Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.6G214800 Prunus persica HOM05D006570 ORTHO05D008193 3.3e-240 834.7 454 100.0
RcHm_v2.0_Chr5g0052821 Rosa chinensis HOM05D006570 ORTHO05D008193 6.0e-197 691.0 413 83.3
MD15G1141300 Malus domestica HOM05D006570 ORTHO05D008193 2.8e-194 682.2 407 85.5
FvH4_3g28500 Fragaria vesca HOM05D006570 ORTHO05D008193 6.4e-191 671.0 404 81.4
FAN21G3910 Fragaria x ananassa HOM05D006570 ORTHO05D008193 1.5e-187 659.8 405 80.7
CANSAT01G0840 Cannabis sativa HOM05D006570 ORTHO05D008193 1.3e-170 603.6 418 70.8
Haze_04512 Corylus avellana HOM05D006570 ORTHO05D008193 1.6e-170 603.2 416 71.4
Cfa006298 Carpinus fangiana HOM05D006570 ORTHO05D008193 6.9e-169 597.8 419 70.2
TWI18G1431 Tripterygium wilfordii HOM05D006570 ORTHO05D008193 1.4e-166 590.1 420 69.8
Potri.014G198000 Populus trichocarpa HOM05D006570 ORTHO05D008193 1.9e-166 589.7 430 67.9
Atru.chr6.3468 Acer truncatum HOM05D006570 ORTHO05D008193 5.1e-164 581.6 415 71.1
Ciclev10015195m.g Citrus clementina HOM05D006570 ORTHO05D008193 8.7e-164 580.9 412 69.9
Manes.13G058200 Manihot esculenta HOM05D006570 ORTHO05D008193 4.3e-163 578.6 418 69.1
Dinv28772 Davidia involucrata HOM05D006570 ORTHO05D008193 2.1e-162 576.2 415 70.8
TAR362G0032 Trochodendron aralioides HOM05D006570 ORTHO05D008193 3.1e-161 572.4 411 69.6
CiPaw.07G077200 Carya illinoinensis HOM05D006570 ORTHO05D008193 9.0e-161 570.9 423 66.9
Thecc.01G203700 Theobroma cacao HOM05D006570 ORTHO05D008193 1.1e-158 563.9 423 68.1
Lj3g0023743 Lotus japonicus HOM05D006570 ORTHO05D008193 1.9e-158 563.1 417 67.1
Lj2A1109T67 Lonicera japonica HOM05D006570 ORTHO05D008193 3.2e-158 562.4 421 66.5
Ca_23570_v3 Cicer arietinum L. HOM05D006570 ORTHO05D008193 5.5e-158 561.6 416 67.1
Ca_23579_v3 Cicer arietinum L. HOM05D006570 ORTHO05D008193 5.5e-158 561.6 416 67.1
Duzib133G0843 Durio zibethinus HOM05D006570 ORTHO05D008193 7.1e-158 561.2 419 68.5
Glyma.07G059700 Glycine max HOM05D006570 ORTHO05D008193 1.6e-157 560.1 414 68.6
Cpa.g.sc8.9 Carica papaya HOM05D006570 ORTHO05D008193 7.9e-157 557.8 430 66.0
Gohir.D07G093500 Gossypium hirsutum HOM05D006570 ORTHO05D008193 1.8e-156 556.6 422 67.1
Gorai.001G100200 Gossypium raimondii HOM05D006570 ORTHO05D008193 1.8e-156 556.6 422 67.1
Gohir.A07G088500 Gossypium hirsutum HOM05D006570 ORTHO05D008193 5.1e-156 555.1 421 67.7
vmacro02851 Vaccinium macrocarpon HOM05D006570 ORTHO05D008193 5.1e-156 555.1 419 67.5
TPR.G5123 Trifolium pratense HOM05D006570 ORTHO05D008193 6.7e-156 554.7 415 66.0
GSVIVG01004124001 Vitis vinifera HOM05D006570 ORTHO05D008193 6.7e-156 554.7 423 66.2
Phvul.010G109900 Phaseolus vulgaris HOM05D006570 ORTHO05D008193 1.3e-154 550.4 419 66.1
COL.COLO4_19720 Corchorus olitorius HOM05D006570 ORTHO05D008193 4.8e-154 548.5 404 67.8
