Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO832G1124 Papaver somniferum HOM05D001197 ORTHO05D008702 8.0e-82 307.0 149 100.0
PSO478G4134 Papaver somniferum HOM05D001197 ORTHO05D008702 6.2e-34 147.9 104 76.0
PSO339G3256 Papaver somniferum HOM05D001197 ORTHO05D008702 3.8e-31 138.7 88 78.4
PSO384G1608 Papaver somniferum HOM05D001197 ORTHO05D008702 1.2e-29 133.7 88 78.4
TAR623G1766 Trochodendron aralioides HOM05D001197 ORTHO05D008702 4.3e-19 98.6 88 59.1
Aqoxy5G00393 Aquilegia oxysepala HOM05D001197 ORTHO05D008702 7.3e-19 97.8 77 58.4
GSVIVG01011252001 Vitis vinifera HOM05D001197 ORTHO05D008702 7.3e-19 97.8 77 59.7
Actinidia18590 Actinidia chinensis HOM05D001197 ORTHO05D008702 1.3e-18 97.1 77 58.4
CSS0048572 Camellia sinensis var. sinensis HOM05D001197 ORTHO05D008702 2.1e-18 96.3 88 55.7
Dinv02037 Davidia involucrata HOM05D001197 ORTHO05D008702 2.1e-18 96.3 88 56.8
Dinv06778 Davidia involucrata HOM05D001197 ORTHO05D008702 2.1e-18 96.3 88 56.8
Nn6g34956 Nelumbo nucifera HOM05D001197 ORTHO05D008702 3.6e-18 95.5 88 55.7
Lj5g0027704 Lotus japonicus HOM05D001197 ORTHO05D008702 6.2e-18 94.7 77 62.3
Dinv02034 Davidia involucrata HOM05D000097 ORTHO05D000041 2.4e-17 92.8 88 56.8
Lj2C31G3 Lonicera japonica HOM05D001197 ORTHO05D008702 5.3e-17 91.7 77 58.4
Glyma.20G187000 Glycine max HOM05D001197 ORTHO05D008702 9.0e-17 90.9 77 57.1
Lalb_Chr02g0151701 Lupinus albus HOM05D001197 ORTHO05D008702 9.9e-16 87.4 77 58.4
Atru.chr12.997 Acer truncatum HOM05D001197 ORTHO05D008702 1.7e-15 86.7 77 53.2
Prupe.2G080000 Prunus persica HOM05D001197 ORTHO05D008702 1.7e-15 86.7 88 51.1
Thecc.10G108300 Theobroma cacao HOM05D001197 ORTHO05D008702 2.2e-15 86.3 88 47.7
VMungo0720G1910 Vigna mungo HOM05D001197 ORTHO05D008702 2.2e-15 86.3 77 55.8
MSTRG.27530 Avicennia marina HOM05D001197 ORTHO05D008702 2.9e-15 85.9 88 45.5
Cfa011257 Carpinus fangiana HOM05D001197 ORTHO05D008702 2.9e-15 85.9 88 50.0
Potri.008G022200 Populus trichocarpa HOM05D001197 ORTHO05D008702 2.9e-15 85.9 77 55.8
COL.COLO4_00312 Corchorus olitorius HOM05D001197 ORTHO05D008702 3.8e-15 85.5 88 52.3
Phvul.007G103400 Phaseolus vulgaris HOM05D001197 ORTHO05D008702 3.8e-15 85.5 77 55.8
Oeu030505.1 Olea europaea HOM05D001197 ORTHO05D008702 6.4e-15 84.7 77 49.4
Duzib128G1987 Durio zibethinus HOM05D001197 ORTHO05D008702 8.4e-15 84.3 88 47.7
Rhsim03G0101200 Rhododendron simsii HOM05D001197 ORTHO05D008702 8.4e-15 84.3 88 50.0
Potri.010G237200 Populus trichocarpa HOM05D001197 ORTHO05D008702 1.1e-14 84.0 88 52.3
QL04p043550 Quercus lobata HOM05D001197 ORTHO05D008702 1.1e-14 84.0 88 47.7
Sabra10G0185700 Salix brachista HOM05D001197 ORTHO05D008702 1.9e-14 83.2 77 55.8
