Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat2g071520 Pisum sativum HOM05D001674 ORTHO05D005257 1.5e-65 252.7 123 100.0
Psat0s1206g0200 Pisum sativum HOM05D001674 ORTHO05D005257 2.0e-14 82.8 42 97.6
TPR.G12547 Trifolium pratense HOM05D001674 ORTHO05D005257 2.6e-14 82.4 42 95.2
Ca_21367_v3 Cicer arietinum L. HOM05D001674 ORTHO05D005257 4.5e-14 81.6 42 95.2
Medtr4g124090 Medicago truncatula HOM05D001674 ORTHO05D005257 4.5e-14 81.6 42 95.2
FvH4_4g21690 Fragaria vesca HOM05D001674 ORTHO05D005257 5.9e-14 81.3 42 95.2
FAN12G1186 Fragaria x ananassa HOM05D001674 ORTHO05D005257 5.9e-14 81.3 42 95.2
FAN17G2195 Fragaria x ananassa HOM05D001674 ORTHO05D005257 5.9e-14 81.3 42 95.2
MD13G1156900 Malus domestica HOM05D001674 ORTHO05D005257 5.9e-14 81.3 42 95.2
MD16G1134000 Malus domestica HOM05D001674 ORTHO05D005257 5.9e-14 81.3 42 95.2
Prupe.1G103200 Prunus persica HOM05D001674 ORTHO05D005257 5.9e-14 81.3 42 95.2
Lsat_1_v5_gn_6_118341 Lactuca sativa HOM05D001674 ORTHO05D005257 1.0e-13 80.5 42 95.2
Phvul.003G123100 Phaseolus vulgaris HOM05D001674 ORTHO05D005257 1.0e-13 80.5 42 92.9
RcHm_v2.0_Chr4g0427901 Rosa chinensis HOM05D001674 ORTHO05D005257 1.3e-13 80.1 42 92.9
arahy.Tifrunner.gnm1.ann1.GZJK2B Arachis hypogaea HOM05D001674 ORTHO05D005257 2.2e-13 79.3 42 92.9
arahy.Tifrunner.gnm1.ann1.R8ERLJ Arachis hypogaea HOM05D001674 ORTHO05D005257 2.2e-13 79.3 42 92.9
Lj4g0019577 Lotus japonicus HOM05D001674 ORTHO05D005257 2.2e-13 79.3 42 92.9
Lalb_Chr13g0299021 Lupinus albus HOM05D001674 ORTHO05D005257 2.2e-13 79.3 42 92.9
VMungo1215G3338 Vigna mungo HOM05D001674 ORTHO05D005257 2.2e-13 79.3 42 92.9
Aqoxy2G02487 Aquilegia oxysepala HOM05D001674 ORTHO05D005257 2.9e-13 79.0 42 92.9
EL10Ac3g06234 Beta vulgaris HOM05D001674 ORTHO05D005257 2.9e-13 79.0 42 92.9
CSS0042912 Camellia sinensis var. sinensis HOM05D001674 ORTHO05D005257 2.9e-13 79.0 42 92.9
Haze_00754 Corylus avellana HOM05D001674 ORTHO05D005257 2.9e-13 79.0 42 92.9
HanXRQChr05g0148951 Helianthus annuus HOM05D001674 ORTHO05D005257 2.9e-13 79.0 42 92.9
Rhsim04G0249200 Rhododendron simsii HOM05D001674 ORTHO05D005257 2.9e-13 79.0 42 92.9
Manes.03G212800 Manihot esculenta HOM05D001674 ORTHO05D005257 5.0e-13 78.2 42 90.5
Sp1g35260 Schrenkiella parvula HOM05D001674 ORTHO05D005257 5.0e-13 78.2 42 92.9
Cfa015741 Carpinus fangiana HOM05D001674 ORTHO05D005257 6.5e-13 77.8 42 90.5
ClCG05G006880 Citrullus lanatus HOM05D001674 ORTHO05D005257 6.5e-13 77.8 42 90.5
ECA246G1105 Erigeron canadensis HOM05D001674 ORTHO05D005257 6.5e-13 77.8 42 90.5
TAR362G1045 Trochodendron aralioides HOM05D001674 ORTHO05D005257 6.5e-13 77.8 42 90.5
Zm00001eb328680 Zea mays HOM05D001674 ORTHO05D005257 6.5e-13 77.8 45 84.4
Aa31LG10G5460 Aethionema arabicum HOM05D001674 ORTHO05D005257 1.1e-12 77.0 42 90.5
