Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.005G172600 Phaseolus vulgaris HOM05D007289 ORTHO05D009215 2.8e-216 755.0 381 100.0
VMungo1080G1522 Vigna mungo HOM05D007289 ORTHO05D009215 7.8e-190 667.2 386 88.3
Glyma.13G360800 Glycine max HOM05D007289 ORTHO05D009215 4.3e-180 634.8 384 84.1
Psat5g299280 Pisum sativum HOM05D007289 ORTHO05D009215 8.7e-157 557.4 379 75.7
Ca_01106_v3 Cicer arietinum L. HOM05D007289 ORTHO05D009215 8.1e-155 550.8 378 75.4
Lj3g0010801 Lotus japonicus HOM05D007289 ORTHO05D009215 4.0e-154 548.5 391 74.4
Lalb_Chr14g0373531 Lupinus albus HOM05D007289 ORTHO05D009215 4.3e-148 528.5 373 73.7
Lalb_Chr22g0351171 Lupinus albus HOM05D007289 ORTHO05D009215 1.3e-144 516.9 374 70.6
TPR.G37243 Trifolium pratense HOM05D007289 ORTHO05D009215 3.8e-144 515.4 379 71.2
Medtr2g102430 Medicago truncatula HOM05D007289 ORTHO05D009215 1.6e-142 510.0 369 72.4
arahy.Tifrunner.gnm1.ann1.HRS6MU Arachis hypogaea HOM05D007289 ORTHO05D009215 1.8e-133 479.9 384 67.7
arahy.Tifrunner.gnm1.ann1.UJ7D22 Arachis hypogaea HOM05D007289 ORTHO05D009215 8.7e-133 477.6 384 67.4
Prupe.3G073900 Prunus persica HOM05D007289 ORTHO05D009215 1.6e-123 446.8 371 62.5
MD17G1197800 Malus domestica HOM05D007289 ORTHO05D009215 1.0e-117 427.6 386 59.3
Dinv30529 Davidia involucrata HOM05D007289 ORTHO05D009215 2.2e-115 419.9 385 57.4
RcHm_v2.0_Chr2g0137421 Rosa chinensis HOM05D007289 ORTHO05D009215 1.5e-113 413.7 384 58.3
Ciclev10025766m.g Citrus clementina HOM05D007289 ORTHO05D009215 3.8e-112 409.1 378 59.0
FAN02G0535 Fragaria x ananassa HOM05D007289 ORTHO05D009215 6.5e-112 408.3 380 58.4
FvH4_6g30910 Fragaria vesca HOM05D007289 ORTHO05D009215 7.2e-111 404.8 380 58.2
CSS0039074 Camellia sinensis var. sinensis HOM05D007289 ORTHO05D009215 3.6e-110 402.5 378 54.8
TAR383G0594 Trochodendron aralioides HOM05D007289 ORTHO05D009215 3.9e-109 399.1 400 52.8
Cfa002049 Carpinus fangiana HOM05D007289 ORTHO05D009215 1.7e-104 383.6 380 55.0
Glyma.15G013100 Glycine max HOM05D007289 ORTHO05D009215 6.5e-104 381.7 243 79.4
Manes.04G121300 Manihot esculenta HOM05D007289 ORTHO05D009215 6.5e-104 381.7 384 54.2
vmacro18934 Vaccinium macrocarpon HOM05D007289 ORTHO05D009215 1.1e-103 380.9 384 53.9
Potri.001G178100 Populus trichocarpa HOM05D007289 ORTHO05D009215 1.4e-103 380.6 379 53.0
Sed0021795 Sechium edule HOM05D007289 ORTHO05D009215 1.9e-103 380.2 383 54.3
Lj9C506T12 Lonicera japonica HOM05D007289 ORTHO05D009215 2.5e-103 379.8 397 51.1
MELO3C023367.2 Cucumis melo HOM05D007289 ORTHO05D009215 5.5e-103 378.6 376 55.1
Aqoxy7G01850 Aquilegia oxysepala HOM05D007289 ORTHO05D009215 3.6e-102 375.9 400 51.2
Sabra01G0148500 Salix brachista HOM05D007289 ORTHO05D009215 1.4e-101 374.0 373 52.3
CsaV3_7G033000 Cucumis sativus L. HOM05D007289 ORTHO05D009215 2.3e-101 373.2 372 54.8
CANSAT56G1700 Cannabis sativa HOM05D007289 ORTHO05D009215 3.9e-101 372.5 391 51.9
TWI75G1369 Tripterygium wilfordii HOM05D007289 ORTHO05D009215 2.2e-99 366.7 370 53.8
CiPaw.02G152300 Carya illinoinensis HOM05D007289 ORTHO05D009215 3.7e-99 365.9 347 54.8
QL05p025382 Quercus lobata HOM05D007289 ORTHO05D009215 3.7e-99 365.9 395 51.9
