Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p053680 Quercus lobata HOM05D003289 ORTHO05D004594 2.1e-94 349.0 169 100.0
QL01p013239 Quercus lobata HOM05D003289 ORTHO05D004594 4.8e-83 311.2 156 96.2
QL02p000127 Quercus lobata HOM05D003289 ORTHO05D004594 1.8e-82 309.3 156 95.5
QL12p004084 Quercus lobata HOM05D000176 ORTHO05D000106 5.0e-80 301.2 150 96.7
QL07p004315 Quercus lobata HOM05D000176 ORTHO05D000106 8.5e-80 300.4 150 96.7
QL93p0107_0380 Quercus lobata HOM05D000370 ORTHO05D001335 2.1e-78 295.8 150 94.7
CiPaw.13G138900 Carya illinoinensis HOM05D003289 ORTHO05D004594 1.8e-77 292.7 156 89.7
Haze_23425 Corylus avellana HOM05D003289 ORTHO05D004594 1.8e-77 292.7 157 89.8
Ciclev10027662m.g Citrus clementina HOM05D003289 ORTHO05D004594 2.3e-77 292.4 156 87.2
RcHm_v2.0_Chr5g0054631 Rosa chinensis HOM05D003289 ORTHO05D004594 2.5e-76 288.9 156 88.5
Atru.chr3.3336 Acer truncatum HOM05D003289 ORTHO05D004594 4.3e-76 288.1 156 87.2
FAN16G3075 Fragaria x ananassa HOM05D003289 ORTHO05D004594 4.3e-76 288.1 156 87.2
Potri.004G185700 Populus trichocarpa HOM05D003289 ORTHO05D004594 4.3e-76 288.1 156 87.2
Actinidia07230 Actinidia chinensis HOM05D003289 ORTHO05D004594 9.7e-76 287.0 156 86.5
Prupe.6G124200 Prunus persica HOM05D003289 ORTHO05D004594 9.7e-76 287.0 156 86.5
Thecc.09G288000 Theobroma cacao HOM05D003289 ORTHO05D004594 4.8e-75 284.6 156 87.2
FAN21G1989 Fragaria x ananassa HOM05D003289 ORTHO05D004594 8.2e-75 283.9 156 85.9
Rhsim13G0107600 Rhododendron simsii HOM05D003289 ORTHO05D004594 1.1e-74 283.5 156 85.3
Sabra04G0125000 Salix brachista HOM05D003289 ORTHO05D004594 1.1e-74 283.5 156 85.9
MD03G1139200 Malus domestica HOM05D003289 ORTHO05D004594 1.4e-74 283.1 156 87.2
MD11G1160700 Malus domestica HOM05D003289 ORTHO05D004594 1.4e-74 283.1 156 87.2
Nn2g14071 Nelumbo nucifera HOM05D003289 ORTHO05D004594 1.4e-74 283.1 156 85.3
FvH4_3g29570 Fragaria vesca HOM05D003289 ORTHO05D004594 2.4e-74 282.3 156 85.3
FAN11G3202 Fragaria x ananassa HOM05D003289 ORTHO05D004594 2.4e-74 282.3 156 85.3
TAR636G3131 Trochodendron aralioides HOM05D003289 ORTHO05D004594 6.9e-74 280.8 156 85.3
Hund20868 Selenicereus undatus HOM05D003289 ORTHO05D004594 9.1e-74 280.4 156 84.0
Duzib168G1226 Durio zibethinus HOM05D003289 ORTHO05D004594 1.2e-73 280.0 156 85.9
Gorai.009G087200 Gossypium raimondii HOM05D003289 ORTHO05D004594 1.2e-73 280.0 156 85.9
Hma1.2p1_0305F.1_g119455 Hydrangea macrophylla HOM05D003289 ORTHO05D004594 1.2e-73 280.0 156 84.0
CSS0049320 Camellia sinensis var. sinensis HOM05D003289 ORTHO05D004594 1.5e-73 279.6 156 84.6
COL.COLO4_19937 Corchorus olitorius HOM05D003289 ORTHO05D004594 1.5e-73 279.6 156 86.5