BcaB02g11412 Brassica carinata HOM05D001674 ORTHO05D005257 1.4e-12 76.6 42 90.5
BcaC05g27587 Brassica carinata HOM05D001674 ORTHO05D005257 1.4e-12 76.6 42 90.5
A05p21130 Brassica napus HOM05D001674 ORTHO05D005257 1.4e-12 76.6 42 90.5
C05p35670 Brassica napus HOM05D001674 ORTHO05D005257 1.4e-12 76.6 42 90.5
BolC5t32283H Brassica oleracea HOM05D001674 ORTHO05D005257 1.4e-12 76.6 42 90.5
BraA05t21018Z Brassica rapa HOM05D001674 ORTHO05D005257 1.4e-12 76.6 42 90.5
AUR62002539 Chenopodium quinoa HOM05D001674 ORTHO05D005257 1.4e-12 76.6 42 90.5
AUR62023654 Chenopodium quinoa HOM05D001674 ORTHO05D005257 1.4e-12 76.6 42 90.5
Eucgr.H04132 Eucalyptus grandis HOM05D001674 ORTHO05D005257 1.4e-12 76.6 42 88.1
Thhalv10011287m.g Eutrema salsugineum HOM05D001674 ORTHO05D005257 1.4e-12 76.6 42 90.5
MBI19_g30290_MAGBIO Magnolia biondii HOM05D001674 ORTHO05D005257 1.4e-12 76.6 42 90.5
PGR004G0096 Punica granatum HOM05D001674 ORTHO05D005257 1.4e-12 76.6 42 88.1
Ah.07g203550 Amaranthus hybridus HOM05D001674 ORTHO05D005257 1.9e-12 76.3 42 85.7
AL1G54910 Arabidopsis lyrata HOM05D001674 ORTHO05D005257 1.9e-12 76.3 58 69.0
CANSAT78G0587 Cannabis sativa HOM05D001674 ORTHO05D005257 1.9e-12 76.3 42 88.1
Sed0007966 Sechium edule HOM05D001674 ORTHO05D005257 1.9e-12 76.3 42 88.1
Sc25g0001840 Simmondsia chinensis HOM05D001674 ORTHO05D005257 1.9e-12 76.3 42 88.1
Cc03_g00030 Coffea canephora HOM05D001674 ORTHO05D005257 2.5e-12 75.9 42 88.1
Dinv24721 Davidia involucrata HOM05D001674 ORTHO05D005257 2.5e-12 75.9 42 88.1
PSO170G0915 Papaver somniferum HOM05D001674 ORTHO05D005257 2.5e-12 75.9 42 83.3
THA.LOC104802617 Tarenaya hassleriana HOM05D001674 ORTHO05D005257 2.5e-12 75.9 42 88.1
Actinidia18515 Actinidia chinensis HOM05D001674 ORTHO05D005257 3.2e-12 75.5 42 88.1
Ciclev10004488m.g Citrus clementina HOM05D001674 ORTHO05D005257 3.2e-12 75.5 42 85.7
Potri.010G003300 Populus trichocarpa HOM05D001674 ORTHO05D005257 3.2e-12 75.5 42 88.1
GSVIVG01017700001 Vitis vinifera HOM05D001674 ORTHO05D005257 3.2e-12 75.5 42 88.1
Atru.chr4.3178 Acer truncatum HOM05D001674 ORTHO05D005257 4.2e-12 75.1 42 88.1
CARHR037930 Cardamine hirsuta HOM05D001674 ORTHO05D005257 4.2e-12 75.1 53 71.7
MELO3C006754.2 Cucumis melo HOM05D001674 ORTHO05D005257 4.2e-12 75.1 42 88.1
Glyma.13G118200 Glycine max HOM05D001674 ORTHO05D005257 4.2e-12 75.1 42 88.1
Lj3C842G5 Lonicera japonica HOM05D001674 ORTHO05D005257 4.2e-12 75.1 42 85.7
TWI77G0300 Tripterygium wilfordii HOM05D001674 ORTHO05D005257 4.2e-12 75.1 40 92.5
QL06p014511 Quercus lobata HOM05D001674 ORTHO05D005257 5.5e-12 74.7 42 85.7
CiPaw.01G127900 Carya illinoinensis HOM05D001674 ORTHO05D005257 9.4e-12 73.9 42 85.7
CsaV3_3G015550 Cucumis sativus L. HOM05D001674 ORTHO05D005257 9.4e-12 73.9 42 88.1
