Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL08p052505 Quercus lobata HOM05D004484 ORTHO05D005370 7.1e-101 370.5 181 100.0
QL08p052472 Quercus lobata HOM05D004484 ORTHO05D005370 6.7e-67 257.7 177 76.8
CiPaw.01G262000 Carya illinoinensis HOM05D004484 ORTHO05D005370 5.5e-53 211.5 176 64.8
Haze_16815 Corylus avellana HOM05D004484 ORTHO05D005370 8.0e-52 207.6 175 64.0
Cfa001721 Carpinus fangiana HOM05D004484 ORTHO05D005370 2.3e-51 206.1 175 63.4
GSVIVG01027610001 Vitis vinifera HOM05D004484 ORTHO05D005370 7.2e-45 184.5 181 56.4
Lj3g0013484 Lotus japonicus HOM05D004484 ORTHO05D005370 2.1e-44 183.0 170 60.6
Prupe.2G145600 Prunus persica HOM05D004484 ORTHO05D005370 2.8e-44 182.6 175 58.9
Lalb_Chr13g0291731 Lupinus albus HOM05D004484 ORTHO05D005370 6.8e-43 177.9 179 55.3
Dinv32377 Davidia involucrata HOM05D004484 ORTHO05D005370 8.9e-43 177.6 182 54.4
RcHm_v2.0_Chr1g0350571 Rosa chinensis HOM05D004484 ORTHO05D005370 1.2e-42 177.2 180 58.9
Ca_19886_v3 Cicer arietinum L. HOM05D004484 ORTHO05D005370 2.0e-42 176.4 173 57.8
Oeu055487.1 Olea europaea HOM05D004484 ORTHO05D005370 2.0e-42 176.4 175 54.9
vmacro13399 Vaccinium macrocarpon HOM05D004484 ORTHO05D005370 2.0e-42 176.4 181 56.9
Nn1g01233 Nelumbo nucifera HOM05D004484 ORTHO05D005370 2.6e-42 176.0 171 54.4
FvH4_7g11900 Fragaria vesca HOM05D004484 ORTHO05D005370 4.4e-42 175.3 178 58.4
FAN06G1787 Fragaria x ananassa HOM05D004484 ORTHO05D005370 4.4e-42 175.3 178 58.4
FAN10G1483 Fragaria x ananassa HOM05D004484 ORTHO05D005370 4.4e-42 175.3 178 58.4
FAN10G2369 Fragaria x ananassa HOM05D004484 ORTHO05D005370 4.4e-42 175.3 178 58.4
FAN06G3319 Fragaria x ananassa HOM05D004484 ORTHO05D005370 5.7e-42 174.9 178 57.9
Hma1.2p1_0086F.1_g044870 Hydrangea macrophylla HOM05D004484 ORTHO05D005370 1.7e-41 173.3 181 53.6
Hma1.2p1_0086F.1_g044880 Hydrangea macrophylla HOM05D004484 ORTHO05D005370 1.7e-41 173.3 181 53.6
FAN01G0628 Fragaria x ananassa HOM05D004484 ORTHO05D005370 3.7e-41 172.2 178 57.9
Phvul.002G205800 Phaseolus vulgaris HOM05D004484 ORTHO05D005370 3.7e-41 172.2 169 55.0
TPR.G9845 Trifolium pratense HOM05D004484 ORTHO05D005370 4.9e-41 171.8 156 60.3
TWI23G0227 Tripterygium wilfordii HOM05D004484 ORTHO05D005370 8.3e-41 171.0 176 52.3
CSS0036976 Camellia sinensis var. sinensis HOM05D004484 ORTHO05D005370 1.1e-40 170.6 166 56.6
Medtr4g023560 Medicago truncatula HOM05D004484 ORTHO05D005370 1.1e-40 170.6 181 54.7
Ca_27059_v3 Cicer arietinum L. HOM05D004484 ORTHO05D005370 1.4e-40 170.2 173 56.6
PGR042G0667 Punica granatum HOM05D004484 ORTHO05D005370 1.4e-40 170.2 180 51.7
