Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.003G000400 Phaseolus vulgaris HOM05D003289 ORTHO05D004594 3.9e-90 334.7 164 100.0
Phvul.011G091900 Phaseolus vulgaris HOM05D003289 ORTHO05D004594 2.9e-53 212.2 155 72.9
Glyma.12G087000 Glycine max HOM05D003289 ORTHO05D004594 8.6e-53 210.7 155 72.3
VMungo1127G1826 Vigna mungo HOM05D003289 ORTHO05D004594 8.6e-53 210.7 155 72.3
unitig_22.g6642 Utricularia gibba HOM05D003289 ORTHO05D004594 1.5e-52 209.9 134 79.9
Eucgr.B03882 Eucalyptus grandis HOM05D003289 ORTHO05D004594 3.3e-52 208.8 155 71.6
Lalb_Chr19g0136661 Lupinus albus HOM05D003289 ORTHO05D004594 3.3e-52 208.8 155 71.0
Psat7g189880 Pisum sativum HOM05D003289 ORTHO05D004594 3.3e-52 208.8 155 71.6
MD11G1160700 Malus domestica HOM05D003289 ORTHO05D004594 5.5e-52 208.0 154 71.4
arahy.Tifrunner.gnm1.ann1.F25EMM Arachis hypogaea HOM05D003289 ORTHO05D004594 7.2e-52 207.6 155 71.6
arahy.Tifrunner.gnm1.ann1.U78W58 Arachis hypogaea HOM05D003289 ORTHO05D004594 7.2e-52 207.6 155 71.6
Glyma.11G237700 Glycine max HOM05D003289 ORTHO05D004594 7.2e-52 207.6 155 71.6
MD03G1139200 Malus domestica HOM05D003289 ORTHO05D004594 9.5e-52 207.2 155 71.0
Medtr4g054980 Medicago truncatula HOM05D003289 ORTHO05D004594 9.5e-52 207.2 155 71.0
TPR.G15595 Trifolium pratense HOM05D003289 ORTHO05D004594 9.5e-52 207.2 155 71.0
Nitab4.5_0003532g0030 Nicotiana tabacum HOM05D003289 ORTHO05D004594 1.6e-51 206.5 155 71.0
Nitab4.5_0004240g0030 Nicotiana tabacum HOM05D003289 ORTHO05D004594 1.6e-51 206.5 155 71.0
Peaxi162Scf00544g00920 Petunia axillaris HOM05D003289 ORTHO05D004594 1.6e-51 206.5 155 71.0
Lj3g0000987 Lotus japonicus HOM05D003289 ORTHO05D004594 2.1e-51 206.1 155 70.3
Aqoxy2G01337 Aquilegia oxysepala HOM05D003289 ORTHO05D004594 2.8e-51 205.7 155 70.3
CANSAT54G1671 Cannabis sativa HOM05D003289 ORTHO05D004594 2.8e-51 205.7 155 69.7
Actinidia07230 Actinidia chinensis HOM05D003289 ORTHO05D004594 3.6e-51 205.3 155 70.3
Nn2g14071 Nelumbo nucifera HOM05D003289 ORTHO05D004594 3.6e-51 205.3 155 70.3
ClCG02G022050 Citrullus lanatus HOM05D003289 ORTHO05D004594 4.7e-51 204.9 154 70.1
MELO3C021434.2 Cucumis melo HOM05D003289 ORTHO05D004594 4.7e-51 204.9 154 70.1
CsaV3_6G014890 Cucumis sativus L. HOM05D003289 ORTHO05D004594 4.7e-51 204.9 154 70.1
ECA233G3796 Erigeron canadensis HOM05D003289 ORTHO05D004594 6.1e-51 204.5 154 70.1
FvH4_3g29570 Fragaria vesca HOM05D003289 ORTHO05D004594 6.1e-51 204.5 155 69.7
FAN16G3075 Fragaria x ananassa HOM05D003289 ORTHO05D004594 6.1e-51 204.5 155 69.7
RcHm_v2.0_Chr5g0054631 Rosa chinensis HOM05D003289 ORTHO05D004594 6.1e-51 204.5 155 69.7
Thecc.09G288000 Theobroma cacao HOM05D003289 ORTHO05D004594 6.1e-51 204.5 155 70.3
