Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.3G073900 Prunus persica HOM05D007289 ORTHO05D009215 4.2e-212 741.1 382 100.0
MD17G1197800 Malus domestica HOM05D007289 ORTHO05D009215 1.6e-166 589.7 390 80.5
RcHm_v2.0_Chr2g0137421 Rosa chinensis HOM05D007289 ORTHO05D009215 4.2e-151 538.5 386 75.4
FvH4_6g30910 Fragaria vesca HOM05D007289 ORTHO05D009215 2.2e-144 516.2 380 74.5
FAN02G0535 Fragaria x ananassa HOM05D007289 ORTHO05D009215 2.9e-144 515.8 380 74.5
Dinv30529 Davidia involucrata HOM05D007289 ORTHO05D009215 9.7e-132 474.2 401 66.1
TAR383G0594 Trochodendron aralioides HOM05D007289 ORTHO05D009215 5.3e-130 468.4 398 64.6
Ciclev10025766m.g Citrus clementina HOM05D007289 ORTHO05D009215 7.2e-127 458.0 384 65.1
CSS0039074 Camellia sinensis var. sinensis HOM05D007289 ORTHO05D009215 2.3e-125 453.0 400 63.0
FAN09G0173 Fragaria x ananassa HOM05D007289 ORTHO05D009215 5.1e-125 451.8 346 72.0
VMungo1080G1522 Vigna mungo HOM05D007289 ORTHO05D009215 1.5e-121 440.3 382 61.5
Lalb_Chr14g0373531 Lupinus albus HOM05D007289 ORTHO05D009215 4.5e-121 438.7 372 64.0
vmacro18934 Vaccinium macrocarpon HOM05D007289 ORTHO05D009215 4.5e-121 438.7 396 62.4
Phvul.005G172600 Phaseolus vulgaris HOM05D007289 ORTHO05D009215 7.7e-121 438.0 371 62.5
Potri.001G178100 Populus trichocarpa HOM05D007289 ORTHO05D009215 1.4e-119 433.7 362 63.5
Lj3g0010801 Lotus japonicus HOM05D007289 ORTHO05D009215 3.6e-118 429.1 379 62.0
Atru.chr1.3224 Acer truncatum HOM05D007289 ORTHO05D009215 7.9e-118 427.9 391 61.6
Glyma.13G360800 Glycine max HOM05D007289 ORTHO05D009215 7.9e-118 427.9 379 61.2
CANSAT56G1700 Cannabis sativa HOM05D007289 ORTHO05D009215 1.0e-117 427.6 398 60.8
QL05p025382 Quercus lobata HOM05D007289 ORTHO05D009215 1.0e-117 427.6 395 62.8
Ca_01106_v3 Cicer arietinum L. HOM05D007289 ORTHO05D009215 1.4e-117 427.2 370 60.5
Psat5g299280 Pisum sativum HOM05D007289 ORTHO05D009215 3.9e-117 425.6 371 61.7
Lalb_Chr22g0351171 Lupinus albus HOM05D007289 ORTHO05D009215 3.3e-116 422.5 370 63.2
Manes.04G121300 Manihot esculenta HOM05D007289 ORTHO05D009215 3.3e-116 422.5 386 60.9
Rhsim08G0218600 Rhododendron simsii HOM05D007289 ORTHO05D009215 3.3e-116 422.5 411 57.9
Sabra01G0148500 Salix brachista HOM05D007289 ORTHO05D009215 4.4e-116 422.2 377 60.5
Cfa002049 Carpinus fangiana HOM05D007289 ORTHO05D009215 5.7e-116 421.8 377 63.9
Gohir.A02G122500 Gossypium hirsutum HOM05D007289 ORTHO05D009215 1.3e-115 420.6 379 62.3
Lj9C506T12 Lonicera japonica HOM05D007289 ORTHO05D009215 2.4e-114 416.4 406 59.6
Gorai.002G058300 Gossypium raimondii HOM05D007289 ORTHO05D009215 3.1e-114 416.0 378 61.4
TPR.G37243 Trifolium pratense HOM05D007289 ORTHO05D009215 9.1e-114 414.5 369 60.7
TWI75G1369 Tripterygium wilfordii HOM05D007289 ORTHO05D009215 1.5e-113 413.7 371 63.1
CiPaw.02G152300 Carya illinoinensis HOM05D007289 ORTHO05D009215 3.5e-113 412.5 363 63.6
MELO3C023367.2 Cucumis melo HOM05D007289 ORTHO05D009215 3.5e-113 412.5 380 59.2
Thecc.06G082700 Theobroma cacao HOM05D007289 ORTHO05D009215 8.5e-112 407.9 382 61.5
Sed0021795 Sechium edule HOM05D007289 ORTHO05D009215 1.1e-111 407.5 384 58.1
arahy.Tifrunner.gnm1.ann1.UJ7D22 Arachis hypogaea HOM05D007289 ORTHO05D009215 1.9e-111 406.8 381 57.7
