Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO541G4058 Papaver somniferum HOM05D006779 ORTHO05D008491 6.0e-117 424.5 261 100.0
PSO675G5018 Papaver somniferum HOM05D006779 ORTHO05D008491 2.0e-112 409.5 261 97.3
Aqoxy6G01411 Aquilegia oxysepala HOM05D006779 ORTHO05D008491 8.2e-66 254.6 267 62.9
Dinv23582 Davidia involucrata HOM05D006779 ORTHO05D008491 1.4e-65 253.8 260 60.8
CiPaw.05G054000 Carya illinoinensis HOM05D006779 ORTHO05D008491 4.1e-65 252.3 264 62.5
Sabra09G0080600 Salix brachista HOM05D006779 ORTHO05D008491 4.5e-64 248.8 263 61.6
GSVIVG01031784001 Vitis vinifera HOM05D006779 ORTHO05D008491 2.2e-63 246.5 263 62.4
QL11p037315 Quercus lobata HOM05D006779 ORTHO05D008491 2.9e-63 246.1 264 61.0
Haze_01903 Corylus avellana HOM05D006779 ORTHO05D008491 3.8e-63 245.7 264 61.0
Nn5g30192 Nelumbo nucifera HOM05D006779 ORTHO05D008491 6.5e-63 245.0 262 61.5
Potri.009G105500 Populus trichocarpa HOM05D006779 ORTHO05D008491 1.1e-62 244.2 263 60.8
Dinv42131 Davidia involucrata HOM05D006779 ORTHO05D008491 1.5e-62 243.8 262 58.0
Oeu064516.1 Olea europaea HOM05D006779 ORTHO05D008491 1.9e-62 243.4 260 58.8
Sed0011670 Sechium edule HOM05D006779 ORTHO05D008491 2.5e-62 243.0 263 60.5
CsaV3_7G008730 Cucumis sativus L. HOM05D006779 ORTHO05D008491 1.0e-60 237.7 263 59.3
Actinidia00459 Actinidia chinensis HOM05D006779 ORTHO05D008491 3.0e-60 236.1 259 53.3
FAN20G2937 Fragaria x ananassa HOM05D006779 ORTHO05D008491 3.0e-60 236.1 264 57.2
FvH4_2g06680 Fragaria vesca HOM05D006779 ORTHO05D008491 4.0e-60 235.7 264 57.6
FAN15G3147 Fragaria x ananassa HOM05D006779 ORTHO05D008491 6.7e-60 235.0 264 56.8
FAN24G0787 Fragaria x ananassa HOM05D006779 ORTHO05D008491 8.8e-60 234.6 264 57.2
Migut.B00314 Erythranthe guttata HOM05D006779 ORTHO05D008491 2.0e-59 233.4 261 54.4
PGR142G0644 Punica granatum HOM05D006779 ORTHO05D008491 5.7e-59 231.9 264 59.1
Manes.15G142500 Manihot esculenta HOM05D006779 ORTHO05D008491 1.3e-58 230.7 262 59.9
Cc02_g18560 Coffea canephora HOM05D006779 ORTHO05D008491 1.7e-58 230.3 265 57.0
CSS0011815 Camellia sinensis var. sinensis HOM05D000591 ORTHO05D000579 8.2e-58 228.0 261 55.2
SalBow6G0615 Salvia bowleyana HOM05D006779 ORTHO05D008491 8.2e-58 228.0 262 58.0
Eucgr.I01169 Eucalyptus grandis HOM05D006779 ORTHO05D008491 1.4e-57 227.3 263 55.5
Nitab4.5_0004334g0110 Nicotiana tabacum HOM05D006779 ORTHO05D008491 4.1e-57 225.7 264 54.5
HPP92_004257 Vanilla planifolia HOM05D006779 ORTHO05D008491 4.1e-57 225.7 260 56.2
