Gene: AT5G49160

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G49160
  • Transcript Identifier AT5G49160.1
  • Gene Type Coding gene
  • Location Chr5 : 19932501-19938186 : positive

Gene Family Information

  • ID HOM05D000572
  • #Genes/#Species 968/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G49160.1
  • symbol MET1
  • Alias DDM2,DECREASED DNA METHYLATION 2,DMT01,DNA METHYLTRANSFERASE 01,DMT1,DNA METHYLTRANSFERASE 1,MET2,METHYLTRANSFERASE 2,METI,METHYLTRANSFERASE I
  • uniprot P34881

Descriptions

  • Description methyltransferase 1
  • Computational description methyltransferase 1 (MET1); FUNCTIONS IN: methyltransferase activity; INVOLVED IN: in 6 processes; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DNA (cytosine-5)-methyltransferase 1 (InterPro:IPR017198), DNA methylase, C-5 cytosine-specific (InterPro:IPR001525), Bromo adjacent homology (BAH) domain (InterPro:IPR001025), DNA methylase, C-5 cytosine-specific, active site (InterPro:IPR018117); BEST Arabidopsis thaliana protein match is: DNA (cytosine-5-)-methyltransferase family protein (TAIR:AT4G08990.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006821
ISO
PLAZA Homology (enrichment)chloride transport HOM05D000572
GO:0009835
ISO
PLAZA Integrative Orthologyfruit ripening Solyc11g030600.3
GO:0009793
ISO
PLAZA Integrative Orthologyembryo development ending in seed dormancy Os07g0182900
GO:0055085
ISO
PLAZA Homology (enrichment)transmembrane transport HOM05D000572
GO:0009836
ISO
PLAZA Integrative Orthologyfruit ripening, climacteric Solyc11g030600.3
GO:0016458
ISO
PLAZA Integrative Orthologygene silencing Os03g0798300
GO:0090116
IEA
Gene OntologyC-5 methylation of cytosine
GO:0090116
IEA
InterProC-5 methylation of cytosine
GO:0032259
IEA
GOA Databasemethylation
GO:0006325
IEA
GOA Databasechromatin organization
GO:0009910
IMP
Gene Ontologynegative regulation of flower development1
GO:0009294
IMP
Gene OntologyDNA mediated transformation2
GO:0010424
IMP
Gene OntologyDNA methylation on cytosine within a CG sequence3
GO:0010216
IMP
Gene Ontologymaintenance of DNA methylation4
GO:0006349
IMP
Gene Ontologyregulation of gene expression by genetic imprinting4
GO:0010069
IMP
Gene Ontologyzygote asymmetric cytokinesis in embryo sac5

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016740
IEA
GOA Databasetransferase activity
GO:0005247
ISO
PLAZA Homology (enrichment)voltage-gated chloride channel activity HOM05D000572
GO:0003886
IEA
Gene OntologyDNA (cytosine-5-)-methyltransferase activity
GO:0003886
IEA
InterProDNA (cytosine-5-)-methyltransferase activity
GO:0008168
IEA
GOA Databasemethyltransferase activity
GO:0008168
TAS
Gene Ontologymethyltransferase activity6
GO:0008168
IEA
InterPromethyltransferase activity
GO:0003682
IEA
Gene Ontologychromatin binding
GO:0003682
IEA
InterProchromatin binding
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0005515
IPI
Gene Ontologyprotein binding7

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016020
ISO
PLAZA Homology (enrichment)membrane HOM05D000572
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
ISM, IBA
Gene Ontologynucleus8
GO:0005634
IEA
InterPronucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR022702 DNA (cytosine-5)-methyltransferase 1, replication foci domain
IPR001025 Bromo adjacent homology (BAH) domain
IPR043151 Bromo adjacent homology (BAH) domain superfamily
IPR029063 S-adenosyl-L-methionine-dependent methyltransferase
IPR001525 C-5 cytosine methyltransferase
IPR017198 DNA (cytosine-5)-methyltransferase 1-like
Mapman id Description
12.5.2.2 Chromatin organisation.DNA methylation.RNA-independent DNA methylation.DNA methyltransferase (MET)