VMungo0251G1206 Vigna mungo HOM05D004484 ORTHO05D005370 4.1e-40 168.7 172 52.3
Sed0020955 Sechium edule HOM05D004484 ORTHO05D005370 7.0e-40 167.9 170 54.7
CANSAT56G4533 Cannabis sativa HOM05D004484 ORTHO05D005370 1.2e-39 167.2 177 52.0
MD07G1121000 Malus domestica HOM05D004484 ORTHO05D005370 1.2e-39 167.2 155 60.6
FAN03G1897 Fragaria x ananassa HOM05D004484 ORTHO05D005370 4.5e-39 165.2 178 56.2
HanXRQChr16g0520161 Helianthus annuus HOM05D004484 ORTHO05D005370 7.8e-39 164.5 171 52.0
Glyma.05G125700 Glycine max HOM05D004484 ORTHO05D005370 1.7e-38 163.3 173 56.1
Peaxi162Scf00021g01723 Petunia axillaris HOM05D004484 ORTHO05D005370 1.7e-38 163.3 178 51.7
Lalb_Chr12g0208261 Lupinus albus HOM05D004484 ORTHO05D005370 2.3e-38 162.9 176 52.3
Psat7g233440 Pisum sativum HOM05D004484 ORTHO05D005370 5.0e-38 161.8 173 53.8
MELO3C006188.2 Cucumis melo HOM05D004484 ORTHO05D005370 1.9e-37 159.8 171 50.3
ClCG05G002220 Citrullus lanatus HOM05D004484 ORTHO05D005370 3.3e-37 159.1 175 50.9
Eucgr.E01418 Eucalyptus grandis HOM05D004484 ORTHO05D005370 4.3e-37 158.7 155 56.1
Atru.chr5.309 Acer truncatum HOM05D004484 ORTHO05D005370 9.5e-37 157.5 166 51.2
Manes.01G265900 Manihot esculenta HOM05D004484 ORTHO05D005370 9.5e-37 157.5 182 51.6
Lsat_1_v5_gn_4_43240 Lactuca sativa HOM05D004484 ORTHO05D005370 1.2e-36 157.1 168 50.0
Cc02_g36700 Coffea canephora HOM05D004484 ORTHO05D005370 2.8e-36 156.0 177 50.3
Nitab4.5_0000457g0330 Nicotiana tabacum HOM05D004484 ORTHO05D005370 3.6e-36 155.6 182 51.1
Nitab4.5_0005372g0070 Nicotiana tabacum HOM05D004484 ORTHO05D005370 3.6e-36 155.6 182 50.5
CAN.G388.13 Capsicum annuum HOM05D004484 ORTHO05D005370 8.0e-36 154.5 177 48.0
CANSAT56G1200 Cannabis sativa HOM05D004484 ORTHO05D005370 2.3e-35 152.9 177 48.6
Aqoxy5G00403 Aquilegia oxysepala HOM05D004484 ORTHO05D005370 6.8e-35 151.4 178 47.8
arahy.Tifrunner.gnm1.ann1.V1M046 Arachis hypogaea HOM05D004484 ORTHO05D005370 1.2e-34 150.6 174 48.9
Lj7A528T57 Lonicera japonica HOM05D004484 ORTHO05D005370 2.0e-34 149.8 183 49.7
SGA_v2.0_scaffold153G37012 Striga asiatica HOM05D004484 ORTHO05D005370 2.0e-34 149.8 181 47.0
Potri.014G069700 Populus trichocarpa HOM05D004484 ORTHO05D005370 2.6e-34 149.4 156 53.8
CsaV3_3G009680 Cucumis sativus L. HOM05D004484 ORTHO05D005370 3.4e-34 149.1 171 49.1
ECA234G1700 Erigeron canadensis HOM05D004484 ORTHO05D005370 3.4e-34 149.1 171 48.0
arahy.Tifrunner.gnm1.ann1.6K85L9 Arachis hypogaea HOM05D004484 ORTHO05D005370 4.4e-34 148.7 174 48.3
arahy.Tifrunner.gnm1.ann1.HW1IVJ Arachis hypogaea HOM05D004484 ORTHO05D005370 4.4e-34 148.7 174 48.3