Lj5C207T4 Lonicera japonica HOM05D006779 ORTHO05D008491 1.2e-56 224.2 258 55.8
MBI02_g21199_MAGBIO Magnolia biondii HOM05D006779 ORTHO05D008491 1.2e-56 224.2 277 57.0
TWI79G0004 Tripterygium wilfordii HOM05D006779 ORTHO05D008491 1.6e-56 223.8 264 58.7
SGA_v2.0_scaffold90G27693 Striga asiatica HOM05D006779 ORTHO05D008491 2.0e-56 223.4 256 50.8
RcHm_v2.0_Chr6g0258731 Rosa chinensis HOM05D006779 ORTHO05D008491 2.7e-56 223.0 264 54.5
Solyc01g108430.3 Solanum lycopersicum HOM05D006779 ORTHO05D008491 4.5e-56 222.2 264 53.4
Glyma.01G146900 Glycine max HOM05D006779 ORTHO05D008491 5.9e-56 221.9 261 56.3
Glyma.10G112900 Glycine max HOM05D006779 ORTHO05D008491 5.9e-56 221.9 261 56.3
PGSC0003DMG400025811 Solanum tuberosum HOM05D006779 ORTHO05D008491 5.9e-56 221.9 264 53.4
DCAR_029018 Daucus carota HOM05D000144 ORTHO05D003364 7.7e-56 221.5 259 56.4
MD05G1075500 Malus domestica HOM05D006779 ORTHO05D008491 1.0e-55 221.1 264 57.6
Atru.chr5.2773 Acer truncatum HOM05D006779 ORTHO05D008491 1.3e-55 220.7 267 57.3
Lalb_Chr09g0328181 Lupinus albus HOM05D006779 ORTHO05D008491 2.2e-55 219.9 262 56.9
Thecc.02G097400 Theobroma cacao HOM05D006779 ORTHO05D008491 2.2e-55 219.9 267 58.4
MSTRG.16763 Avicennia marina HOM05D006779 ORTHO05D008491 2.9e-55 219.5 264 54.9
Sopen01g050660 Solanum pennellii HOM05D006779 ORTHO05D008491 2.9e-55 219.5 264 52.7
Rhsim11G0168500 Rhododendron simsii HOM05D006779 ORTHO05D008491 3.8e-55 219.2 292 49.3
SGA_v2.0_scaffold90G27688 Striga asiatica HOM05D006779 ORTHO05D008491 6.5e-55 218.4 256 50.0
Prupe.8G119200 Prunus persica HOM05D006779 ORTHO05D008491 1.1e-54 217.6 264 57.6
Gohir.A03G191700 Gossypium hirsutum HOM05D006779 ORTHO05D008491 1.9e-54 216.9 267 56.9
Gohir.D02G212600 Gossypium hirsutum HOM05D006779 ORTHO05D008491 2.5e-54 216.5 267 56.6
Nitab4.5_0005583g0020 Nicotiana tabacum HOM05D006779 ORTHO05D008491 2.5e-54 216.5 264 53.8
Ciclev10029963m.g Citrus clementina HOM05D006779 ORTHO05D008491 4.2e-54 215.7 267 56.9
Gorai.005G240600 Gossypium raimondii HOM05D006779 ORTHO05D008491 5.5e-54 215.3 264 56.8
Glyma.02G159500 Glycine max HOM05D006779 ORTHO05D008491 1.2e-53 214.2 261 55.6
Phvul.007G247000 Phaseolus vulgaris HOM05D006779 ORTHO05D008491 1.2e-53 214.2 261 52.9
TWI31G0027 Tripterygium wilfordii HOM05D006779 ORTHO05D008491 2.7e-53 213.0 264 57.2
arahy.Tifrunner.gnm1.ann1.8ZG09Z Arachis hypogaea HOM05D006779 ORTHO05D008491 3.6e-53 212.6 262 53.8
vmacro02181 Vaccinium macrocarpon HOM05D006779 ORTHO05D008491 3.6e-53 212.6 295 47.1
