Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p103162 Quercus lobata HOM05D000572 ORTHO05D002399 1.0e-118 430.3 249 100.0
Dinv29674 Davidia involucrata HOM05D000572 ORTHO05D002399 2.4e-62 243.0 199 61.8
MELO3C026448.2 Cucumis melo HOM05D000572 ORTHO05D002399 6.9e-62 241.5 197 59.4
CsaV3_5G013990 Cucumis sativus L. HOM05D000572 ORTHO05D002399 6.9e-62 241.5 197 59.4
ClCG11G000400 Citrullus lanatus HOM05D000572 ORTHO05D002399 1.2e-61 240.7 197 59.9
TWI15G0599 Tripterygium wilfordii HOM05D000572 ORTHO05D002399 1.3e-60 237.3 244 51.6
CSS0016257 Camellia sinensis var. sinensis HOM05D000572 ORTHO05D002399 1.7e-60 236.9 200 60.0
CSS0042457 Camellia sinensis var. sinensis HOM05D000572 ORTHO05D002399 2.9e-60 236.1 200 60.0
Atru.chr1.1803 Acer truncatum HOM05D000572 ORTHO05D002399 3.8e-60 235.7 199 59.8
Rhsim11G0118300 Rhododendron simsii HOM05D000572 ORTHO05D002399 1.1e-59 234.2 176 65.3
TWI63G0302 Tripterygium wilfordii HOM05D000572 ORTHO05D002399 2.4e-59 233.0 244 50.8
Ciclev10027585m.g Citrus clementina HOM05D000572 ORTHO05D002399 3.2e-59 232.6 187 58.3
Sed0009647 Sechium edule HOM05D000572 ORTHO05D002399 7.1e-59 231.5 197 56.9
Dinv19128 Davidia involucrata HOM05D000572 ORTHO05D002399 6.0e-58 228.4 192 59.4
Atru.chr12.1878 Acer truncatum HOM05D000572 ORTHO05D002399 7.9e-58 228.0 185 60.5
Haze_19377 Corylus avellana HOM05D000572 ORTHO05D002399 7.9e-58 228.0 200 57.0
PGR119G1310 Punica granatum HOM05D000572 ORTHO05D002399 2.3e-57 226.5 196 59.2
Manes.13G155232 Manihot esculenta HOM05D000572 ORTHO05D002399 3.0e-57 226.1 187 56.7
Cc07_g19880 Coffea canephora HOM05D000572 ORTHO05D002399 8.7e-57 224.6 192 57.8
Glyma.06G178200 Glycine max HOM05D000572 ORTHO05D002399 8.7e-57 224.6 190 55.8
Manes.13G119400 Manihot esculenta HOM05D000572 ORTHO05D002399 1.1e-56 224.2 187 56.1
Nn5g27348 Nelumbo nucifera HOM05D000572 ORTHO05D002399 1.1e-56 224.2 191 57.6
Nn5g27349 Nelumbo nucifera HOM05D000572 ORTHO05D002399 1.1e-56 224.2 191 57.6
Glyma.04G187600 Glycine max HOM05D000572 ORTHO05D002399 1.9e-56 223.4 190 56.8
Hund15395 Selenicereus undatus HOM05D000572 ORTHO05D002399 2.5e-56 223.0 194 57.7
Lj2A766T19 Lonicera japonica HOM05D000572 ORTHO05D002399 3.3e-56 222.6 194 55.2
Nitab4.5_0004345g0030 Nicotiana tabacum HOM05D000572 ORTHO05D002399 4.3e-56 222.2 187 57.8
Oeu032220.1 Olea europaea HOM05D000572 ORTHO05D002399 4.3e-56 222.2 195 57.9
MSTRG.27892 Avicennia marina HOM05D000572 ORTHO05D002399 1.3e-55 220.7 186 58.6
Lj5A282T76 Lonicera japonica HOM05D000572 ORTHO05D002399 2.8e-55 219.5 197 55.3
MBI03_g20877_MAGBIO Magnolia biondii HOM05D000572 ORTHO05D002399 2.8e-55 219.5 195 53.8
