-23 110.9 60 96.7
ClCG11G014700 Citrullus lanatus HOM05D001366 ORTHO05D005449 4.5e-23 110.9 60 96.7
Gohir.A05G216500 Gossypium hirsutum HOM05D001366 ORTHO05D005449 4.5e-23 110.9 73 83.6
Sed0015347 Sechium edule HOM05D001366 ORTHO05D005449 4.5e-23 110.9 60 96.7
GSVIVG01009213001 Vitis vinifera HOM05D001366 ORTHO05D005449 4.5e-23 110.9 60 96.7
CsaV3_2G033370 Cucumis sativus L. HOM05D001366 ORTHO05D005449 5.9e-23 110.5 60 95.0
Manes.18G057000 Manihot esculenta HOM05D001366 ORTHO05D005449 5.9e-23 110.5 60 96.7
ATR0691G175 Amborella trichopoda HOM05D001366 ORTHO05D005449 7.7e-23 110.2 60 95.0
Eucgr.F00436 Eucalyptus grandis HOM05D001366 ORTHO05D005449 7.7e-23 110.2 60 95.0
MBI19_g32700_MAGBIO Magnolia biondii HOM05D001366 ORTHO05D005449 7.7e-23 110.2 60 95.0
Aqoxy6G00666 Aquilegia oxysepala HOM05D001366 ORTHO05D005449 1.0e-22 109.8 60 93.3
CANSAT25G2801 Cannabis sativa HOM05D001366 ORTHO05D005449 1.0e-22 109.8 60 95.0
Ca_08744_v3 Cicer arietinum L. HOM05D001366 ORTHO05D005449 1.0e-22 109.8 62 91.9
COL.COLO4_35286 Corchorus olitorius HOM05D001366 ORTHO05D005449 1.0e-22 109.8 60 95.0
MELO3C008106.2 Cucumis melo HOM05D001366 ORTHO05D005449 1.0e-22 109.8 60 95.0
Os05g0107700 Oryza sativa ssp. japonica HOM05D001366 ORTHO05D005449 1.0e-22 109.8 60 95.0
PSO013G0324 Papaver somniferum HOM05D001366 ORTHO05D005449 1.0e-22 109.8 60 93.3
PSO700G0345 Papaver somniferum HOM05D001366 ORTHO05D005449 1.0e-22 109.8 60 93.3
PSO761G0276 Papaver somniferum HOM05D001366 ORTHO05D005449 1.0e-22 109.8 60 93.3
Aa31LG4G9540 Aethionema arabicum HOM05D001366 ORTHO05D005449 1.3e-22 109.4 60 95.0
AL7G28780 Arabidopsis lyrata HOM05D001366 ORTHO05D005449 1.3e-22 109.4 60 95.0
AT4G24440 Arabidopsis thaliana HOM05D001366 ORTHO05D005449 1.3e-22 109.4 60 95.0
BcaC06g32884 Brassica carinata HOM05D001366 ORTHO05D005449 1.3e-22 109.4 60 95.0
BcaC09g50868 Brassica carinata HOM05D001366 ORTHO05D003220 1.3e-22 109.4 60 95.0
A01p15810 Brassica napus HOM05D001366 ORTHO05D003220 1.3e-22 109.4 60 95.0
A08p21460 Brassica napus HOM05D001366 ORTHO05D005449 1.3e-22 109.4 60 95.0
C01p19760 Brassica napus HOM05D001366 ORTHO05D003220 1.3e-22 109.4 60 95.0
BolC1t01904H Brassica oleracea HOM05D001366 ORTHO05D003220 1.3e-22 109.4 60 95.0
BolC7t45851H Brassica oleracea HOM05D001366 ORTHO05D005449 1.3e-22 109.4 60 95.0
BolC8t48576H Brassica oleracea HOM05D001366 ORTHO05D005449 1.3e-22 109.4 60 95.0
BraA01t01516Z Brassica rapa HOM05D001366 ORTHO05D003220 1.3e-22 109.4 60 95.0
BraA08t34095Z Brassica rapa HOM05D001366 ORTHO05D005449 1.3e-22 109.4 60 95.0
Carub.0007s1663 Capsella rubella HOM05D001366 ORTHO05D005449 1.3e-22 109.4 60 95.0