Manes.04G006100 Manihot esculenta HOM05D003289 ORTHO05D004594 3.4e-73 278.5 156 84.0
Gohir.A05G082500 Gossypium hirsutum HOM05D003289 ORTHO05D004594 5.9e-73 277.7 156 85.3
arahy.Tifrunner.gnm1.ann1.F25EMM Arachis hypogaea HOM05D003289 ORTHO05D004594 1.0e-72 276.9 156 84.0
arahy.Tifrunner.gnm1.ann1.U78W58 Arachis hypogaea HOM05D003289 ORTHO05D004594 1.0e-72 276.9 156 84.0
Ah.08g215950 Amaranthus hybridus HOM05D003289 ORTHO05D004594 1.3e-72 276.6 157 83.4
PSO384G0460 Papaver somniferum HOM05D003289 ORTHO05D004594 1.3e-72 276.6 156 82.7
PSO425G0048 Papaver somniferum HOM05D003289 ORTHO05D004594 1.7e-72 276.2 156 83.3
AUR62009793 Chenopodium quinoa HOM05D003289 ORTHO05D004594 2.2e-72 275.8 156 83.3
AUR62039240 Chenopodium quinoa HOM05D003289 ORTHO05D004594 8.5e-72 273.9 156 82.7
Lj2C988G5 Lonicera japonica HOM05D003289 ORTHO05D004594 8.5e-72 273.9 156 82.1
Peaxi162Scf00544g00922 Petunia axillaris HOM05D003289 ORTHO05D004594 1.1e-71 273.5 156 82.7
Ca_19261_v3 Cicer arietinum L. HOM05D003289 ORTHO05D004594 1.4e-71 273.1 156 82.1
EL10Ac7g15792 Beta vulgaris HOM05D003289 ORTHO05D004594 1.9e-71 272.7 156 82.1
Eucgr.B03882 Eucalyptus grandis HOM05D003289 ORTHO05D004594 1.9e-71 272.7 156 82.1
Lalb_Chr19g0136661 Lupinus albus HOM05D003289 ORTHO05D004594 1.9e-71 272.7 156 81.4
Sopen11g026820 Solanum pennellii HOM05D003289 ORTHO05D004594 1.9e-71 272.7 156 82.7
ClCG02G022050 Citrullus lanatus HOM05D003289 ORTHO05D004594 2.5e-71 272.3 156 82.1
MELO3C021434.2 Cucumis melo HOM05D003289 ORTHO05D004594 3.2e-71 271.9 156 81.4
PGR102G2277 Punica granatum HOM05D003289 ORTHO05D004594 4.2e-71 271.6 156 82.7
Solyc11g067110.2 Solanum lycopersicum HOM05D003289 ORTHO05D004594 4.2e-71 271.6 156 82.1
CAN.G644.7 Capsicum annuum HOM05D003289 ORTHO05D004594 5.5e-71 271.2 156 81.4
AL1G18660 Arabidopsis lyrata HOM05D003289 ORTHO05D004594 7.2e-71 270.8 156 83.3
AT1G08260 Arabidopsis thaliana HOM05D003289 ORTHO05D004594 7.2e-71 270.8 156 83.3
CsaV3_6G014890 Cucumis sativus L. HOM05D003289 ORTHO05D004594 7.2e-71 270.8 156 80.8
Cpa.g.sc32.133 Carica papaya HOM05D003289 ORTHO05D004594 1.2e-70 270.0 155 81.9
Oeu031488.2 Olea europaea HOM05D003289 ORTHO05D004594 1.2e-70 270.0 156 80.8
MSTRG.17714 Avicennia marina HOM05D003289 ORTHO05D004594 1.6e-70 269.6 156 80.1
SalBow3G0618 Salvia bowleyana HOM05D003289 ORTHO05D004594 1.6e-70 269.6 156 80.1
THA.LOC104826411 Tarenaya hassleriana HOM05D003289 ORTHO05D004594 1.6e-70 269.6 156 82.1
Aqoxy16s008 Aquilegia oxysepala HOM05D003289 ORTHO05D004594 2.7e-70 268.9 157 82.2
Lsat_1_v5_gn_6_39380 Lactuca sativa HOM05D003289 ORTHO05D004594 2.7e-70 268.9 156 81.4