Gohir.A05G373000 Gossypium hirsutum HOM05D000572 ORTHO05D002399 3.7e-55 219.2 175 60.6
THA.LOC104820805 Tarenaya hassleriana HOM05D000572 ORTHO05D002399 4.8e-55 218.8 189 54.5
Thecc.01G144800 Theobroma cacao HOM05D000572 ORTHO05D002399 4.8e-55 218.8 189 57.1
Potri.018G138000 Populus trichocarpa HOM05D000572 ORTHO05D002399 8.1e-55 218.0 187 55.6
Potri.T046100 Populus trichocarpa HOM05D000572 ORTHO05D002399 8.1e-55 218.0 187 55.6
Ca_03350_v3 Cicer arietinum L. HOM05D000572 ORTHO05D002399 1.1e-54 217.6 190 54.7
Nitab4.5_0004640g0010 Nicotiana tabacum HOM05D000572 ORTHO05D002399 1.1e-54 217.6 187 56.7
Sabra19G0000100 Salix brachista HOM05D000572 ORTHO05D002399 1.4e-54 217.2 187 55.1
Potri.004G134000 Populus trichocarpa HOM05D000572 ORTHO05D002399 1.8e-54 216.9 187 54.0
Duzib147G0313 Durio zibethinus HOM05D000572 ORTHO05D002399 2.4e-54 216.5 187 56.7
QL10p035076 Quercus lobata HOM05D000572 ORTHO05D002399 2.4e-54 216.5 188 57.4
THA.LOC104823726 Tarenaya hassleriana HOM05D000572 ORTHO05D002399 2.4e-54 216.5 189 53.4
CAN.G1330.38 Capsicum annuum HOM05D000572 ORTHO05D002399 3.1e-54 216.1 187 57.2
VMungo0464G1362 Vigna mungo HOM05D000572 ORTHO05D002399 3.1e-54 216.1 199 52.3
Gorai.012G048000 Gossypium raimondii HOM05D000572 ORTHO05D002399 4.0e-54 215.7 175 60.0
arahy.Tifrunner.gnm1.ann1.I0VWWF Arachis hypogaea HOM05D000572 ORTHO05D002399 5.3e-54 215.3 191 53.9
Sc02g0000170 Simmondsia chinensis HOM05D000572 ORTHO05D002399 5.3e-54 215.3 174 58.6
arahy.Tifrunner.gnm1.ann1.5512QZ Arachis hypogaea HOM05D000572 ORTHO05D002399 6.9e-54 214.9 191 53.4
CiPaw.12G053900 Carya illinoinensis HOM05D000572 ORTHO05D002399 6.9e-54 214.9 189 55.0
vmacro01683 Vaccinium macrocarpon HOM05D000572 ORTHO05D002399 9.0e-54 214.5 177 61.6
Sabra04G0084200 Salix brachista HOM05D000572 ORTHO05D002399 1.2e-53 214.2 187 54.5
Solyc11g030600.3 Solanum lycopersicum HOM05D000572 ORTHO05D002399 1.5e-53 213.8 197 54.3
Sopen11g013460 Solanum pennellii HOM05D000572 ORTHO05D002399 1.5e-53 213.8 197 54.3
Lj3g0025806 Lotus japonicus HOM05D000572 ORTHO05D002399 2.0e-53 213.4 190 51.6
Peaxi162Scf01053g00039 Petunia axillaris HOM05D000572 ORTHO05D002399 2.0e-53 213.4 182 57.7
Ah.04g152120 Amaranthus hybridus HOM05D000572 ORTHO05D002399 4.5e-53 212.2 199 54.3
Gohir.D04G042500 Gossypium hirsutum HOM05D000572 ORTHO05D002399 5.8e-53 211.8 169 61.5
Medtr6g065580 Medicago truncatula HOM05D000572 ORTHO05D002399 9.9e-53 211.1 190 52.6
PGSC0003DMG400030941 Solanum tuberosum HOM05D000572 ORTHO05D002399 1.3e-52 210.7 187 55.6
Lj2g0020412 Lotus japonicus HOM05D000572 ORTHO05D002399 1.7e-52 210.3 190 51.1
MD15G1231100 Malus domestica HOM05D000572 ORTHO05D002399 1.7e-52 210.3 187 55.6