CiPaw.07G162800 Carya illinoinensis HOM05D001366 ORTHO05D005449 1.3e-22 109.4 60 95.0
Thhalv10026637m.g Eutrema salsugineum HOM05D001366 ORTHO05D005449 1.3e-22 109.4 60 95.0
Gohir.D05G220900 Gossypium hirsutum HOM05D001366 ORTHO05D005449 1.3e-22 109.4 60 95.0
Gorai.009G228000 Gossypium raimondii HOM05D001366 ORTHO05D005449 1.3e-22 109.4 60 95.0
PSO832G3977 Papaver somniferum HOM05D001366 ORTHO05D005449 1.3e-22 109.4 60 91.7
Rhsim02G0071900 Rhododendron simsii HOM05D001366 ORTHO05D005449 1.3e-22 109.4 60 93.3
Sp7g22400 Schrenkiella parvula HOM05D001366 ORTHO05D005449 1.3e-22 109.4 60 95.0
Thecc.08G074000 Theobroma cacao HOM05D001366 ORTHO05D005449 1.3e-22 109.4 60 95.0
EL10Ac9g20840 Beta vulgaris HOM05D001366 ORTHO05D005449 2.2e-22 108.6 60 93.3
CsaV3_2G033350 Cucumis sativus L. HOM05D001366 ORTHO05D005449 2.2e-22 108.6 60 95.0
Gorai.009G278800 Gossypium raimondii HOM05D001366 ORTHO05D005449 2.2e-22 108.6 60 95.0
Zm00001eb356100 Zea mays HOM05D001366 ORTHO05D005449 2.2e-22 108.6 60 91.7
Aqoxy2G03242 Aquilegia oxysepala HOM05D001366 ORTHO05D005449 2.9e-22 108.2 60 91.7
Cpa.g.sc21.43 Carica papaya HOM05D001366 ORTHO05D005449 2.9e-22 108.2 60 93.3
ECA246G1742 Erigeron canadensis HOM05D001366 ORTHO05D005449 2.9e-22 108.2 60 93.3
FvH4_5g34180 Fragaria vesca HOM05D001366 ORTHO05D005449 2.9e-22 108.2 60 93.3
FAN04G2369 Fragaria x ananassa HOM05D001366 ORTHO05D005449 2.9e-22 108.2 60 93.3
FAN18G2982 Fragaria x ananassa HOM05D001366 ORTHO05D005449 2.9e-22 108.2 60 93.3
Glyma.02G216100 Glycine max HOM05D001366 ORTHO05D005449 2.9e-22 108.2 60 93.3
Glyma.14G183100 Glycine max HOM05D001366 ORTHO05D005449 2.9e-22 108.2 60 93.3
Lsat_1_v5_gn_6_107360 Lactuca sativa HOM05D001366 ORTHO05D005449 2.9e-22 108.2 60 93.3
LjContig00408g0006754 Lotus japonicus HOM05D001366 ORTHO05D005449 2.9e-22 108.2 60 93.3
Phvul.008G183300 Phaseolus vulgaris HOM05D001366 ORTHO05D005449 2.9e-22 108.2 60 93.3
Prupe.1G536300 Prunus persica HOM05D001366 ORTHO05D005449 2.9e-22 108.2 60 93.3
RcHm_v2.0_Chr7g0233761 Rosa chinensis HOM05D001366 ORTHO05D005449 2.9e-22 108.2 60 93.3
TWI09G0135 Tripterygium wilfordii HOM05D001366 ORTHO05D005449 2.9e-22 108.2 60 93.3
VMungo0647G1399 Vigna mungo HOM05D001366 ORTHO05D005449 2.9e-22 108.2 60 93.3
DCAR_006444 Daucus carota HOM05D001366 ORTHO05D005449 3.8e-22 107.8 60 93.3
HanXRQChr10g0277741 Helianthus annuus HOM05D001366 ORTHO05D005449 3.8e-22 107.8 60 93.3
Hma1.2p1_0125F.1_g058680 Hydrangea macrophylla HOM05D001366 ORTHO05D005449 3.8e-22 107.8 60 93.3
Nn1g05642 Nelumbo nucifera HOM05D001366 ORTHO05D005449 3.8e-22 107.8 60 91.7