CANSAT54G1671 Cannabis sativa HOM05D003289 ORTHO05D004594 4.7e-70 268.1 156 82.7
Thhalv10006524m.g Eutrema salsugineum HOM05D003289 ORTHO05D004594 4.7e-70 268.1 156 82.1
Sed0008797 Sechium edule HOM05D003289 ORTHO05D004594 4.7e-70 268.1 156 82.1
SGA_v2.0_scaffold102G29919 Striga asiatica HOM05D003289 ORTHO05D004594 4.7e-70 268.1 156 79.5
CAN.G1177.10 Capsicum annuum HOM05D003289 ORTHO05D004594 6.1e-70 267.7 156 80.8
Cc01_g09530 Coffea canephora HOM05D003289 ORTHO05D004594 1.4e-69 266.5 156 79.5
SHI18830 Sapria himalayana HOM05D003289 ORTHO05D004594 1.4e-69 266.5 156 77.6
CARHR008100 Cardamine hirsuta HOM05D003289 ORTHO05D004594 2.3e-69 265.8 156 82.1
Lj3g0000987 Lotus japonicus HOM05D003289 ORTHO05D004594 3.0e-69 265.4 157 79.6
unitig_22.g6642 Utricularia gibba HOM05D003289 ORTHO05D004594 3.0e-69 265.4 158 78.5
Carub.0001s0761 Capsella rubella HOM05D003289 ORTHO05D004594 3.9e-69 265.0 156 80.8
Psat7g189880 Pisum sativum HOM05D003289 ORTHO05D004594 6.7e-69 264.2 156 78.8
AL4G20650 Arabidopsis lyrata HOM05D003289 ORTHO05D004594 8.8e-69 263.8 156 80.8
AT2G27120 Arabidopsis thaliana HOM05D003289 ORTHO05D004594 4.4e-68 261.5 158 78.5
HPP92_025278 Vanilla planifolia HOM05D003289 ORTHO05D004594 4.4e-68 261.5 156 79.5
ECA233G3796 Erigeron canadensis HOM05D003289 ORTHO05D004594 5.7e-68 261.2 156 78.8
Medtr4g054980 Medicago truncatula HOM05D003289 ORTHO05D004594 5.7e-68 261.2 156 78.2
AL4G20810 Arabidopsis lyrata HOM05D003289 ORTHO05D004594 9.7e-68 260.4 156 80.1
Os02g0511900 Oryza sativa ssp. japonica HOM05D003289 ORTHO05D004594 1.3e-67 260.0 156 76.3
Lsat_1_v5_gn_6_39840 Lactuca sativa HOM05D003289 ORTHO05D004594 1.7e-67 259.6 156 78.8
Sp1g06890 Schrenkiella parvula HOM05D003289 ORTHO05D004594 1.7e-67 259.6 156 79.5
TPR.G15595 Trifolium pratense HOM05D003289 ORTHO05D004594 1.7e-67 259.6 156 78.2
GSVIVG01031365001 Vitis vinifera HOM05D003289 ORTHO05D004594 1.7e-67 259.6 166 77.7
Sc21g0007220 Simmondsia chinensis HOM05D003289 ORTHO05D004594 6.3e-67 257.7 156 76.9
VMungo1127G1826 Vigna mungo HOM05D003289 ORTHO05D004594 8.2e-67 257.3 156 76.9
Nitab4.5_0003532g0040 Nicotiana tabacum HOM05D003289 ORTHO05D004594 1.4e-66 256.5 172 72.7
A06p05280 Brassica napus HOM05D003289 ORTHO05D004594 1.8e-66 256.1 156 78.8
Aa31LG2G19310 Aethionema arabicum HOM05D003289 ORTHO05D004594 2.4e-66 255.8 156 77.6
BolC5t29391H Brassica oleracea HOM05D003289 ORTHO05D004594 2.4e-66 255.8 156 78.2
C05p06350 Brassica napus HOM05D003289 ORTHO05D004594 3.1e-66 255.4 156 77.6
Glyma.12G087000 Glycine max HOM05D003289 ORTHO05D004594 3.1e-66 255.4 157 77.7