arahy.Tifrunner.gnm1.ann1.T066AP Arachis hypogaea HOM05D006779 ORTHO05D008491 4.7e-53 212.2 262 55.3
COL.COLO4_32686 Corchorus olitorius HOM05D006779 ORTHO05D008491 8.0e-53 211.5 267 56.6
Sc18g0004890 Simmondsia chinensis HOM05D006779 ORTHO05D008491 2.3e-52 209.9 266 57.5
unitig_60.g25783 Utricularia gibba HOM05D006779 ORTHO05D008491 2.6e-51 206.5 257 54.9
Psat7g121840 Pisum sativum HOM05D006779 ORTHO05D008491 4.4e-51 205.7 265 54.7
arahy.Tifrunner.gnm1.ann1.QJKD6Y Arachis hypogaea HOM05D006779 ORTHO05D008491 5.7e-51 205.3 262 54.2
CANSAT25G0176 Cannabis sativa HOM05D006779 ORTHO05D008491 1.3e-50 204.1 265 55.8
Peaxi162Scf00016g01637 Petunia axillaris HOM05D006779 ORTHO05D008491 3.7e-50 202.6 250 54.8
EL10Ac3g06870 Beta vulgaris HOM05D006779 ORTHO05D008491 4.8e-50 202.2 264 53.4
Sp1g36470 Schrenkiella parvula HOM05D006779 ORTHO05D008491 4.8e-50 202.2 257 50.6
Thhalv10011741m.g Eutrema salsugineum HOM05D006779 ORTHO05D008491 6.3e-50 201.8 257 51.4
ClCG02G005780 Citrullus lanatus HOM05D006779 ORTHO05D008491 4.1e-49 199.1 305 49.5
Aa31LG10G4420 Aethionema arabicum HOM05D006779 ORTHO05D008491 4.5e-48 195.7 261 49.8
CAN.G322.16 Capsicum annuum HOM05D006779 ORTHO05D008491 4.5e-48 195.7 264 52.7
Lj4g0006122 Lotus japonicus HOM05D006779 ORTHO05D008491 4.5e-48 195.7 255 54.1
AUR62034187 Chenopodium quinoa HOM05D006779 ORTHO05D008491 5.9e-48 195.3 258 53.9
Ca_18655_v3 Cicer arietinum L. HOM05D006779 ORTHO05D008491 5.9e-48 195.3 261 52.9
ECA234G4762 Erigeron canadensis HOM05D006779 ORTHO05D008491 5.9e-48 195.3 257 50.6
AT1G49590 Arabidopsis thaliana HOM05D006779 ORTHO05D008491 5.0e-47 192.2 256 51.2
A06p03540 Brassica napus HOM05D006779 ORTHO05D008491 2.5e-46 189.9 258 48.4
BolC6t35591H Brassica oleracea HOM05D006779 ORTHO05D008491 2.1e-45 186.8 255 47.8
BraA06t23562Z Brassica rapa HOM05D006779 ORTHO05D008491 2.7e-45 186.4 256 48.0
Lsat_1_v5_gn_5_113321 Lactuca sativa HOM05D006779 ORTHO05D008491 8.8e-44 181.4 254 44.5
AUR62022456 Chenopodium quinoa HOM05D006779 ORTHO05D008491 1.5e-43 180.6 296 47.0
HanXRQChr10g0303251 Helianthus annuus HOM05D006779 ORTHO05D008491 5.7e-43 178.7 261 48.3
CDE06G1966 Ceratophyllum demersum HOM05D006779 ORTHO05D008491 1.3e-42 177.6 259 45.9
BcaNung06359 Brassica carinata HOM05D006779 ORTHO05D008491 2.8e-42 176.4 257 45.9
Carub.0001s3879 Capsella rubella HOM05D006779 ORTHO05D008491 4.9e-42 175.6 257 49.4
Medtr4g086640 Medicago truncatula HOM05D006779 ORTHO05D008491 1.8e-41 173.7 260 50.8