GSVIVG01027609001 Vitis vinifera HOM05D004484 ORTHO05D005370 4.4e-34 148.7 181 47.5
Ciclev10019016m.g Citrus clementina HOM05D004484 ORTHO05D005370 7.5e-34 147.9 179 47.5
Migut.B01635 Erythranthe guttata HOM05D004484 ORTHO05D005370 9.8e-34 147.5 181 47.5
Sopen01g037090 Solanum pennellii HOM05D004484 ORTHO05D005370 9.8e-34 147.5 178 47.2
Aqoxy3G02138 Aquilegia oxysepala HOM05D004484 ORTHO05D005370 1.3e-33 147.1 175 44.6
Cpa.g.sc18.115 Carica papaya HOM05D004484 ORTHO05D005370 1.7e-33 146.7 181 48.6
arahy.Tifrunner.gnm1.ann1.Q9SWB6 Arachis hypogaea HOM05D004484 ORTHO05D005370 3.7e-33 145.6 174 47.1
MSTRG.20748 Avicennia marina HOM05D004484 ORTHO05D005370 3.7e-33 145.6 181 47.0
DCAR_015907 Daucus carota HOM05D004484 ORTHO05D005370 6.4e-33 144.8 180 48.9
Solyc01g091350.4 Solanum lycopersicum HOM05D004484 ORTHO05D005370 6.4e-33 144.8 178 46.6
PGSC0003DMG400012761 Solanum tuberosum HOM05D004484 ORTHO05D005370 2.4e-32 142.9 174 46.6
TAR629G2468 Trochodendron aralioides HOM05D004484 ORTHO05D005370 3.2e-32 142.5 162 50.0
Thecc.01G376200 Theobroma cacao HOM05D004484 ORTHO05D005370 4.1e-32 142.1 174 44.8
AUR62013627 Chenopodium quinoa HOM05D004484 ORTHO05D005370 5.4e-32 141.7 163 49.1
Hund27347 Selenicereus undatus HOM05D004484 ORTHO05D005370 5.4e-32 141.7 163 49.7
PSO478G5008 Papaver somniferum HOM05D004484 ORTHO05D005370 1.2e-31 140.6 176 46.0
MBI12_g10758_MAGBIO Magnolia biondii HOM05D004484 ORTHO05D005370 1.3e-30 137.1 167 47.9
Sabra14G0049400 Salix brachista HOM05D004484 ORTHO05D005370 3.0e-30 136.0 177 46.3
EL10Ac1g00900 Beta vulgaris HOM05D004484 ORTHO05D005370 3.9e-30 135.6 163 46.0
Gorai.007G091100 Gossypium raimondii HOM05D004484 ORTHO05D005370 5.0e-30 135.2 169 43.2
Gohir.D11G085300 Gossypium hirsutum HOM05D004484 ORTHO05D005370 6.6e-30 134.8 168 42.3
CDE04G3156 Ceratophyllum demersum HOM05D004484 ORTHO05D005370 4.7e-28 128.6 167 43.1
Sc02g0002590 Simmondsia chinensis HOM05D004484 ORTHO05D005370 1.4e-27 127.1 159 45.9
unitig_749.g13780 Utricularia gibba HOM05D004484 ORTHO05D005370 4.0e-27 125.6 158 44.9
AUR62004221 Chenopodium quinoa HOM05D004484 ORTHO05D005370 8.9e-27 124.4 173 43.9
Gohir.A11G080700 Gossypium hirsutum HOM05D004484 ORTHO05D005370 1.5e-26 123.6 167 41.3
Ah.13g073490 Amaranthus hybridus HOM05D004484 ORTHO05D005370 8.3e-25 117.9 153 43.8
BcaB04g17469 Brassica carinata HOM05D004484 ORTHO05D005370 1.9e-24 116.7 160 43.8
BraSC267t45947Z Brassica rapa HOM05D004484 ORTHO05D005370 2.4e-24 116.3 153 41.8
HPP92_027818 Vanilla planifolia HOM05D004484 ORTHO05D005370 1.2e-23 114.0 172 40.1
BcaC07g37180 Brassica carinata HOM05D004484 ORTHO05D005370 4.6e-23 112.1 155 42.6