CSS0049320 Camellia sinensis var. sinensis HOM05D003289 ORTHO05D004594 8.0e-51 204.1 155 69.7
CAN.G644.7 Capsicum annuum HOM05D003289 ORTHO05D004594 8.0e-51 204.1 155 70.3
Cpa.g.sc32.131 Carica papaya HOM05D003289 ORTHO05D004594 8.0e-51 204.1 189 59.8
Gohir.A05G082500 Gossypium hirsutum HOM05D003289 ORTHO05D004594 8.0e-51 204.1 155 69.7
Sabra04G0125000 Salix brachista HOM05D003289 ORTHO05D004594 8.0e-51 204.1 155 69.7
Sc21g0007220 Simmondsia chinensis HOM05D003289 ORTHO05D004594 8.0e-51 204.1 159 68.6
Sopen11g026820 Solanum pennellii HOM05D003289 ORTHO05D004594 8.0e-51 204.1 155 70.3
Migut.N02501 Erythranthe guttata HOM05D003289 ORTHO05D004594 1.0e-50 203.8 154 69.5
Lj2C988G5 Lonicera japonica HOM05D003289 ORTHO05D004594 1.4e-50 203.4 155 69.0
Manes.04G006100 Manihot esculenta HOM05D003289 ORTHO05D004594 1.4e-50 203.4 155 69.7
PGR102G2277 Punica granatum HOM05D003289 ORTHO05D004594 1.4e-50 203.4 155 69.7
ATR0820G092 Amborella trichopoda HOM05D003289 ORTHO05D004594 1.8e-50 203.0 155 69.0
QL01p013239 Quercus lobata HOM05D003289 ORTHO05D004594 1.8e-50 203.0 155 69.0
COL.COLO4_19937 Corchorus olitorius HOM05D003289 ORTHO05D004594 2.3e-50 202.6 155 69.0
MBI15_g14875_MAGBIO Magnolia biondii HOM05D003289 ORTHO05D004594 2.3e-50 202.6 155 69.0
Sed0008797 Sechium edule HOM05D003289 ORTHO05D004594 2.3e-50 202.6 154 69.5
SGA_v2.0_scaffold102G29919 Striga asiatica HOM05D003289 ORTHO05D004594 2.3e-50 202.6 155 69.0
Zm00001eb241860 Zea mays HOM05D003289 ORTHO05D004594 2.3e-50 202.6 154 69.5
MSTRG.17714 Avicennia marina HOM05D003289 ORTHO05D004594 3.0e-50 202.2 160 66.9
AUR62039240 Chenopodium quinoa HOM05D003289 ORTHO05D004594 3.0e-50 202.2 160 66.9
Ciclev10027662m.g Citrus clementina HOM05D003289 ORTHO05D004594 3.0e-50 202.2 155 69.0
Potri.004G185700 Populus trichocarpa HOM05D003289 ORTHO05D004594 3.0e-50 202.2 155 69.0
Rhsim13G0107600 Rhododendron simsii HOM05D003289 ORTHO05D004594 3.0e-50 202.2 155 69.7
TAR636G3131 Trochodendron aralioides HOM05D003289 ORTHO05D004594 3.0e-50 202.2 155 69.0
DCAR_012181 Daucus carota HOM05D003289 ORTHO05D004594 4.0e-50 201.8 155 69.0
GSVIVG01031365001 Vitis vinifera HOM05D003289 ORTHO05D004594 4.0e-50 201.8 155 68.4
Haze_23425 Corylus avellana HOM05D003289 ORTHO05D004594 6.8e-50 201.1 155 69.0
EL10Ac7g15792 Beta vulgaris HOM05D003289 ORTHO05D004594 8.9e-50 200.7 155 68.4
CiPaw.13G138900 Carya illinoinensis HOM05D003289 ORTHO05D004594 8.9e-50 200.7 155 69.0
Hund20868 Selenicereus undatus HOM05D003289 ORTHO05D004594 8.9e-50 200.7 160 66.2
Thhalv10006524m.g Eutrema salsugineum HOM05D003289 ORTHO05D004594 1.2e-49 200.3 154 68.2