COL.COLO4_30328 Corchorus olitorius HOM05D007289 ORTHO05D009215 3.2e-111 406.0 385 59.7
arahy.Tifrunner.gnm1.ann1.HRS6MU Arachis hypogaea HOM05D007289 ORTHO05D009215 4.2e-111 405.6 383 58.0
CsaV3_7G033000 Cucumis sativus L. HOM05D007289 ORTHO05D009215 1.6e-110 403.7 380 57.9
GSVIVG01017153001 Vitis vinifera HOM05D007289 ORTHO05D009215 1.0e-109 401.0 333 64.6
Aqoxy7G01850 Aquilegia oxysepala HOM05D007289 ORTHO05D009215 2.3e-109 399.8 391 56.0
Medtr2g102430 Medicago truncatula HOM05D007289 ORTHO05D009215 3.0e-109 399.4 362 58.0
PGSC0003DMG400016511 Solanum tuberosum HOM05D007289 ORTHO05D009215 3.9e-109 399.1 382 58.9
MBI04_g26647_MAGBIO Magnolia biondii HOM05D007289 ORTHO05D009215 1.1e-108 397.5 375 57.9
Sc12g0009160 Simmondsia chinensis HOM05D007289 ORTHO05D009215 2.6e-108 396.4 401 57.6
Hund06601 Selenicereus undatus HOM05D007289 ORTHO05D009215 4.8e-107 392.1 393 55.7
Sopen06g025060 Solanum pennellii HOM05D007289 ORTHO05D009215 1.4e-106 390.6 382 58.1
Cc04_g03590 Coffea canephora HOM05D007289 ORTHO05D009215 2.4e-106 389.8 381 57.2
Solyc06g066780.3 Solanum lycopersicum HOM05D007289 ORTHO05D009215 2.4e-106 389.8 382 58.1
Nitab4.5_0002327g0060 Nicotiana tabacum HOM05D007289 ORTHO05D009215 1.2e-105 387.5 382 58.4
PGR102G0666 Punica granatum HOM05D007289 ORTHO05D009215 1.6e-105 387.1 384 59.1
DCAR_016227 Daucus carota HOM05D007289 ORTHO05D009215 8.5e-104 381.3 378 55.3
PSO782G0119 Papaver somniferum HOM05D007289 ORTHO05D009215 1.5e-103 380.6 370 57.8
Thhalv10018735m.g Eutrema salsugineum HOM05D007289 ORTHO05D009215 2.5e-103 379.8 375 57.9
Sp5g35390 Schrenkiella parvula HOM05D007289 ORTHO05D009215 4.2e-103 379.0 370 58.1
AL2G41080 Arabidopsis lyrata HOM05D007289 ORTHO05D009215 5.5e-103 378.6 362 59.4
Aa31LG4G690 Aethionema arabicum HOM05D007289 ORTHO05D009215 9.4e-103 377.9 390 57.4
AT1G80420 Arabidopsis thaliana HOM05D007289 ORTHO05D009215 2.7e-102 376.3 366 57.9
CAN.G395.19 Capsicum annuum HOM05D007289 ORTHO05D009215 4.7e-102 375.6 376 57.2
Peaxi162Scf00207g00834 Petunia axillaris HOM05D007289 ORTHO05D009215 5.2e-101 372.1 310 64.2
MSTRG.11091 Avicennia marina HOM05D007289 ORTHO05D009215 8.8e-101 371.3 368 54.9
THA.LOC104808206 Tarenaya hassleriana HOM05D007289 ORTHO05D009215 8.8e-101 371.3 384 56.8
AUR62011614 Chenopodium quinoa HOM05D007289 ORTHO05D009215 2.6e-100 369.8 402 53.5
CARHR074820 Cardamine hirsuta HOM05D007289 ORTHO05D009215 2.8e-99 366.3 367 57.2
AUR62016430 Chenopodium quinoa HOM05D007289 ORTHO05D009215 6.3e-99 365.2 401 52.9
BcaC03g15968 Brassica carinata HOM05D007289 ORTHO05D009215 8.3e-99 364.8 365 57.3
Oeu033497.1 Olea europaea HOM05D007289 ORTHO05D009215 1.4e-98 364.0 358 57.0
Actinidia15825 Actinidia chinensis HOM05D002927 ORTHO05D003841 1.8e-98 363.6 320 65.3
C02p37330 Brassica napus HOM05D007289 ORTHO05D009215 1.8e-98 363.6 365 57.3
BolC2t09743H Brassica oleracea HOM05D007289 ORTHO05D009215 3.1e-98 362.8 365 57.3
A02p23560 Brassica napus HOM05D007289 ORTHO05D009215 9.1e-98 361.3 367 56.7
BraA02t07349Z Brassica rapa HOM05D007289 ORTHO05D009215 9.1e-98 361.3 367 56.7
Carub.0002s2715 Capsella rubella HOM05D007289 ORTHO05D009215 2.9e-96 356.3 375 54.7