Nitab4.5_0000354g0080 Nicotiana tabacum HOM05D001366 ORTHO05D005449 3.8e-22 107.8 60 93.3
Nitab4.5_0000885g0060 Nicotiana tabacum HOM05D001366 ORTHO05D005449 3.8e-22 107.8 60 93.3
Psat2g064960 Pisum sativum HOM05D001366 ORTHO05D005449 3.8e-22 107.8 60 93.3
Rhsim07G0213700 Rhododendron simsii HOM05D001366 ORTHO05D005449 3.8e-22 107.8 60 91.7
vmacro04625 Vaccinium macrocarpon HOM05D001366 ORTHO05D005449 3.8e-22 107.8 60 91.7
Atru.chr13.973 Acer truncatum HOM05D001366 ORTHO05D005449 5.0e-22 107.5 60 91.7
EL10Ac8g20405 Beta vulgaris HOM05D001366 ORTHO05D005449 5.0e-22 107.5 60 91.7
Cc10_g08370 Coffea canephora HOM05D001366 ORTHO05D005449 5.0e-22 107.5 60 93.3
Dinv42590 Davidia involucrata HOM05D001366 ORTHO05D005449 5.0e-22 107.5 60 93.3
Lalb_Chr08g0242611 Lupinus albus HOM05D001366 ORTHO05D005449 5.0e-22 107.5 60 93.3
Medtr7g005540 Medicago truncatula HOM05D001366 ORTHO05D005449 5.0e-22 107.5 60 91.7
Hund07854 Selenicereus undatus HOM05D001366 ORTHO05D005449 5.0e-22 107.5 60 93.3
THA.LOC104815469 Tarenaya hassleriana HOM05D001366 ORTHO05D005449 5.0e-22 107.5 60 93.3
HPP92_010288 Vanilla planifolia HOM05D001366 ORTHO05D005449 5.0e-22 107.5 60 91.7
CSS0031876 Camellia sinensis var. sinensis HOM05D001366 ORTHO05D005449 6.5e-22 107.1 60 91.7
CARHR231830 Cardamine hirsuta HOM05D001366 ORTHO05D005449 6.5e-22 107.1 60 91.7
Ciclev10002917m.g Citrus clementina HOM05D001366 ORTHO05D005449 6.5e-22 107.1 60 91.7
PGR042G3224 Punica granatum HOM05D001366 ORTHO05D005449 6.5e-22 107.1 60 91.7
Actinidia29656 Actinidia chinensis HOM05D001366 ORTHO05D005449 8.5e-22 106.7 60 91.7
Gohir.A05G264200 Gossypium hirsutum HOM05D001366 ORTHO05D005449 8.5e-22 106.7 60 93.3
Oeu038169.3 Olea europaea HOM05D001366 ORTHO05D005449 8.5e-22 106.7 62 90.3
THA.LOC104799853 Tarenaya hassleriana HOM05D001366 ORTHO05D005449 8.5e-22 106.7 60 91.7
TWI73G1055 Tripterygium wilfordii HOM05D001366 ORTHO05D005449 8.5e-22 106.7 60 91.7
arahy.Tifrunner.gnm1.ann1.8785AP Arachis hypogaea HOM05D001366 ORTHO05D005449 1.1e-21 106.3 60 91.7
arahy.Tifrunner.gnm1.ann1.CRNC3Y Arachis hypogaea HOM05D001366 ORTHO05D005449 1.1e-21 106.3 60 91.7
arahy.Tifrunner.gnm1.ann1.HU70H8 Arachis hypogaea HOM05D001366 ORTHO05D005449 1.1e-21 106.3 60 91.7
arahy.Tifrunner.gnm1.ann1.T41BVH Arachis hypogaea HOM05D001366 ORTHO05D005449 1.1e-21 106.3 60 91.7
Gohir.D05G266700 Gossypium hirsutum HOM05D001366 ORTHO05D005449 1.1e-21 106.3 60 93.3
Lalb_Chr11g0064851 Lupinus albus HOM05D001366 ORTHO05D005449 1.1e-21 106.3 60 91.7
Lalb_Chr23g0269931 Lupinus albus HOM05D001366 ORTHO05D005449 1.1e-21 106.3 60 91.7