BraA06t23736Z Brassica rapa HOM05D003289 ORTHO05D004594 4.1e-66 255.0 156 78.2
HanXRQChr05g0145141 Helianthus annuus HOM05D003289 ORTHO05D004594 4.1e-66 255.0 157 78.3
CDE02G3768 Ceratophyllum demersum HOM05D003289 ORTHO05D004594 1.5e-65 253.1 156 75.0
Nitab4.5_0004240g0050 Nicotiana tabacum HOM05D003289 ORTHO05D004594 2.0e-65 252.7 172 72.1
Phvul.011G091900 Phaseolus vulgaris HOM05D003289 ORTHO05D004594 2.0e-65 252.7 156 75.0
QL09p040364 Quercus lobata HOM05D000370 ORTHO05D001335 7.7e-65 250.8 150 86.0
SEGI_26591 Sequoiadendron giganteum HOM05D003289 ORTHO05D004594 2.9e-64 248.8 158 74.1
Zm00001eb241860 Zea mays HOM05D003289 ORTHO05D004594 5.0e-64 248.1 156 73.7
Gohir.D05G085400 Gossypium hirsutum HOM05D003289 ORTHO05D004594 1.6e-62 243.0 134 86.6
ATR0820G092 Amborella trichopoda HOM05D003289 ORTHO05D004594 3.6e-62 241.9 156 73.7
Glyma.11G237700 Glycine max HOM05D003289 ORTHO05D004594 2.3e-61 239.2 187 65.2
Pp3c13_4500 Physcomitrium patens HOM05D003289 ORTHO05D004594 6.3e-59 231.1 159 69.8
MBI15_g14875_MAGBIO Magnolia biondii HOM05D003289 ORTHO05D004594 1.6e-57 226.5 116 90.5
AagrBONN_evm.TU.Sc2ySwM_340.389 Anthoceros agrestis HOM05D003289 ORTHO05D004594 8.5e-56 220.7 158 67.1
SMO144G0205 Selaginella moellendorffii HOM05D003289 ORTHO05D004594 3.2e-55 218.8 161 64.6
Mapoly0006s0290 Marchantia polymorpha HOM05D003289 ORTHO05D004594 4.0e-53 211.8 161 62.1
CARHR038410 Cardamine hirsuta HOM05D003289 ORTHO05D004594 3.3e-52 208.8 144 73.6
MBI15_g40425_MAGBIO Magnolia biondii HOM05D003289 ORTHO05D004594 2.8e-51 205.7 157 67.5
vmacro03295 Vaccinium macrocarpon HOM05D003289 ORTHO05D004594 8.3e-51 204.1 102 91.2
CBR_g8395 Chara braunii HOM05D003289 ORTHO05D004594 1.7e-48 196.4 151 63.6
MELO3C002892.2 Cucumis melo HOM05D003289 ORTHO05D004594 5.5e-47 191.4 100 87.0
DCAR_012181 Daucus carota HOM05D003289 ORTHO05D004594 3.6e-46 188.7 103 84.5
MCO02G508 Micromonas commoda HOM05D003289 ORTHO05D004594 7.5e-44 181.0 181 49.2
HanXRQChr09g0249461 Helianthus annuus HOM05D003289 ORTHO05D004594 3.7e-43 178.7 95 86.3
Cfa025881 Carpinus fangiana HOM05D003289 ORTHO05D004594 2.4e-34 149.4 170 44.7
PRCOL_00004747 Prasinoderma coloniale HOM05D003289 ORTHO05D004594 5.4e-34 148.3 161 46.6
Cre03.g179961 Chlamydomonas reinhardtii HOM05D003289 ORTHO05D004594 1.6e-33 146.7 205 39.0
QL05p087728 Quercus lobata HOM05D000176 ORTHO05D000106 4.7e-22 108.6 68 80.9
QL08p003473 Quercus lobata HOM05D000176 ORTHO05D005465 1.4e-21 107.1 68 79.4
Aa31LG1G200 Aethionema arabicum HOM05D003289 ORTHO05D004594 3.1e-13 79.3 52 71.2


User provided reference genes

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