VMungo0331G0798 Vigna mungo HOM05D006570 ORTHO05D008193 8.2e-154 547.7 421 66.5
Migut.D00755 Erythranthe guttata HOM05D006570 ORTHO05D008193 1.4e-153 547.0 412 67.2
Medtr8g028105 Medicago truncatula HOM05D006570 ORTHO05D008193 3.1e-153 545.8 413 65.9
Actinidia11648 Actinidia chinensis HOM05D006570 ORTHO05D008193 4.1e-153 545.4 412 67.2
Ah.11g050650 Amaranthus hybridus HOM05D006570 ORTHO05D008193 5.3e-153 545.0 409 66.3
Lalb_Chr10g0100201 Lupinus albus HOM05D006570 ORTHO05D008193 5.3e-153 545.0 416 65.6
Oeu020442.2 Olea europaea HOM05D006570 ORTHO05D008193 9.0e-153 544.3 424 66.0
Solyc09g018850.3 Solanum lycopersicum HOM05D006570 ORTHO05D008193 4.5e-152 542.0 409 66.3
Aa31sc565G50 Aethionema arabicum HOM05D006570 ORTHO05D008193 7.6e-152 541.2 419 64.7
Cc01_g15710 Coffea canephora HOM05D006570 ORTHO05D008193 7.6e-152 541.2 426 65.3
Hma1.2p1_0834F.1_g225720 Hydrangea macrophylla HOM05D006570 ORTHO05D008193 7.6e-152 541.2 399 68.9
Sopen09g012610 Solanum pennellii HOM05D006570 ORTHO05D008193 7.6e-152 541.2 409 66.0
arahy.Tifrunner.gnm1.ann1.L2UBUE Arachis hypogaea HOM05D006570 ORTHO05D008193 1.7e-151 540.0 430 63.5
Sabra14G0132400 Salix brachista HOM05D006570 ORTHO05D008193 5.0e-151 538.5 510 57.1
PGSC0003DMG400020287 Solanum tuberosum HOM05D006570 ORTHO05D008193 1.1e-150 537.3 410 65.4
arahy.Tifrunner.gnm1.ann1.N5JW36 Arachis hypogaea HOM05D006570 ORTHO05D008193 4.2e-150 535.4 429 63.6
SalBow6G3933 Salvia bowleyana HOM05D006570 ORTHO05D008193 4.2e-150 535.4 421 63.7
SalBow2G2795 Salvia bowleyana HOM05D006570 ORTHO05D008193 2.7e-149 532.7 421 63.4
CsaV3_6G007600 Cucumis sativus L. HOM05D006570 ORTHO05D008193 7.9e-149 531.2 413 65.6
AL9U11910 Arabidopsis lyrata HOM05D006570 ORTHO05D008193 1.0e-148 530.8 414 64.3
PSO170G2695 Papaver somniferum HOM05D006570 ORTHO05D008193 1.4e-148 530.4 418 63.2
FAN25G2405 Fragaria x ananassa HOM05D006570 ORTHO05D008193 2.5e-147 526.2 513 58.1
Peaxi162Scf12724g00014 Petunia axillaris HOM05D006570 ORTHO05D008193 3.3e-147 525.8 409 63.6
THA.LOC104815379 Tarenaya hassleriana HOM05D006570 ORTHO05D008193 3.3e-147 525.8 419 63.7
Nitab4.5_0005967g0010 Nicotiana tabacum HOM05D006570 ORTHO05D008193 5.7e-147 525.0 418 63.2
Sp7g09050 Schrenkiella parvula HOM05D006570 ORTHO05D008193 9.7e-147 524.2 412 64.1
PGR083G1749 Punica granatum HOM05D006570 ORTHO05D008193 1.7e-146 523.5 424 64.2
A04p09180 Brassica napus HOM05D006570 ORTHO05D008193 2.8e-146 522.7 413 63.4
ClCG06G001630 Citrullus lanatus HOM05D006570 ORTHO05D008193 2.8e-146 522.7 413 65.9
AT4G12740 Arabidopsis thaliana HOM05D006570 ORTHO05D008193 4.8e-146 521.9 407 64.6
BcaB03g16147 Brassica carinata HOM05D006570 ORTHO05D008193 6.3e-146 521.5 413 63.9