Hund06601 Selenicereus undatus HOM05D007289 ORTHO05D009215 1.7e-96 357.1 390 50.3
MBI04_g26647_MAGBIO Magnolia biondii HOM05D007289 ORTHO05D009215 6.5e-96 355.1 376 51.9
PGSC0003DMG400016511 Solanum tuberosum HOM05D007289 ORTHO05D009215 6.5e-96 355.1 384 51.6
DCAR_016227 Daucus carota HOM05D007289 ORTHO05D009215 8.5e-96 354.8 366 52.7
Atru.chr1.3224 Acer truncatum HOM05D007289 ORTHO05D009215 1.1e-95 354.4 388 51.3
Peaxi162Scf00207g00834 Petunia axillaris HOM05D007289 ORTHO05D009215 3.2e-95 352.8 305 58.7
GSVIVG01017153001 Vitis vinifera HOM05D007289 ORTHO05D009215 3.2e-95 352.8 329 58.1
COL.COLO4_30328 Corchorus olitorius HOM05D007289 ORTHO05D009215 4.2e-95 352.4 384 51.3
Nitab4.5_0002327g0060 Nicotiana tabacum HOM05D007289 ORTHO05D009215 4.2e-95 352.4 382 51.0
Rhsim08G0218600 Rhododendron simsii HOM05D007289 ORTHO05D009215 5.5e-95 352.1 394 49.0
Sopen06g025060 Solanum pennellii HOM05D007289 ORTHO05D009215 7.2e-95 351.7 384 51.3
Thecc.06G082700 Theobroma cacao HOM05D007289 ORTHO05D009215 9.4e-95 351.3 378 51.3
Gohir.A02G122500 Gossypium hirsutum HOM05D007289 ORTHO05D009215 1.2e-94 350.9 387 50.1
Solyc06g066780.3 Solanum lycopersicum HOM05D007289 ORTHO05D009215 1.2e-94 350.9 386 51.8
Gorai.002G058300 Gossypium raimondii HOM05D007289 ORTHO05D009215 1.6e-94 350.5 385 50.4
FAN09G0173 Fragaria x ananassa HOM05D007289 ORTHO05D009215 2.1e-94 350.1 341 55.4
PGR102G0666 Punica granatum HOM05D007289 ORTHO05D009215 2.7e-94 349.7 370 50.5
THA.LOC104808206 Tarenaya hassleriana HOM05D007289 ORTHO05D009215 6.1e-94 348.6 386 53.1
PSO782G0119 Papaver somniferum HOM05D007289 ORTHO05D009215 8.0e-94 348.2 376 50.8
AL2G41080 Arabidopsis lyrata HOM05D007289 ORTHO05D009215 1.5e-92 344.0 367 52.6
Oeu033497.1 Olea europaea HOM05D007289 ORTHO05D009215 5.7e-92 342.0 355 52.7
CAN.G395.19 Capsicum annuum HOM05D007289 ORTHO05D009215 7.5e-92 341.7 377 49.9
CARHR074820 Cardamine hirsuta HOM05D007289 ORTHO05D009215 4.8e-91 339.0 367 50.7
Sc12g0009160 Simmondsia chinensis HOM05D007289 ORTHO05D009215 6.3e-91 338.6 383 48.0
Cc04_g03590 Coffea canephora HOM05D007289 ORTHO05D009215 5.3e-90 335.5 378 48.4
Aa31LG4G690 Aethionema arabicum HOM05D007289 ORTHO05D009215 1.6e-89 334.0 390 48.7
AUR62011614 Chenopodium quinoa HOM05D007289 ORTHO05D009215 1.6e-89 334.0 398 47.7
Lsat_1_v5_gn_4_103480 Lactuca sativa HOM05D007289 ORTHO05D009215 2.7e-89 333.2 375 51.7
Thhalv10018735m.g Eutrema salsugineum HOM05D007289 ORTHO05D009215 1.7e-88 330.5 373 49.9
AT1G80420 Arabidopsis thaliana HOM05D007289 ORTHO05D009215 2.9e-88 329.7 366 49.7
AUR62016430 Chenopodium quinoa HOM05D007289 ORTHO05D009215 5.0e-88 328.9 397 47.6
C02p37330 Brassica napus HOM05D007289 ORTHO05D009215 1.5e-87 327.4 365 50.7
BolC2t09743H Brassica oleracea HOM05D007289 ORTHO05D009215 2.5e-87 326.6 365 50.4
HanXRQChr16g0501051 Helianthus annuus HOM05D007289 ORTHO05D009215 4.2e-87 325.9 365 51.2
MSTRG.11091 Avicennia marina HOM05D007289 ORTHO05D009215 7.2e-87 325.1 377 46.9
BcaC03g15968 Brassica carinata HOM05D007289 ORTHO05D009215 2.7e-86 323.2 365 50.4
Migut.I00845 Erythranthe guttata HOM05D007289 ORTHO05D009215 8.0e-86 321.6 371 49.6
Sp5g35390 Schrenkiella parvula HOM05D007289 ORTHO05D009215 8.0e-86 321.6 372 50.5
