Gene: Os03g0798300
General Information
Structural Information
- Species Oryza sativa ssp. japonica
- Gene Identifier Os03g0798300
- Transcript Identifier Os03t0798300-04
- Gene Type Coding gene
- Location chr03 : 33274630-33281026 : positive
Gene Family Information
- ID HOM05D000572
- #Genes/#Species 968/100
- Phylogenetic origin
- ID ORTHO05D002399
- #Genes/#Species 291/94
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Os03t0798300-04
- MSU-ID LOC_Os03g58400.1
- symbol MET1A
- symbol OsMET1-1
- symbol OsMET1a
- name DNA methyltransferase 1-1
- uniprot Q7Y1I7
Descriptions
- Description DNA methyltransferase, Maintenance of methylation, Gene silencing
- Description DNA methyltransferase, Maintenance of CpG methylation after DNA replication
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0010069 | ISO | PLAZA Integrative Orthology | zygote asymmetric cytokinesis in embryo sac | AT5G49160 |
| GO:0009910 | ISO | PLAZA Integrative Orthology | negative regulation of flower development | AT5G49160 |
| GO:0006821 | ISO | PLAZA Homology (enrichment) | chloride transport | HOM05D000572 |
| GO:0009835 | ISO | PLAZA Integrative Orthology | fruit ripening | Solyc11g030600.3 |
| GO:0009793 | ISO | PLAZA Integrative Orthology | embryo development ending in seed dormancy | AT4G13610 |
| GO:0055085 | ISO | PLAZA Homology (enrichment) | transmembrane transport | HOM05D000572 |
| GO:0009836 | ISO | PLAZA Integrative Orthology | fruit ripening, climacteric | Solyc11g030600.3 |
| GO:0006349 | ISO | PLAZA Integrative Orthology | regulation of gene expression by genetic imprinting | AT5G49160 |
| GO:0009294 | ISO | PLAZA Integrative Orthology | DNA mediated transformation | AT4G14140 |
| GO:0090116 | IEA | GOA Database | C-5 methylation of cytosine | |
| GO:0090116 | IEA | InterPro | C-5 methylation of cytosine | |
| GO:0016458 | IMP | GOA Database | gene silencing | |
| GO:0010424 | ISS | GOA Database | DNA methylation on cytosine within a CG sequence | |
| GO:0010216 | ISS | GOA Database | maintenance of DNA methylation | |
| GO:0032259 | IEA | GOA Database | methylation |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003886 | IEA | GOA Database | DNA (cytosine-5-)-methyltransferase activity | |
| GO:0003886 | IEA | InterPro | DNA (cytosine-5-)-methyltransferase activity | |
| GO:0005247 | ISO | PLAZA Homology (enrichment) | voltage-gated chloride channel activity | HOM05D000572 |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT5G49160 |
| GO:0008168 | IEA | GOA Database | methyltransferase activity | |
| GO:0008168 | IEA | InterPro | methyltransferase activity | |
| GO:0003682 | IEA | GOA Database | chromatin binding | |
| GO:0003682 | IEA | InterPro | chromatin binding | |
| GO:0016740 | IEA | GOA Database | transferase activity | |
| GO:0003677 | IEA | GOA Database | DNA binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016020 | ISO | PLAZA Homology (enrichment) | membrane | HOM05D000572 |
| GO:0005634 | IBA IEA | GOA Database | nucleus | |
| GO:0005634 | IEA | InterPro | nucleus |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR001025 | Bromo adjacent homology (BAH) domain |
| IPR001525 | C-5 cytosine methyltransferase |
| IPR017198 | DNA (cytosine-5)-methyltransferase 1-like |
| IPR022702 | DNA (cytosine-5)-methyltransferase 1, replication foci domain |
| IPR029063 | S-adenosyl-L-methionine-dependent methyltransferase |
| IPR043151 | Bromo adjacent homology (BAH) domain superfamily |
| Mapman id | Description |
|---|---|
| 12.5.2.2 | Chromatin organisation.DNA methylation.RNA-independent DNA methylation.DNA methyltransferase (MET) |