GSVIVG01000263001 Vitis vinifera HOM05D000572 ORTHO05D002399 1.7e-52 210.3 167 59.9
EL10Ac8g18295 Beta vulgaris HOM05D000572 ORTHO05D002399 2.2e-52 209.9 199 52.3
ECA236G0624 Erigeron canadensis HOM05D000572 ORTHO05D002399 2.2e-52 209.9 196 54.6
Medtr2g046020 Medicago truncatula HOM05D000572 ORTHO05D002399 2.9e-52 209.5 190 52.6
Eucgr.I00036 Eucalyptus grandis HOM05D000572 ORTHO05D002399 4.9e-52 208.8 189 56.1
PSO210G2968 Papaver somniferum HOM05D000572 ORTHO05D002399 4.9e-52 208.8 189 56.6
Aqoxy1G02545 Aquilegia oxysepala HOM05D000572 ORTHO05D002399 6.4e-52 208.4 195 55.4
AUR62021310 Chenopodium quinoa HOM05D000572 ORTHO05D002399 6.4e-52 208.4 200 52.5
AUR62043444 Chenopodium quinoa HOM05D000572 ORTHO05D002399 6.4e-52 208.4 200 53.0
Lalb_Chr01g0008651 Lupinus albus HOM05D000572 ORTHO05D002399 6.4e-52 208.4 192 50.0
PSO447G0024 Papaver somniferum HOM05D000572 ORTHO05D002399 6.4e-52 208.4 189 56.6
CAN.G868.5 Capsicum annuum HOM05D000572 ORTHO05D002399 8.4e-52 208.0 187 55.1
AUR62001561 Chenopodium quinoa HOM05D000572 ORTHO05D002399 1.9e-51 206.8 197 53.8
MD02G1115100 Malus domestica HOM05D000572 ORTHO05D002399 1.9e-51 206.8 195 52.8
CDE12G0633 Ceratophyllum demersum HOM05D000572 ORTHO05D002399 3.2e-51 206.1 196 52.0
Os07g0182900 Oryza sativa ssp. japonica HOM05D000572 ORTHO05D002399 3.2e-51 206.1 190 51.1
TAR628G1524 Trochodendron aralioides HOM05D000572 ORTHO05D002399 3.2e-51 206.1 195 52.3
unitig_26.g9010 Utricularia gibba HOM05D000572 ORTHO05D002399 3.2e-51 206.1 192 52.6
Sp4g01970 Schrenkiella parvula HOM05D000572 ORTHO05D002399 4.2e-51 205.7 191 51.8
DCAR_009626 Daucus carota HOM05D000572 ORTHO05D002399 5.5e-51 205.3 187 56.1
HanXRQChr11g0347301 Helianthus annuus HOM05D000572 ORTHO05D002399 5.5e-51 205.3 199 51.8
SGA_v2.0_scaffold8G04469 Striga asiatica HOM05D000572 ORTHO05D002399 5.5e-51 205.3 187 57.8
Lj5g0006387 Lotus japonicus HOM05D000572 ORTHO05D002399 7.1e-51 204.9 194 51.5
Prupe.7G183100 Prunus persica HOM05D000572 ORTHO05D002399 9.3e-51 204.5 189 52.9
SHI05188 Sapria himalayana HOM05D000572 ORTHO05D002399 1.2e-50 204.1 176 59.7
TPR.G37134 Trifolium pratense HOM05D000572 ORTHO05D002399 1.6e-50 203.8 199 51.3
Thhalv10003514m.g Eutrema salsugineum HOM05D000572 ORTHO05D002399 2.1e-50 203.4 189 50.8
Lsat_1_v5_gn_7_75121 Lactuca sativa HOM05D000572 ORTHO05D002399 2.1e-50 203.4 197 53.3
DCAR_019941 Daucus carota HOM05D000572 ORTHO05D002399 2.7e-50 203.0 172 58.1
Oeu046383.1 Olea europaea HOM05D000572 ORTHO05D002399 3.5e-50 202.6 172 59.9
DCAR_003283 Daucus carota HOM05D000572 ORTHO05D002399 4.6e-50 202.2 197 52.8
Lalb_Chr03g0033391 Lupinus albus HOM05D000572 ORTHO05D002399 6.0e-50 201.8 191 50.3
