Gene: ECA233G1672
General Information
Structural Information
- Species Erigeron canadensis
- Gene Identifier ECA233G1672
- Transcript Identifier ECA233G1672.1
- Gene Type Coding gene
- Location Conyza_canadensis_scaffold:1 : 33509589-33514981 : negative
Gene Family Information
- ID HOM05D001197
- #Genes/#Species 523/92
- Phylogenetic origin
- ID ORTHO05D008702
- #Genes/#Species 115/83
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- name g3474
- Alias g3474.t2
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016554 | IEA | InterPro | cytidine to uridine editing | |
| GO:0009409 | ISO | PLAZA Integrative Orthology | response to cold | AT3G20930 |
| GO:1900871 | ISO | PLAZA Integrative Orthology | chloroplast mRNA modification | Zm00001eb253560 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003676 | IEA | InterPro | nucleic acid binding | |
| GO:0003723 | ISO | PLAZA Integrative Orthology | RNA binding | AT3G20930 |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT3G20930 |
| GO:0003729 | ISO | PLAZA Integrative Orthology | mRNA binding | AT3G20930 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR000504 | RNA recognition motif domain |
| IPR036514 | SGNH hydrolase superfamily |
| IPR012677 | Nucleotide-binding alpha-beta plait domain superfamily |
| IPR039206 | MORF/ORRM1/DAG-like |
| IPR035979 | RNA-binding domain superfamily |
| IPR037045 | Peptidase S8 propeptide/proteinase inhibitor I9 superfamily |
| Mapman id | Description |
|---|---|
| 16.11.3.3.2 | RNA processing.organelle machinery.RNA modification.C-to-U RNA editing.RNA editing factor (ORRM) |