SHI05379 Sapria himalayana HOM05D006779 ORTHO05D008491 1.8e-41 173.7 262 48.9
Ah.04g152710 Amaranthus hybridus HOM05D006779 ORTHO05D008491 3.1e-41 172.9 261 47.5
AL1G56960 Arabidopsis lyrata HOM05D006779 ORTHO05D008491 2.3e-39 166.8 260 48.1
TAR628G0388 Trochodendron aralioides HOM05D006779 ORTHO05D008491 1.1e-38 164.5 112 75.0
Hund00325 Selenicereus undatus HOM05D006779 ORTHO05D008491 2.1e-37 160.2 262 47.3
Mapoly0157s0003 Marchantia polymorpha HOM05D006779 ORTHO05D008491 1.8e-36 157.1 304 41.4
MELO3C018438.2 Cucumis melo HOM05D006779 ORTHO05D008491 5.7e-35 152.1 217 54.8
Zm00001eb373090 Zea mays HOM05D006779 ORTHO05D008491 1.3e-34 151.0 261 47.9
AagrBONN_evm.TU.Sc2ySwM_344.4302 Anthoceros agrestis HOM05D006779 ORTHO05D008491 1.1e-33 147.9 289 42.9
ATR0097G032 Amborella trichopoda HOM05D006779 ORTHO05D008491 5.4e-33 145.6 248 41.9
Cpa.g.sc62.36 Carica papaya HOM05D006779 ORTHO05D008491 7.8e-32 141.7 104 69.2
Pp3c14_26080 Physcomitrium patens HOM05D006779 ORTHO05D008491 5.6e-30 135.6 295 40.3
SMO367G0139 Selaginella moellendorffii HOM05D006779 ORTHO05D008491 6.2e-29 132.1 278 45.3
HPP92_004235 Vanilla planifolia HOM05D006779 ORTHO05D008491 1.8e-28 130.6 214 50.0
CBR_g17671 Chara braunii HOM05D006779 ORTHO05D008491 1.2e-27 127.9 202 47.5
C06p04620 Brassica napus HOM05D006779 ORTHO05D008491 4.4e-27 125.9 212 46.2
Os06g0215200 Oryza sativa ssp. japonica HOM05D006779 ORTHO05D008491 3.2e-25 119.8 70 80.0
TPR.G23511 Trifolium pratense HOM05D006779 ORTHO05D008491 1.2e-24 117.9 70 80.0
FAN20G1913 Fragaria x ananassa HOM05D006779 ORTHO05D008491 1.1e-17 94.7 152 49.3
CSS0024784 Camellia sinensis var. sinensis HOM05D006779 ORTHO05D008491 4.6e-16 89.4 186 38.2
CSS0021002 Camellia sinensis var. sinensis HOM05D006779 ORTHO05D008491 3.9e-15 86.3 186 37.1
CARHR039640 Cardamine hirsuta HOM05D006779 ORTHO05D008491 2.5e-14 83.6 146 50.0
CDE03G0027 Ceratophyllum demersum HOM05D006779 ORTHO05D008491 1.1e-12 78.2 259 31.7
AUR62042088 Chenopodium quinoa HOM05D006779 ORTHO05D008491 8.9e-12 75.1 207 39.1
TPR.G23531 Trifolium pratense HOM05D006779 ORTHO05D008491 8.9e-12 75.1 144 47.2
TAR628G1516 Trochodendron aralioides HOM05D006779 ORTHO05D008491 1.7e-10 70.9 123 58.5
EL10Ac9g20940 Beta vulgaris HOM05D002686 ORTHO05D003222 1.5e-06 57.8 61 57.4
CSS0022737 Camellia sinensis var. sinensis HOM05D006779 ORTHO05D008491 3.3e-06 56.6 182 30.2


User provided reference genes

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