Carub.0007s3008 Capsella rubella HOM05D006570 ORTHO05D008193 6.3e-146 521.5 414 63.8
Aqoxy1G01428 Aquilegia oxysepala HOM05D006570 ORTHO05D008193 1.8e-145 520.0 433 61.7
Aqoxy7G03970 Aquilegia oxysepala HOM05D006570 ORTHO05D008193 4.1e-145 518.8 433 61.4
C04p43140 Brassica napus HOM05D006570 ORTHO05D008193 9.1e-145 517.7 408 63.2
HanXRQChr16g0508391 Helianthus annuus HOM05D006570 ORTHO05D008193 9.1e-145 517.7 415 62.7
BcaC02g09469 Brassica carinata HOM05D006570 ORTHO05D008193 1.2e-144 517.3 413 63.0
Thhalv10024575m.g Eutrema salsugineum HOM05D006570 ORTHO05D008193 7.7e-144 514.6 401 64.1
ECA236G3480 Erigeron canadensis HOM05D006570 ORTHO05D008193 2.2e-143 513.1 425 61.9
MBI10_g46813_MAGBIO Magnolia biondii HOM05D006570 ORTHO05D008193 8.5e-143 511.1 415 63.9
EL10Ac5g10565 Beta vulgaris HOM05D006570 ORTHO05D008193 1.2e-141 507.3 397 64.5
CARHR218120 Cardamine hirsuta HOM05D006570 ORTHO05D008193 2.1e-141 506.5 410 63.2
Nitab4.5_0009028g0030 Nicotiana tabacum HOM05D006570 ORTHO05D008193 1.4e-140 503.8 442 60.2
DCAR_012712 Daucus carota HOM05D006570 ORTHO05D008193 2.3e-140 503.1 393 66.4
CAN.G3.13 Capsicum annuum HOM05D006570 ORTHO05D008193 5.7e-139 498.4 367 67.0
BraA04t16613Z Brassica rapa HOM05D006570 ORTHO05D008193 9.7e-139 497.7 428 60.0
BolC4t25891H Brassica oleracea HOM05D006570 ORTHO05D008193 4.8e-138 495.4 421 60.8
Psat4g158840 Pisum sativum HOM05D006570 ORTHO05D008193 6.3e-138 495.0 371 66.6
AUR62028620 Chenopodium quinoa HOM05D006570 ORTHO05D008193 2.4e-137 493.0 415 61.0
Sc05g0001500 Simmondsia chinensis HOM05D006570 ORTHO05D008193 9.1e-137 491.1 443 58.9
AUR62008045 Chenopodium quinoa HOM05D006570 ORTHO05D008193 1.2e-136 490.7 415 61.4
AUR62032342 Chenopodium quinoa HOM05D006570 ORTHO05D008193 1.2e-136 490.7 415 61.4
ATR0743G076 Amborella trichopoda HOM05D006570 ORTHO05D008193 1.7e-135 486.9 402 62.4
CDE09G0147 Ceratophyllum demersum HOM05D006570 ORTHO05D008193 1.9e-134 483.4 415 61.4
HPP92_007590 Vanilla planifolia HOM05D006570 ORTHO05D008193 5.5e-134 481.9 422 61.6
Rhsim13G0056200 Rhododendron simsii HOM05D006570 ORTHO05D008193 6.1e-133 478.4 417 61.2
Hund09495 Selenicereus undatus HOM05D006570 ORTHO05D008193 8.8e-132 474.6 359 64.6
MELO3C022371.2 Cucumis melo HOM05D006570 ORTHO05D008193 7.4e-131 471.5 410 61.5
SHI10196 Sapria himalayana HOM05D006570 ORTHO05D008193 1.7e-127 460.3 408 56.9
Zm00001eb411200 Zea mays HOM05D006570 ORTHO05D008193 1.7e-127 460.3 419 57.5
Lsat_1_v5_gn_8_98640 Lactuca sativa HOM05D006570 ORTHO05D008193 2.1e-125 453.4 411 60.3
Os12g0211400 Oryza sativa ssp. japonica HOM05D006570 ORTHO05D008193 6.1e-125 451.8 405 57.3
Hma1.2p1_0834F.1_g225710 Hydrangea macrophylla HOM05D006570 ORTHO05D008193 6.7e-124 448.4 369 63.7