PSO384G0460 Papaver somniferum HOM05D003289 ORTHO05D004594 1.2e-49 200.3 155 68.4
Sp1g06890 Schrenkiella parvula HOM05D003289 ORTHO05D004594 1.2e-49 200.3 154 68.2
vmacro03295 Vaccinium macrocarpon HOM05D003289 ORTHO05D004594 1.2e-49 200.3 155 69.0
Oeu031488.2 Olea europaea HOM05D003289 ORTHO05D004594 1.5e-49 199.9 155 68.4
SHI18830 Sapria himalayana HOM05D003289 ORTHO05D004594 1.5e-49 199.9 156 67.3
Ah.08g215940 Amaranthus hybridus HOM05D003289 ORTHO05D004594 2.0e-49 199.5 160 65.6
Gorai.009G087200 Gossypium raimondii HOM05D003289 ORTHO05D004594 2.0e-49 199.5 155 68.4
PSO425G0048 Papaver somniferum HOM05D003289 ORTHO05D004594 2.0e-49 199.5 155 68.4
AUR62009793 Chenopodium quinoa HOM05D003289 ORTHO05D004594 2.6e-49 199.1 160 66.2
Gorai.005G156700 Gossypium raimondii HOM05D003289 ORTHO05D004594 2.6e-49 199.1 155 67.7
SalBow3G0618 Salvia bowleyana HOM05D003289 ORTHO05D004594 2.6e-49 199.1 155 67.7
AL1G18660 Arabidopsis lyrata HOM05D003289 ORTHO05D004594 3.4e-49 198.7 154 67.5
AL4G20650 Arabidopsis lyrata HOM05D003289 ORTHO05D004594 3.4e-49 198.7 154 66.9
AT1G08260 Arabidopsis thaliana HOM05D003289 ORTHO05D004594 3.4e-49 198.7 154 67.5
BcaB07g34067 Brassica carinata HOM05D003289 ORTHO05D004594 3.4e-49 198.7 154 67.5
SEGI_26591 Sequoiadendron giganteum HOM05D003289 ORTHO05D004594 4.4e-49 198.4 155 68.4
A06p05280 Brassica napus HOM05D003289 ORTHO05D004594 5.7e-49 198.0 154 66.2
C05p06350 Brassica napus HOM05D003289 ORTHO05D004594 5.7e-49 198.0 154 66.2
BolC5t29391H Brassica oleracea HOM05D003289 ORTHO05D004594 5.7e-49 198.0 154 66.2
BraA06t23736Z Brassica rapa HOM05D003289 ORTHO05D004594 5.7e-49 198.0 154 66.2
Carub.0001s0761 Capsella rubella HOM05D003289 ORTHO05D004594 7.5e-49 197.6 154 67.5
ClCG09G020580 Citrullus lanatus HOM05D003289 ORTHO05D004594 7.5e-49 197.6 154 68.2
Atru.chr3.3336 Acer truncatum HOM05D003289 ORTHO05D004594 1.3e-48 196.8 154 67.5
Cc01_g09530 Coffea canephora HOM05D003289 ORTHO05D004594 1.7e-48 196.4 166 63.3
THA.LOC104826411 Tarenaya hassleriana HOM05D003289 ORTHO05D004594 1.7e-48 196.4 154 66.9
HPP92_025278 Vanilla planifolia HOM05D003289 ORTHO05D004594 1.7e-48 196.4 155 67.1
AL4G20810 Arabidopsis lyrata HOM05D003289 ORTHO05D004594 2.2e-48 196.1 157 65.0
AT2G27120 Arabidopsis thaliana HOM05D003289 ORTHO05D004594 2.8e-48 195.7 154 66.2
FAN11G3202 Fragaria x ananassa HOM05D003289 ORTHO05D004594 1.1e-47 193.7 173 61.8
HanXRQChr05g0145141 Helianthus annuus HOM05D003289 ORTHO05D004594 1.1e-47 193.7 154 65.6
Duzib168G1226 Durio zibethinus HOM05D003289 ORTHO05D004594 1.8e-47 193.0 181 59.7
Lsat_1_v5_gn_6_39380 Lactuca sativa HOM05D003289 ORTHO05D004594 2.4e-47 192.6 155 66.5