Hma1.2p1_1064F.1_g253640 Hydrangea macrophylla HOM05D001197 ORTHO05D008702 3.2e-14 82.4 79 51.9
PGSC0003DMG400019468 Solanum tuberosum HOM05D001197 ORTHO05D008702 4.2e-14 82.0 77 53.2
QL04p077986 Quercus lobata HOM05D001197 ORTHO05D008702 5.4e-14 81.6 88 45.5
Ciclev10031772m.g Citrus clementina HOM05D001197 ORTHO05D008702 7.1e-14 81.3 77 49.4
Nitab4.5_0001437g0210 Nicotiana tabacum HOM05D001197 ORTHO05D008702 7.1e-14 81.3 77 51.9
Sopen11g003080 Solanum pennellii HOM05D001197 ORTHO05D008702 7.1e-14 81.3 88 50.0
Manes.10G057900 Manihot esculenta HOM05D001197 ORTHO05D008702 1.2e-13 80.5 88 50.0
Solyc11g007160.2 Solanum lycopersicum HOM05D001197 ORTHO05D008702 1.6e-13 80.1 88 48.9
Aqoxy2G01237 Aquilegia oxysepala HOM05D001197 ORTHO05D008702 2.7e-13 79.3 77 50.6
RcHm_v2.0_Chr1g0332801 Rosa chinensis HOM05D001197 ORTHO05D008702 2.7e-13 79.3 88 46.6
ATR0564G395 Amborella trichopoda HOM05D001197 ORTHO05D008702 3.5e-13 79.0 101 49.5
Hma1.2p1_0246F.1_g101620 Hydrangea macrophylla HOM05D001197 ORTHO05D008702 4.6e-13 78.6 79 50.6
Peaxi162Scf00173g00825 Petunia axillaris HOM05D001197 ORTHO05D008702 4.6e-13 78.6 77 50.6
Cpa.g.c32761 Carica papaya HOM05D001197 ORTHO05D008702 7.9e-13 77.8 88 47.7
Haze_02528 Corylus avellana HOM05D001197 ORTHO05D008702 1.0e-12 77.4 88 46.6
Gohir.A10G197850 Gossypium hirsutum HOM05D000001 ORTHO05D008702 1.0e-12 77.4 88 45.5
Gorai.011G229900 Gossypium raimondii HOM05D000001 ORTHO05D000003 1.0e-12 77.4 88 45.5
Ca_10508_v3 Cicer arietinum L. HOM05D001197 ORTHO05D008702 1.3e-12 77.0 77 55.8
MD02G1255600 Malus domestica HOM05D001197 ORTHO05D008702 1.8e-12 76.6 88 46.6
Gohir.D10G204950 Gossypium hirsutum HOM05D000001 ORTHO05D000003 2.3e-12 76.3 88 45.5
TWI38G2166 Tripterygium wilfordii HOM05D001197 ORTHO05D008702 2.3e-12 76.3 88 50.0
FvH4_7g05760 Fragaria vesca HOM05D001197 ORTHO05D008702 3.0e-12 75.9 88 46.6
CDE11G0878 Ceratophyllum demersum HOM05D001197 ORTHO05D008702 3.9e-12 75.5 88 46.6
Nitab4.5_0012407g0010 Nicotiana tabacum HOM05D001197 ORTHO05D008702 1.1e-11 73.9 77 49.4
QL04p044720 Quercus lobata HOM05D001197 ORTHO05D008702 1.5e-11 73.6 88 43.2
QL08p060742 Quercus lobata HOM05D001197 ORTHO05D008702 1.5e-11 73.6 88 43.2
AUR62002954 Chenopodium quinoa HOM05D001197 ORTHO05D008702 1.9e-11 73.2 77 53.2
FAN01G1755 Fragaria x ananassa HOM05D001197 ORTHO05D008702 1.9e-11 73.2 88 45.5
FAN06G1201 Fragaria x ananassa HOM05D001197 ORTHO05D008702 1.9e-11 73.2 88 45.5
AUR62007759 Chenopodium quinoa HOM05D001197 ORTHO05D008702 4.3e-11 72.0 77 53.2
Migut.F00903 Erythranthe guttata HOM05D001197 ORTHO05D008702 4.3e-11 72.0 88 42.0
Sed0013914 Sechium edule HOM05D001197 ORTHO05D008702 5.6e-11 71.6 88 43.2