HanXRQChr04g0120041 Helianthus annuus HOM05D000572 ORTHO05D002399 7.9e-50 201.4 198 52.5
TPR.G12077 Trifolium pratense HOM05D000572 ORTHO05D002399 2.3e-49 199.9 190 51.6
CANSAT01G1917 Cannabis sativa HOM05D000572 ORTHO05D002399 5.1e-49 198.7 198 54.5
Cpa.g.sc37.192 Carica papaya HOM05D000572 ORTHO05D002399 5.1e-49 198.7 159 58.5
Carub.0008s0898 Capsella rubella HOM05D000572 ORTHO05D002399 8.7e-49 198.0 189 50.3
Phvul.004G133200 Phaseolus vulgaris HOM05D000572 ORTHO05D002399 8.7e-49 198.0 190 48.4
Aqoxy7G03575 Aquilegia oxysepala HOM05D000572 ORTHO05D002399 1.1e-48 197.6 195 53.3
Aqoxy7G03579 Aquilegia oxysepala HOM05D000572 ORTHO05D002399 1.1e-48 197.6 195 53.3
VMungo0464G1539 Vigna mungo HOM05D000572 ORTHO05D002399 1.5e-48 197.2 190 51.6
SGA_v2.0_scaffold122G33283 Striga asiatica HOM05D000572 ORTHO05D002399 3.3e-48 196.1 187 54.0
CARHR182510 Cardamine hirsuta HOM05D000572 ORTHO05D002399 5.6e-48 195.3 189 48.7
AUR62028017 Chenopodium quinoa HOM05D000572 ORTHO05D002399 2.1e-47 193.4 175 54.3
Aa31LG11G8250 Aethionema arabicum HOM05D000572 ORTHO05D002399 8.2e-47 191.4 189 49.7
Thhalv10005683m.g Eutrema salsugineum HOM05D000572 ORTHO05D002399 8.2e-47 191.4 189 49.7
TPR.G31040 Trifolium pratense HOM05D000572 ORTHO05D002399 8.2e-47 191.4 199 48.7
Zm00001eb301620 Zea mays HOM05D000572 ORTHO05D002399 8.2e-47 191.4 190 46.8
Zm00001eb301630 Zea mays HOM05D000572 ORTHO05D002399 8.2e-47 191.4 190 46.8
Ah.01g020670 Amaranthus hybridus HOM05D000572 ORTHO05D002399 1.1e-46 191.0 175 52.6
AL8G22690 Arabidopsis lyrata HOM05D000572 ORTHO05D002399 1.1e-46 191.0 189 48.1
Os03g0798300 Oryza sativa ssp. japonica HOM05D000572 ORTHO05D002399 2.4e-46 189.9 190 46.8
FAN26G0750 Fragaria x ananassa HOM05D000572 ORTHO05D002399 4.0e-46 189.1 201 50.7
Sp2g19890 Schrenkiella parvula HOM05D000572 ORTHO05D002399 1.2e-45 187.6 190 48.4
FvH4_1g10300 Fragaria vesca HOM05D000572 ORTHO05D002399 1.5e-45 187.2 201 50.7
FAN19G1502 Fragaria x ananassa HOM05D000572 ORTHO05D002399 1.5e-45 187.2 201 50.7
RcHm_v2.0_Chr5g0051581 Rosa chinensis HOM05D000572 ORTHO05D002399 2.6e-45 186.4 184 52.7
HPP92_005786 Vanilla planifolia HOM05D000572 ORTHO05D002399 2.6e-45 186.4 169 52.7
AT5G49160 Arabidopsis thaliana HOM05D000572 ORTHO05D002399 4.5e-45 185.7 170 52.9
BcaC07g41015 Brassica carinata HOM05D000572 ORTHO05D002399 4.5e-45 185.7 192 47.9
C08p40170 Brassica napus HOM05D000572 ORTHO05D002399 1.3e-44 184.1 192 47.4
RcHm_v2.0_Chr2g0097141 Rosa chinensis HOM05D000572 ORTHO05D002399 1.3e-44 184.1 190 50.0
A09p57170 Brassica napus HOM05D000572 ORTHO05D002399 2.9e-44 183.0 193 46.1