ECA232G0523 Erigeron canadensis HOM05D007289 ORTHO05D009215 8.8e-85 318.2 369 49.9
A02p23560 Brassica napus HOM05D007289 ORTHO05D009215 1.5e-84 317.4 367 49.6
BraA02t07349Z Brassica rapa HOM05D007289 ORTHO05D009215 1.5e-84 317.4 367 49.6
Carub.0002s2715 Capsella rubella HOM05D007289 ORTHO05D009215 1.5e-84 317.4 372 47.8
Actinidia15825 Actinidia chinensis HOM05D002927 ORTHO05D003841 1.8e-82 310.5 334 52.1
BcaB05g25270 Brassica carinata HOM05D002927 ORTHO05D003841 1.8e-82 310.5 308 53.2
Os06g0144000 Oryza sativa ssp. japonica HOM05D007289 ORTHO05D009215 1.0e-80 304.7 372 47.0
Nn8g39279 Nelumbo nucifera HOM05D007289 ORTHO05D009215 1.1e-79 301.2 343 50.7
Duzib235G0864 Durio zibethinus HOM05D007289 ORTHO05D009215 1.9e-79 300.4 364 47.8
EL10Ac9g21988 Beta vulgaris HOM05D007289 ORTHO05D009215 1.6e-78 297.4 458 40.8
ATR0037G063 Amborella trichopoda HOM05D007289 ORTHO05D009215 1.8e-77 293.9 400 44.5
CDE02G4373 Ceratophyllum demersum HOM05D004733 ORTHO05D005925 1.3e-75 287.7 387 42.1
PSO339G0085 Papaver somniferum HOM05D007289 ORTHO05D009215 3.7e-75 286.2 276 53.6
Cpa.g.sc10.164 Carica papaya HOM05D007289 ORTHO05D009215 5.0e-72 275.8 288 49.7
SalBow2G1977 Salvia bowleyana HOM05D007289 ORTHO05D009215 8.0e-70 268.5 378 43.7
Haze_16457 Corylus avellana HOM05D007289 ORTHO05D009215 8.3e-67 258.5 572 34.3
SEGI_14605 Sequoiadendron giganteum HOM05D007289 ORTHO05D009215 9.5e-63 245.0 369 39.6
HPP92_000676 Vanilla planifolia HOM05D007289 ORTHO05D009215 2.8e-62 243.4 274 48.2
Pp3c15_20480 Physcomitrium patens HOM05D007289 ORTHO05D009215 8.6e-56 221.9 319 38.2
FAN05G4017 Fragaria x ananassa HOM05D007289 ORTHO05D009215 8.1e-54 215.3 194 58.8
ClCG09G002310 Citrullus lanatus HOM05D007289 ORTHO05D009215 1.9e-50 204.1 175 56.6
Gohir.D03G073900 Gossypium hirsutum HOM05D007289 ORTHO05D009215 5.1e-48 196.1 204 51.5
Eucgr.F03006 Eucalyptus grandis HOM05D007289 ORTHO05D009215 1.1e-47 194.9 225 46.7
Mapoly0044s0047 Marchantia polymorpha HOM05D007289 ORTHO05D009215 1.2e-46 191.4 360 33.6
FAN05G4871 Fragaria x ananassa HOM05D007289 ORTHO05D009215 4.4e-44 183.0 155 60.6
Nitab4.5_0021849g0010 Nicotiana tabacum HOM05D007289 ORTHO05D009215 1.9e-42 177.6 206 48.1
TWI12G0812 Tripterygium wilfordii HOM05D007289 ORTHO05D009215 2.5e-39 167.2 198 49.0
SEGI_13111 Sequoiadendron giganteum HOM05D007289 ORTHO05D009215 6.2e-38 162.5 184 47.8
unitig_21.g20513 Utricularia gibba HOM05D007289 ORTHO05D009215 3.8e-35 153.3 379 32.7
Zm00001eb377280 Zea mays HOM05D007289 ORTHO05D009215 4.6e-33 146.4 195 43.6
CBR_g23739 Chara braunii HOM05D007289 ORTHO05D009215 2.3e-32 144.1 96 64.6
ClCG09G002320 Citrullus lanatus HOM05D007289 ORTHO05D009215 1.3e-30 138.3 274 37.2
Lj2P1136T43 Lonicera japonica HOM05D007289 ORTHO05D009215 3.2e-26 123.6 111 56.8
Hma1.2p1_0845F.1_g227540 Hydrangea macrophylla HOM05D007289 ORTHO05D009215 8.7e-24 115.5 134 47.8
Ah.01g011120 Amaranthus hybridus HOM05D007289 ORTHO05D009215 2.4e-21 107.5 144 41.7
Pp3c21_18730 Physcomitrium patens HOM05D007289 ORTHO05D009215 5.1e-08 63.2 118 28.0


User provided reference genes

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