Ca_19261_v3 Cicer arietinum L. HOM05D003289 ORTHO05D004594 4.1e-47 191.8 159 65.4
Lsat_1_v5_gn_6_39840 Lactuca sativa HOM05D003289 ORTHO05D004594 4.1e-47 191.8 155 66.5
Mapoly0006s0290 Marchantia polymorpha HOM05D003289 ORTHO05D004594 4.1e-47 191.8 155 65.8
SMO144G0205 Selaginella moellendorffii HOM05D003289 ORTHO05D004594 4.1e-47 191.8 157 64.3
CARHR008100 Cardamine hirsuta HOM05D003289 ORTHO05D004594 7.0e-47 191.0 154 65.6
Aa31LG2G19310 Aethionema arabicum HOM05D003289 ORTHO05D004594 1.2e-46 190.3 154 64.9
AagrBONN_evm.TU.Sc2ySwM_340.389 Anthoceros agrestis HOM05D003289 ORTHO05D004594 2.7e-46 189.1 154 64.9
Pp3c13_4500 Physcomitrium patens HOM05D003289 ORTHO05D004594 3.5e-46 188.7 154 64.3
Prupe.6G124200 Prunus persica HOM05D003289 ORTHO05D004594 7.8e-46 187.6 203 54.2
HanXRQChr09g0249471 Helianthus annuus HOM05D003289 ORTHO05D004594 1.0e-45 187.2 153 64.1
PSO782G5595 Papaver somniferum HOM05D003289 ORTHO05D004594 2.3e-45 186.0 156 63.5
arahy.Tifrunner.gnm1.ann1.B2Y78K Arachis hypogaea HOM05D003289 ORTHO05D004594 5.8e-41 171.4 121 76.0
MCO02G508 Micromonas commoda HOM05D003289 ORTHO05D004594 7.5e-41 171.0 157 59.2
Hma1.2p1_0305F.1_g119455 Hydrangea macrophylla HOM05D003289 ORTHO05D004594 4.9e-40 168.3 130 70.8
COL.COLO4_06999 Corchorus olitorius HOM05D003289 ORTHO05D004594 2.7e-38 162.5 144 63.2
MELO3C002892.2 Cucumis melo HOM05D003289 ORTHO05D004594 3.9e-37 158.7 154 58.4
Cfa025881 Carpinus fangiana HOM05D003289 ORTHO05D004594 1.2e-35 153.7 154 55.2
CBR_g8395 Chara braunii HOM05D003289 ORTHO05D004594 2.3e-34 149.4 134 60.4
PRCOL_00004747 Prasinoderma coloniale HOM05D003289 ORTHO05D004594 1.5e-33 146.7 159 51.6
CDE02G3272 Ceratophyllum demersum HOM05D003289 ORTHO05D004594 2.2e-32 142.9 74 91.9
Gohir.D05G085400 Gossypium hirsutum HOM05D003289 ORTHO05D004594 2.9e-32 142.5 75 90.7
Gohir.D02G140050 Gossypium hirsutum HOM05D003289 ORTHO05D004594 4.9e-32 141.7 75 89.3
Cre03.g179961 Chlamydomonas reinhardtii HOM05D003289 ORTHO05D004594 7.3e-28 127.9 147 52.4
Glyma.18G157402 Glycine max HOM05D003289 ORTHO05D004594 1.1e-18 97.4 100 55.0
Glyma.13G033700 Glycine max HOM05D003289 ORTHO05D004594 6.8e-18 94.7 100 54.0
FAN21G1989 Fragaria x ananassa HOM05D003289 ORTHO05D004594 6.0e-14 81.6 79 53.2
CANSAT25G1376 Cannabis sativa HOM05D003289 ORTHO05D004594 3.9e-13 79.0 39 92.3
Zm00001eb359770 Zea mays HOM05D001145 ORTHO05D001415 3.9e-13 79.0 41 92.7
CDE02G3768 Ceratophyllum demersum HOM05D003289 ORTHO05D004594 5.1e-13 78.6 39 89.7
arahy.Tifrunner.gnm1.ann1.183PB6 Arachis hypogaea HOM05D003289 ORTHO05D004594 6.9e-10 68.2 39 82.1


User provided reference genes

Program Settings