BolC8t51587H Brassica oleracea HOM05D000572 ORTHO05D002399 2.9e-44 183.0 192 47.4
BraA09t41110Z Brassica rapa HOM05D000572 ORTHO05D002399 2.9e-44 183.0 193 46.1
GSVIVG01000262001 Vitis vinifera HOM05D000572 ORTHO05D002399 2.9e-44 183.0 145 60.0
Carub.0004s0387 Capsella rubella HOM05D000572 ORTHO05D002399 8.7e-41 171.4 176 51.1
BraA04t17374Z Brassica rapa HOM05D000572 ORTHO05D002399 1.9e-40 170.2 167 50.3
TAR633G0967 Trochodendron aralioides HOM05D000572 ORTHO05D002399 2.5e-40 169.9 144 58.3
CARHR287820 Cardamine hirsuta HOM05D000572 ORTHO05D002399 7.4e-40 168.3 177 48.0
Cc02_g23510 Coffea canephora HOM05D000572 ORTHO05D002399 1.3e-39 167.5 173 47.4
SEGI_36703 Sequoiadendron giganteum HOM05D000572 ORTHO05D002399 1.3e-39 167.5 186 46.2
AT4G08990 Arabidopsis thaliana HOM05D000572 ORTHO05D002399 1.6e-39 167.2 170 49.4
Ciclev10003166m.g Citrus clementina HOM05D000572 ORTHO05D002399 2.2e-39 166.8 180 49.4
AL7G42360 Arabidopsis lyrata HOM05D000572 ORTHO05D002399 2.8e-39 166.4 170 49.4
AT4G14140 Arabidopsis thaliana HOM05D000572 ORTHO05D002399 4.8e-39 165.6 170 49.4
AL7G42980 Arabidopsis lyrata HOM05D000572 ORTHO05D002399 6.3e-39 165.2 168 50.0
BolC4t26803H Brassica oleracea HOM05D000572 ORTHO05D002399 8.2e-39 164.9 168 50.6
C04p52290 Brassica napus HOM05D000572 ORTHO05D002399 1.1e-38 164.5 168 50.0
SEGI_11646 Sequoiadendron giganteum HOM05D000572 ORTHO05D002399 1.1e-38 164.5 184 46.2
BcaC02g08585 Brassica carinata HOM05D000572 ORTHO05D002399 1.8e-38 163.7 168 50.0
AT4G13610 Arabidopsis thaliana HOM05D000572 ORTHO05D002399 3.1e-38 162.9 146 56.2
Migut.N00875 Erythranthe guttata HOM05D000572 ORTHO05D002399 4.1e-38 162.5 189 46.6
SEGI_20274 Sequoiadendron giganteum HOM05D000572 ORTHO05D002399 4.1e-38 162.5 184 46.7
BcaB06g27851 Brassica carinata HOM05D000572 ORTHO05D002399 1.2e-37 161.0 168 50.0
CARHR070500 Cardamine hirsuta HOM05D000572 ORTHO05D002399 2.0e-37 160.2 151 51.0
ATR0584G123 Amborella trichopoda HOM05D000572 ORTHO05D002399 7.6e-37 158.3 192 44.8
Ciclev10003543m.g Citrus clementina HOM05D000572 ORTHO05D002399 2.2e-36 156.8 143 54.5
CARHR185430 Cardamine hirsuta HOM05D000572 ORTHO05D002399 6.5e-36 155.2 168 48.2
Psat3g159120 Pisum sativum HOM05D000572 ORTHO05D002399 4.6e-34 149.1 172 46.5
FAN11G2057 Fragaria x ananassa HOM05D000572 ORTHO05D002399 6.1e-34 148.7 165 47.3
Thhalv10000011m.g Eutrema salsugineum HOM05D000572 ORTHO05D002399 1.9e-32 143.7 195 40.5
Medtr3g026210 Medicago truncatula HOM05D000572 ORTHO05D002399 5.7e-32 142.1 113 56.6
Carub.0007s2893 Capsella rubella HOM05D000572 ORTHO05D002399 2.8e-31 139.8 180 46.7
AagrBONN_evm.TU.Sc2ySwM_368.2421 Anthoceros agrestis HOM05D000572 ORTHO05D002399 1.4e-30 137.5 158 40.5