SEGI_12299 Sequoiadendron giganteum HOM05D006570 ORTHO05D008193 1.0e-119 434.5 441 54.0
Os12g0212100 Oryza sativa ssp. japonica HOM05D006570 ORTHO05D008193 8.3e-114 414.8 358 59.8
Hma1.2p1_1756F.1_g301050 Hydrangea macrophylla HOM05D006570 ORTHO05D008193 3.3e-110 402.9 320 65.6
Eucgr.H00676 Eucalyptus grandis HOM05D006570 ORTHO05D008193 1.7e-106 390.6 298 67.1
unitig_90.g27554 Utricularia gibba HOM05D006570 ORTHO05D008193 1.4e-105 387.5 410 53.4
FAN11G0847 Fragaria x ananassa HOM05D006570 ORTHO05D008193 5.0e-103 379.0 230 78.7
Pp3c18_200 Physcomitrium patens HOM05D006570 ORTHO05D008193 1.4e-100 370.9 454 46.3
MBI10_g40441_MAGBIO Magnolia biondii HOM05D006570 ORTHO05D008193 1.2e-99 367.9 305 62.6
Actinidia23139 Actinidia chinensis HOM05D006570 ORTHO05D008193 4.1e-97 359.4 408 50.5
Mapoly0043s0062 Marchantia polymorpha HOM05D006570 ORTHO05D008193 5.0e-95 352.4 369 51.5
QL01p050877 Quercus lobata HOM05D006570 ORTHO05D008193 8.3e-82 308.5 247 64.8
SMO202G0040 Selaginella moellendorffii HOM05D006570 ORTHO05D008193 1.2e-77 294.7 296 54.1
PRCOL_00001086 Prasinoderma coloniale HOM05D006570 ORTHO05D008193 1.9e-70 270.8 406 41.9
MCO12G048 Micromonas commoda HOM05D006570 ORTHO05D008193 1.1e-68 265.0 464 38.8
GSVIVG01038286001 Vitis vinifera HOM05D006570 ORTHO05D008193 4.0e-60 236.5 188 61.2
CSS0008113 Camellia sinensis var. sinensis HOM05D006570 ORTHO05D008193 1.4e-52 211.5 126 82.5
CSS0032158 Camellia sinensis var. sinensis HOM05D006570 ORTHO05D008193 1.4e-52 211.5 126 82.5
Cre02.g082000 Chlamydomonas reinhardtii HOM05D006570 ORTHO05D008193 2.4e-52 210.7 288 41.3
Ca_29093_v3 Cicer arietinum L. HOM05D006570 ORTHO05D008193 3.2e-41 173.7 212 42.9
QL01p050896 Quercus lobata HOM05D006570 ORTHO05D008193 6.3e-37 159.5 112 67.9
DCAR_012713 Daucus carota HOM05D006570 ORTHO05D008193 1.8e-36 157.9 124 62.1
QL05p014267 Quercus lobata HOM05D006570 ORTHO05D008193 2.5e-30 137.5 190 42.6
CDE02G1275 Ceratophyllum demersum HOM05D006570 ORTHO05D008193 9.7e-30 135.6 110 62.7
QL05p014599 Quercus lobata HOM05D006570 ORTHO05D008193 6.9e-28 129.4 128 56.2
Glyma.16G028601 Glycine max HOM05D006570 ORTHO05D008193 3.6e-24 117.1 98 54.1
CBR_g38520 Chara braunii HOM05D000019 ORTHO05D000048 3.7e-21 107.1 63 74.6
PGR142G0081 Punica granatum HOM05D006570 ORTHO05D008193 1.4e-20 105.1 130 47.7
CBR_g38518 Chara braunii HOM05D000019 ORTHO05D000048 7.7e-11 72.8 152 34.2
Os12g0211301 Oryza sativa ssp. japonica HOM05D006570 ORTHO05D008193 6.8e-07 59.7 64 46.9
Hund03151 Selenicereus undatus HOM05D004358 ORTHO05D004960 2.6e-06 57.8 150 33.3
SMO347G0587 Selaginella moellendorffii HOM05D004358 ORTHO05D004960 9.7e-06 55.8 159 28.9


User provided reference genes

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