Glyma.17G041700 Glycine max HOM05D001674 ORTHO05D005257 9.4e-12 73.9 42 85.7
Oeu002203.3 Olea europaea HOM05D001674 ORTHO05D005257 1.2e-11 73.6 42 85.7
Os07g0636200 Oryza sativa ssp. japonica HOM05D001674 ORTHO05D005257 1.2e-11 73.6 42 83.3
PSO445G0012 Papaver somniferum HOM05D001674 ORTHO05D005257 1.2e-11 73.6 42 81.0
AT1G48310 Arabidopsis thaliana HOM05D001674 ORTHO05D005257 1.6e-11 73.2 53 71.7
DCAR_026929 Daucus carota HOM05D001674 ORTHO05D005257 2.1e-11 72.8 42 83.3
Gohir.A06G112800 Gossypium hirsutum HOM05D001674 ORTHO05D005257 2.1e-11 72.8 42 83.3
Duzib235G1161 Durio zibethinus HOM05D001674 ORTHO05D005257 4.7e-11 71.6 42 81.0
Nitab4.5_0000978g0050 Nicotiana tabacum HOM05D001674 ORTHO05D005257 4.7e-11 71.6 42 83.3
Nitab4.5_0012375g0010 Nicotiana tabacum HOM05D001674 ORTHO05D005257 4.7e-11 71.6 42 83.3
Peaxi162Scf00323g00935 Petunia axillaris HOM05D001674 ORTHO05D005257 4.7e-11 71.6 42 83.3
Thecc.05G189900 Theobroma cacao HOM05D001674 ORTHO05D005257 4.7e-11 71.6 42 81.0
Gohir.D06G117500 Gossypium hirsutum HOM05D001674 ORTHO05D005257 6.1e-11 71.2 42 81.0
Gorai.010G135100 Gossypium raimondii HOM05D001674 ORTHO05D005257 6.1e-11 71.2 42 81.0
Carub.0001s3744 Capsella rubella HOM05D001674 ORTHO05D005257 7.9e-11 70.9 42 81.0
CAN.G484.96 Capsicum annuum HOM05D001674 ORTHO05D005257 1.4e-10 70.1 42 81.0
ATR0796G053 Amborella trichopoda HOM05D001674 ORTHO05D005257 1.8e-10 69.7 42 78.6
Migut.N03098 Erythranthe guttata HOM05D001674 ORTHO05D005257 1.8e-10 69.7 42 78.6
SalBow6G2708 Salvia bowleyana HOM05D001674 ORTHO05D005257 1.8e-10 69.7 42 81.0
Solyc12g098860.2 Solanum lycopersicum HOM05D001674 ORTHO05D005257 5.1e-10 68.2 42 78.6
Sopen12g033610 Solanum pennellii HOM05D001674 ORTHO05D005257 5.1e-10 68.2 42 78.6
MSTRG.22009 Avicennia marina HOM05D001674 ORTHO05D005257 8.8e-10 67.4 40 80.0
unitig_8.g3632 Utricularia gibba HOM05D001674 ORTHO05D005257 1.5e-09 66.6 42 76.2
MD13G1138200 Malus domestica HOM05D000021 ORTHO05D005257 4.4e-09 65.1 33 97.0
Cpa.g.sc146.11 Carica papaya HOM05D001674 ORTHO05D005257 7.4e-09 64.3 34 94.1
SGA_v2.0_scaffold322G48597 Striga asiatica HOM05D001674 ORTHO05D005257 1.3e-08 63.5 58 62.1
CDE11G0774 Ceratophyllum demersum HOM05D001674 ORTHO05D005257 1.7e-08 63.2 34 91.2
COL.COLO4_28308 Corchorus olitorius HOM05D001674 ORTHO05D005257 3.7e-08 62.0 34 88.2
vmacro08016 Vaccinium macrocarpon HOM05D001674 ORTHO05D005257 6.3e-08 61.2 33 90.9
CBR_g29672 Chara braunii HOM05D001674 ORTHO05D005257 1.8e-07 59.7 42 69.0
Pp3c16_16990 Physcomitrium patens HOM05D001674 ORTHO05D005257 2.4e-07 59.3 41 73.2
Mapoly0113s0030 Marchantia polymorpha HOM05D000104 ORTHO05D005257 5.3e-07 58.2 52 55.8
SMO364G0824 Selaginella moellendorffii HOM05D001674 ORTHO05D005257 9.1e-07 57.4 38 76.3


User provided reference genes

Program Settings