Gene: CiPaw.14G032500

General Information

Structural Information

  • Species Carya illinoinensis
  • Gene Identifier CiPaw.14G032500
  • Transcript Identifier CiPaw.14G032500.1
  • Gene Type Coding gene
  • Location Chr14 : 4863681-4866706 : negative

Gene Family Information

  • ID HOM05D001197
  • #Genes/#Species 523/92
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id CiPaw.14G032500.v1.1
  • pacid 45806028

Descriptions

  • Description PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016554
IEA
InterProcytidine to uridine editing
GO:0009409
ISO
PLAZA Integrative Orthologyresponse to cold AT3G20930
GO:1900871
ISO
PLAZA Integrative Orthologychloroplast mRNA modification Zm00001eb253560

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
InterPronucleic acid binding
GO:0003723
ISO
PLAZA Integrative OrthologyRNA binding AT3G20930
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT3G20930
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT3G20930

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
IPR039206 MORF/ORRM1/DAG-like
IPR000504 RNA recognition motif domain
IPR035979 RNA-binding domain superfamily
IPR037045 Peptidase S8 propeptide/proteinase inhibitor I9 superfamily
Mapman id Description
16.11.3.3.2 RNA processing.organelle machinery.RNA modification.C-to-U RNA editing.RNA editing factor (ORRM)