ECA232G0523 Erigeron canadensis HOM05D007289 ORTHO05D009215 1.0e-93 347.8 369 55.6
Lsat_1_v5_gn_4_103480 Lactuca sativa HOM05D007289 ORTHO05D009215 1.0e-93 347.8 379 53.3
Migut.I00845 Erythranthe guttata HOM05D007289 ORTHO05D009215 1.8e-93 347.1 364 54.4
BcaB05g25270 Brassica carinata HOM05D002927 ORTHO05D003841 9.8e-92 341.3 366 54.6
Duzib235G0864 Durio zibethinus HOM05D007289 ORTHO05D009215 3.7e-91 339.3 383 54.3
Os06g0144000 Oryza sativa ssp. japonica HOM05D007289 ORTHO05D009215 4.9e-91 339.0 376 51.3
EL10Ac9g21988 Beta vulgaris HOM05D007289 ORTHO05D009215 1.1e-90 337.8 462 47.8
HanXRQChr16g0501051 Helianthus annuus HOM05D007289 ORTHO05D009215 2.4e-90 336.7 373 54.7
Nn8g39279 Nelumbo nucifera HOM05D007289 ORTHO05D009215 5.0e-88 328.9 378 52.9
ATR0037G063 Amborella trichopoda HOM05D007289 ORTHO05D009215 3.6e-86 322.8 411 46.7
CDE02G4373 Ceratophyllum demersum HOM05D004733 ORTHO05D005925 3.0e-85 319.7 390 47.2
Haze_16457 Corylus avellana HOM05D007289 ORTHO05D009215 1.7e-83 313.9 574 39.9
Cpa.g.sc10.164 Carica papaya HOM05D007289 ORTHO05D009215 2.9e-83 313.2 288 57.3
PSO339G0085 Papaver somniferum HOM05D007289 ORTHO05D009215 7.0e-82 308.5 277 59.6
SalBow2G1977 Salvia bowleyana HOM05D007289 ORTHO05D009215 2.3e-77 293.5 377 48.8
FAN05G4017 Fragaria x ananassa HOM05D007289 ORTHO05D009215 3.9e-72 276.2 203 75.4
Glyma.15G013100 Glycine max HOM05D007289 ORTHO05D009215 7.5e-68 261.9 235 59.6
SEGI_14605 Sequoiadendron giganteum HOM05D007289 ORTHO05D009215 2.9e-67 260.0 314 46.8
HPP92_000676 Vanilla planifolia HOM05D007289 ORTHO05D009215 3.2e-66 256.5 277 51.3
Gohir.D03G073900 Gossypium hirsutum HOM05D007289 ORTHO05D009215 2.4e-58 230.3 200 63.5
ClCG09G002310 Citrullus lanatus HOM05D007289 ORTHO05D009215 9.2e-58 228.4 179 65.9
Pp3c15_20480 Physcomitrium patens HOM05D007289 ORTHO05D009215 3.9e-56 223.0 316 39.9
FAN05G4871 Fragaria x ananassa HOM05D007289 ORTHO05D009215 1.9e-55 220.7 154 76.6
Eucgr.F03006 Eucalyptus grandis HOM05D007289 ORTHO05D009215 6.4e-51 205.7 227 51.5
Nitab4.5_0021849g0010 Nicotiana tabacum HOM05D007289 ORTHO05D009215 8.7e-48 195.3 208 55.3
TWI12G0812 Tripterygium wilfordii HOM05D007289 ORTHO05D009215 1.6e-46 191.0 196 59.2
Mapoly0044s0047 Marchantia polymorpha HOM05D007289 ORTHO05D009215 1.5e-44 184.5 382 33.5
unitig_21.g20513 Utricularia gibba HOM05D007289 ORTHO05D009215 3.4e-44 183.3 376 35.4
SEGI_13111 Sequoiadendron giganteum HOM05D007289 ORTHO05D009215 4.0e-37 159.8 186 51.1
Zm00001eb377280 Zea mays HOM05D007289 ORTHO05D009215 1.5e-36 157.9 194 45.9
ClCG09G002320 Citrullus lanatus HOM05D007289 ORTHO05D009215 3.8e-35 153.3 260 41.9
CBR_g23739 Chara braunii HOM05D007289 ORTHO05D009215 5.1e-32 142.9 102 59.8
Hma1.2p1_0845F.1_g227540 Hydrangea macrophylla HOM05D007289 ORTHO05D009215 1.8e-29 134.4 132 55.3
Lj2P1136T43 Lonicera japonica HOM05D007289 ORTHO05D009215 1.7e-27 127.9 111 62.2
Ah.01g011120 Amaranthus hybridus HOM05D007289 ORTHO05D009215 9.3e-26 122.1 146 47.9
Pp3c21_18730 Physcomitrium patens HOM05D007289 ORTHO05D009215 1.9e-10 71.2 146 30.8


User provided reference genes

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