C08p05620 Brassica napus HOM05D004484 ORTHO05D005370 4.6e-23 112.1 153 41.8
BolC8t47375H Brassica oleracea HOM05D004484 ORTHO05D005370 4.6e-23 112.1 153 41.8
SEGI_20047 Sequoiadendron giganteum HOM05D004484 ORTHO05D005370 6.0e-23 111.7 171 39.8
COL.COLO4_12548 Corchorus olitorius HOM05D004484 ORTHO05D005370 5.6e-21 105.1 144 40.3
THA.LOC104817247 Tarenaya hassleriana HOM05D004484 ORTHO05D005370 2.8e-20 102.8 150 41.3
CARHR037700 Cardamine hirsuta HOM05D004484 ORTHO05D005370 6.8e-19 98.2 160 38.8
Sp1g35020 Schrenkiella parvula HOM05D004484 ORTHO05D005370 8.9e-19 97.8 143 41.3
Carub.0001s3716 Capsella rubella HOM05D004484 ORTHO05D005370 1.2e-18 97.4 158 39.9
AT1G48050 Arabidopsis thaliana HOM05D004484 ORTHO05D005370 2.6e-18 96.3 161 39.8
SMO367G0514 Selaginella moellendorffii HOM05D004484 ORTHO05D005370 3.4e-18 95.9 157 38.2
AL1G54570 Arabidopsis lyrata HOM05D004484 ORTHO05D005370 5.8e-18 95.1 156 40.4
A08p05330 Brassica napus HOM05D004484 ORTHO05D005370 9.9e-18 94.4 135 41.5
arahy.Tifrunner.gnm1.ann1.T9R8PC Arachis hypogaea HOM05D004484 ORTHO05D005370 1.1e-16 90.9 176 38.1
Eucgr.E01421 Eucalyptus grandis HOM05D004484 ORTHO05D005370 1.4e-16 90.5 63 69.8
arahy.Tifrunner.gnm1.ann1.47H85H Arachis hypogaea HOM05D004484 ORTHO05D005370 1.9e-16 90.1 140 36.4
Pp3c22_11100 Physcomitrium patens HOM05D004484 ORTHO05D005370 1.9e-16 90.1 161 37.9
Solyc01g091430.2 Solanum lycopersicum HOM05D004484 ORTHO05D005370 1.6e-15 87.0 122 45.1
Eucgr.L02075 Eucalyptus grandis HOM05D004484 ORTHO05D005370 2.7e-15 86.3 63 68.3
arahy.Tifrunner.gnm1.ann1.03ZR4A Arachis hypogaea HOM05D004484 ORTHO05D005370 3.5e-15 85.9 155 37.4
CAN.G388.14 Capsicum annuum HOM05D004484 ORTHO05D005370 1.7e-14 83.6 63 60.3
Zm00001eb064930 Zea mays HOM05D004484 ORTHO05D005370 3.0e-14 82.8 176 33.0
AagrBONN_evm.TU.Sc2ySwM_368.3373 Anthoceros agrestis HOM05D004484 ORTHO05D005370 6.6e-14 81.6 173 32.4
SHI13523 Sapria himalayana HOM05D004484 ORTHO05D005370 1.5e-13 80.5 110 40.9
arahy.Tifrunner.gnm1.ann1.5WGS6V Arachis hypogaea HOM05D004484 ORTHO05D005370 1.5e-10 70.5 124 36.3
Aa31LG10G5650 Aethionema arabicum HOM05D004484 ORTHO05D005370 2.0e-10 70.1 155 35.5
Oeu032522.1 Olea europaea HOM05D004484 ORTHO05D005370 1.1e-08 64.3 61 57.4
Eucgr.I00725 Eucalyptus grandis HOM05D004484 ORTHO05D005370 1.9e-08 63.5 55 58.2
Mapoly0129s0012 Marchantia polymorpha HOM05D004484 ORTHO05D005370 9.3e-08 61.2 59 42.4
Thhalv10011351m.g Eutrema salsugineum HOM05D004484 ORTHO05D005370 1.2e-07 60.8 60 58.3


User provided reference genes

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