Oeu040884.1 Olea europaea HOM05D001366 ORTHO05D005449 1.1e-21 106.3 60 91.7
PGSC0003DMG400002052 Solanum tuberosum HOM05D001366 ORTHO05D005449 1.1e-21 106.3 60 93.3
CSS0026904 Camellia sinensis var. sinensis HOM05D001366 ORTHO05D005449 1.4e-21 105.9 60 91.7
Duzib041G0019 Durio zibethinus HOM05D001366 ORTHO05D005449 1.4e-21 105.9 59 93.2
Sabra05G0119200 Salix brachista HOM05D001366 ORTHO05D005449 1.4e-21 105.9 61 88.5
TPR.G15622 Trifolium pratense HOM05D001366 ORTHO05D005449 1.9e-21 105.5 60 91.7
CAN.G1104.8 Capsicum annuum HOM05D001366 ORTHO05D005449 2.5e-21 105.1 60 91.7
Haze_22489 Corylus avellana HOM05D001366 ORTHO05D005449 2.5e-21 105.1 60 90.0
Peaxi162Scf00160g00913 Petunia axillaris HOM05D001366 ORTHO05D005449 2.5e-21 105.1 60 90.0
Solyc12g088030.2 Solanum lycopersicum HOM05D001366 ORTHO05D005449 2.5e-21 105.1 60 91.7
Sopen12g030060 Solanum pennellii HOM05D001366 ORTHO05D005449 2.5e-21 105.1 60 91.7
SGA_v2.0_scaffold219G42523 Striga asiatica HOM05D001366 ORTHO05D005449 2.5e-21 105.1 60 88.3
SGA_v2.0_scaffold337G49194 Striga asiatica HOM05D001366 ORTHO05D005449 2.5e-21 105.1 60 88.3
Atru.chr11.619 Acer truncatum HOM05D001366 ORTHO05D005449 3.2e-21 104.8 60 88.3
Ah.01g003970 Amaranthus hybridus HOM05D001366 ORTHO05D005449 3.2e-21 104.8 60 90.0
MSTRG.5323 Avicennia marina HOM05D001366 ORTHO05D005449 4.2e-21 104.4 60 85.0
CiPaw.08G057200 Carya illinoinensis HOM05D001366 ORTHO05D005449 4.2e-21 104.4 60 90.0
Os01g0970500 Oryza sativa ssp. japonica HOM05D001366 ORTHO05D005449 5.5e-21 104.0 60 88.3
Potri.005G151700 Populus trichocarpa HOM05D001366 ORTHO05D005449 5.5e-21 104.0 60 88.3
MSTRG.27758 Avicennia marina HOM05D001366 ORTHO05D005449 7.2e-21 103.6 60 85.0
SalBow6G3832 Salvia bowleyana HOM05D001366 ORTHO05D005449 7.2e-21 103.6 60 86.7
SalBow6G5818 Salvia bowleyana HOM05D001366 ORTHO05D005449 7.2e-21 103.6 60 86.7
MSTRG.16686 Avicennia marina HOM05D001366 ORTHO05D005449 9.4e-21 103.2 60 85.0
ECA240G3991 Erigeron canadensis HOM05D001366 ORTHO05D005449 9.4e-21 103.2 60 88.3
Migut.N01147 Erythranthe guttata HOM05D001366 ORTHO05D005449 9.4e-21 103.2 60 86.7
SalBow3G1925 Salvia bowleyana HOM05D001366 ORTHO05D005449 9.4e-21 103.2 60 86.7
Zm00001eb139900 Zea mays HOM05D001366 ORTHO05D005449 2.1e-20 102.1 60 86.7
HanXRQChr03g0063191 Helianthus annuus HOM05D001366 ORTHO05D005449 2.7e-20 101.7 60 86.7
Lsat_1_v5_gn_7_43741 Lactuca sativa HOM05D001366 ORTHO05D005449 2.7e-20 101.7 60 86.7
unitig_22.g6842 Utricularia gibba HOM05D001366 ORTHO05D005449 1.0e-19 99.8 60 81.7
TWI56G0439 Tripterygium wilfordii HOM05D001366 ORTHO05D005449 3.0e-19 98.2 60 83.3