unitig_899.g14476 Utricularia gibba HOM05D001197 ORTHO05D008702 7.4e-11 71.2 78 47.4
DCAR_028401 Daucus carota HOM05D001197 ORTHO05D008702 9.6e-11 70.9 77 49.4
FAN03G2112 Fragaria x ananassa HOM05D001197 ORTHO05D008702 9.6e-11 70.9 88 44.3
ECA233G1672 Erigeron canadensis HOM05D001197 ORTHO05D008702 1.3e-10 70.5 70 48.6
THA.LOC104810247 Tarenaya hassleriana HOM05D001197 ORTHO05D008702 1.6e-10 70.1 77 48.1
CsaV3_6G004150 Cucumis sativus L. HOM05D001197 ORTHO05D008702 4.8e-10 68.6 88 43.2
FAN10G3262 Fragaria x ananassa HOM05D001197 ORTHO05D008702 4.8e-10 68.6 88 44.3
CiPaw.12G015900 Carya illinoinensis HOM05D001197 ORTHO05D008702 1.4e-09 67.0 88 45.5
HanXRQChr08g0217801 Helianthus annuus HOM05D001197 ORTHO05D008702 1.8e-09 66.6 76 44.7
ClCG08G008180 Citrullus lanatus HOM05D001197 ORTHO05D008702 2.4e-09 66.2 88 42.0
MELO3C019891.2 Cucumis melo HOM05D001197 ORTHO05D008702 2.4e-09 66.2 88 42.0
Ah.07g202960 Amaranthus hybridus HOM05D001197 ORTHO05D008702 4.0e-09 65.5 77 45.5
BcaB06g26170 Brassica carinata HOM05D001197 ORTHO05D008702 9.0e-09 64.3 77 45.5
Eucgr.G02699 Eucalyptus grandis HOM05D001197 ORTHO05D008702 1.2e-08 63.9 87 41.4
AT3G20930 Arabidopsis thaliana HOM05D001197 ORTHO05D008702 2.0e-08 63.2 77 41.6
BraA05t21665Z Brassica rapa HOM05D001197 ORTHO05D008702 2.6e-08 62.8 77 44.2
SGA_v2.0_scaffold7G03940 Striga asiatica HOM05D001197 ORTHO05D008702 2.6e-08 62.8 93 37.6
HanXRQChr08g0217811 Helianthus annuus HOM05D001197 ORTHO05D008702 3.4e-08 62.4 88 39.8
BcaC05g28206 Brassica carinata HOM05D001197 ORTHO05D008702 4.5e-08 62.0 77 42.9
C05p43120 Brassica napus HOM05D001197 ORTHO05D008702 4.5e-08 62.0 77 42.9
BolC5t33042H Brassica oleracea HOM05D001197 ORTHO05D008702 4.5e-08 62.0 77 42.9
Aa31LG8G7750 Aethionema arabicum HOM05D001197 ORTHO05D008702 5.8e-08 61.6 77 42.9
Carub.0003s2091 Capsella rubella HOM05D001197 ORTHO05D008702 5.8e-08 61.6 77 42.9
Thhalv10020913m.g Eutrema salsugineum HOM05D001197 ORTHO05D008702 5.8e-08 61.6 77 44.2
Sp3g18960 Schrenkiella parvula HOM05D001197 ORTHO05D008702 5.8e-08 61.6 77 44.2
CiPaw.14G032500 Carya illinoinensis HOM05D001197 ORTHO05D008702 1.7e-07 60.1 77 44.2
A05p27780 Brassica napus HOM05D001197 ORTHO05D008702 2.2e-07 59.7 77 42.9
AL3G34890 Arabidopsis lyrata HOM05D001197 ORTHO05D008702 6.4e-07 58.2 77 41.6
Os02g0730800 Oryza sativa ssp. japonica HOM05D001197 ORTHO05D008702 1.1e-06 57.4 78 39.7
Medtr1g092860 Medicago truncatula HOM05D001197 ORTHO05D008702 9.3e-06 54.3 70 45.7
Psat6g177560 Pisum sativum HOM05D001197 ORTHO05D008702 9.3e-06 54.3 70 42.9


User provided reference genes

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