vmacro19834 Vaccinium macrocarpon HOM05D000572 ORTHO05D002399 1.4e-30 137.5 108 57.4
CDE01G0045 Ceratophyllum demersum HOM05D000572 ORTHO05D002399 1.5e-29 134.0 110 51.8
SMO358G0070 Selaginella moellendorffii HOM05D000572 ORTHO05D002399 1.7e-28 130.6 192 38.0
Pp3c11_20540 Physcomitrium patens HOM05D000572 ORTHO05D002399 4.4e-24 115.9 148 39.2
Psat3g159080 Pisum sativum HOM05D000572 ORTHO05D002399 1.7e-20 104.0 80 60.0
Mapoly0038s0027 Marchantia polymorpha HOM05D000572 ORTHO05D002399 1.2e-18 97.8 161 32.9
ATR0820G075 Amborella trichopoda HOM05D010077 ORTHO05D013698 1.0e-17 94.7 137 38.7
ATR0820G235 Amborella trichopoda HOM05D010077 ORTHO05D013698 8.8e-17 91.7 140 38.6
FAN21G2448 Fragaria x ananassa HOM05D000572 ORTHO05D002399 5.7e-16 89.0 165 34.5
ATR0820G099 Amborella trichopoda HOM05D010077 ORTHO05D013698 2.8e-15 86.7 138 36.2
ATR0820G047 Amborella trichopoda HOM05D010077 ORTHO05D013698 8.2e-15 85.1 140 37.1
ATR0820G252 Amborella trichopoda HOM05D010077 ORTHO05D013698 1.1e-14 84.7 118 38.1
Duzib160G0412 Durio zibethinus HOM05D000572 ORTHO05D002399 1.4e-14 84.3 100 50.0
ATR0439G001 Amborella trichopoda HOM05D010077 ORTHO05D013698 1.2e-13 81.3 162 34.0
ATR0820G299 Amborella trichopoda HOM05D010077 ORTHO05D013698 1.2e-13 81.3 119 38.7
ATR0820G089 Amborella trichopoda HOM05D010077 ORTHO05D013698 3.5e-13 79.7 138 35.5
ATR0820G152 Amborella trichopoda HOM05D010077 ORTHO05D013698 3.5e-13 79.7 139 33.1
ATR0820G285 Amborella trichopoda HOM05D010077 ORTHO05D013698 4.5e-13 79.3 137 32.1
Oeu063107.2 Olea europaea HOM05D000572 ORTHO05D002399 8.5e-12 75.1 66 53.0
VMungo0385G0001 Vigna mungo HOM05D000572 ORTHO05D002399 7.2e-11 72.0 78 48.7
ATR0820G260 Amborella trichopoda HOM05D010077 ORTHO05D013698 1.2e-10 71.2 154 34.4
Psat1g114520 Pisum sativum HOM05D000572 ORTHO05D002399 4.7e-10 69.3 91 41.8
A04p17510 Brassica napus HOM05D000572 ORTHO05D002399 8.0e-10 68.6 68 52.9
AUR62020707 Chenopodium quinoa HOM05D000572 ORTHO05D002399 1.0e-09 68.2 134 32.1
HPP92_005802 Vanilla planifolia HOM05D000572 ORTHO05D002399 2.0e-08 63.9 72 50.0
COL.COLO4_12145 Corchorus olitorius HOM05D000572 ORTHO05D002399 9.7e-08 61.6 64 53.1
Psat2g046640 Pisum sativum HOM05D000572 ORTHO05D002399 1.7e-07 60.8 46 58.7
Actinidia19532 Actinidia chinensis HOM05D000572 ORTHO05D002399 3.7e-07 59.7 74 43.2
Psat4g163840 Pisum sativum HOM05D000572 ORTHO05D002399 4.8e-07 59.3 46 58.7
HPP92_005801 Vanilla planifolia HOM05D000572 ORTHO05D002399 1.1e-06 58.2 44 50.0
Psat0s3408g0040 Pisum sativum HOM05D000572 ORTHO05D002399 5.3e-06 55.8 44 59.1


User provided reference genes

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