TPR.G38776 Trifolium pratense HOM05D001366 ORTHO05D005449 3.9e-19 97.8 60 83.3
Lsat_1_v5_gn_4_60280 Lactuca sativa HOM05D001366 ORTHO05D005449 5.1e-19 97.4 60 83.3
Medtr5g066740 Medicago truncatula HOM05D001366 ORTHO05D005449 7.4e-18 93.6 60 75.0
Psat0s2399g0160 Pisum sativum HOM05D001366 ORTHO05D005449 3.7e-17 91.3 60 73.3
AUR62014838 Chenopodium quinoa HOM05D001366 ORTHO05D005449 2.0e-15 85.5 57 77.2
AUR62017035 Chenopodium quinoa HOM05D001366 ORTHO05D005449 2.0e-15 85.5 47 95.7
SHI29728 Sapria himalayana HOM05D001366 ORTHO05D005449 2.6e-15 85.1 60 80.0
HanXRQChr05g0143271 Helianthus annuus HOM05D001366 ORTHO05D005449 3.5e-15 84.7 51 82.4
Actinidia19254 Actinidia chinensis HOM05D001366 ORTHO05D005449 4.5e-15 84.3 60 68.3
Migut.B00439 Erythranthe guttata HOM05D001366 ORTHO05D005449 1.3e-14 82.8 60 70.0
MD08G1203900 Malus domestica HOM05D001366 ORTHO05D005449 1.3e-14 82.8 47 91.5
Duzib116G0949 Durio zibethinus HOM05D001366 ORTHO05D005449 2.2e-14 82.0 43 93.0
TAR381G0322 Trochodendron aralioides HOM05D001366 ORTHO05D005449 1.9e-13 79.0 60 68.3
Mapoly0012s0108 Marchantia polymorpha HOM05D001366 ORTHO05D005449 2.5e-13 78.6 60 61.7
Pp3c15_13540 Physcomitrium patens HOM05D001366 ORTHO05D005449 2.1e-12 75.5 60 58.3
AagrBONN_evm.TU.Sc2ySwM_228.5579 Anthoceros agrestis HOM05D001366 ORTHO05D005449 4.7e-12 74.3 60 56.7
Pp3c9_10830 Physcomitrium patens HOM05D001366 ORTHO05D005449 4.7e-12 74.3 60 58.3
Lsat_1_v5_gn_8_150280 Lactuca sativa HOM05D001675 ORTHO05D004161 6.1e-12 73.9 50 76.0
SMO169G0007 Selaginella moellendorffii HOM05D001366 ORTHO05D005449 6.1e-12 73.9 60 60.0
AagrBONN_evm.TU.Sc2ySwM_228.3950 Anthoceros agrestis HOM05D001366 ORTHO05D005449 3.3e-10 68.2 60 53.3
RcHm_v2.0_Chr5g0012851 Rosa chinensis HOM05D001366 ORTHO05D005449 3.3e-10 68.2 60 61.7
unitig_8.g3420 Utricularia gibba HOM05D001366 ORTHO05D005449 8.2e-09 63.5 55 63.6
HanXRQChr11g0353851 Helianthus annuus HOM05D001366 ORTHO05D005449 1.1e-08 63.2 36 83.3
AagrBONN_evm.TU.Sc2ySwM_368.1269 Anthoceros agrestis HOM05D001366 ORTHO05D005449 2.0e-07 58.9 57 47.4
C06p07570 Brassica napus HOM05D001366 ORTHO05D005449 3.5e-07 58.2 43 74.4
BolC6t35845H Brassica oleracea HOM05D001366 ORTHO05D005449 3.5e-07 58.2 43 74.4
Lsat_1_v5_gn_8_45161 Lactuca sativa HOM05D001675 ORTHO05D001808 5.9e-07 57.4 38 78.9
Haze_27711 Corylus avellana HOM05D001366 ORTHO05D005449 2.9e-06 55.1 59 42.4
Mapoly0067s0078 Marchantia polymorpha HOM05D001366 ORTHO05D005449 5.0e-06 54.3 56 48.2


User provided reference genes

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