Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO478G4925 Papaver somniferum HOM05D006136 ORTHO05D007244 0.0e+00 1396.7 733 100.0
PSO782G1690 Papaver somniferum HOM05D006136 ORTHO05D007244 0.0e+00 1333.5 732 95.4
TAR626G0660 Trochodendron aralioides HOM05D006136 ORTHO05D007244 3.1e-102 377.1 715 38.9
Aqoxy7G02564 Aquilegia oxysepala HOM05D006136 ORTHO05D007244 1.1e-94 352.1 804 34.8
Dinv12632 Davidia involucrata HOM05D006136 ORTHO05D002774 2.5e-88 330.9 621 38.0
QL11p005727 Quercus lobata HOM05D006136 ORTHO05D007244 6.9e-86 322.8 798 33.5
Cfa012873 Carpinus fangiana HOM05D006136 ORTHO05D007244 2.5e-83 314.3 731 35.4
Cpa.g.sc46.113 Carica papaya HOM05D006136 ORTHO05D007244 6.7e-81 306.2 783 33.5
QL05p072260 Quercus lobata HOM05D000321 ORTHO05D007244 1.3e-79 302.0 404 45.0
Lj9A583T57 Lonicera japonica HOM05D006136 ORTHO05D007244 4.1e-78 297.0 767 33.2
Eucgr.C02149 Eucalyptus grandis HOM05D006136 ORTHO05D007244 3.2e-75 287.3 730 34.7
Nn5g26953 Nelumbo nucifera HOM05D006136 ORTHO05D007244 1.2e-74 285.4 474 42.6
CSS0019621 Camellia sinensis var. sinensis HOM05D006136 ORTHO05D007244 3.6e-74 283.9 438 40.9
CSS0003139 Camellia sinensis var. sinensis HOM05D006136 ORTHO05D007244 4.6e-74 283.5 723 32.2
Glyma.09G084800 Glycine max HOM05D006136 ORTHO05D007244 1.8e-73 281.6 724 32.5
MBI16_g40727_MAGBIO Magnolia biondii HOM05D006136 ORTHO05D007244 1.1e-72 278.9 470 41.1
GSVIVG01038350001 Vitis vinifera HOM05D006136 ORTHO05D007244 1.5e-72 278.5 724 31.9
arahy.Tifrunner.gnm1.ann1.46MDAV Arachis hypogaea HOM05D006136 ORTHO05D007244 2.5e-72 277.7 718 33.3
Ciclev10007497m.g Citrus clementina HOM05D006136 ORTHO05D007244 1.7e-71 275.0 826 32.4
Oeu000955.1 Olea europaea HOM05D006136 ORTHO05D007244 1.4e-70 271.9 718 33.4
Glyma.15G193100 Glycine max HOM05D006136 ORTHO05D007244 1.8e-70 271.6 730 32.5
CiPaw.07G237600 Carya illinoinensis HOM05D006136 ORTHO05D007244 2.4e-70 271.2 734 33.0
TWI32G0914 Tripterygium wilfordii HOM05D006136 ORTHO05D007244 1.2e-69 268.9 736 32.3
MSTRG.26507 Avicennia marina HOM05D006136 ORTHO05D007244 5.0e-68 263.5 725 30.6
MD04G1000700 Malus domestica HOM05D006136 ORTHO05D007244 5.0e-68 263.5 767 31.8
Phvul.009G217200 Phaseolus vulgaris HOM05D006136 ORTHO05D007244 3.6e-66 257.3 729 32.0
Atru.chr7.1014 Acer truncatum HOM05D006136 ORTHO05D007244 7.9e-66 256.1 828 30.3
Nitab4.5_0000807g0150 Nicotiana tabacum HOM05D006136 ORTHO05D007244 1.8e-65 255.0 773 30.3
Sc06g0001020 Simmondsia chinensis HOM05D006136 ORTHO05D007244 3.0e-65 254.2 751 29.8
Prupe.1G000700 Prunus persica HOM05D006136 ORTHO05D007244 1.1e-64 252.3 745 32.3
Sp6g19810 Schrenkiella parvula HOM05D006136 ORTHO05D007244 9.7e-64 249.2 735 32.2
Nitab4.5_0000170g0140 Nicotiana tabacum HOM05D006136 ORTHO05D007244 1.7e-63 248.4 768 31.0
Manes.11G052190 Manihot esculenta HOM05D006136 ORTHO05D007244 2.2e-63 248.1 721 30.5
Os02g0138200 Oryza sativa ssp. japonica HOM05D006136 ORTHO05D007244 2.8e-63 247.7 502 36.7
Peaxi162Scf00474g00018 Petunia axillaris HOM05D006136 ORTHO05D007244 4.8e-63 246.9 770 30.1
Zm00001eb209220 Zea mays HOM05D006136 ORTHO05D007244 8.2e-63 246.1 507 35.1
FAN17G2087 Fragaria x ananassa HOM05D006136 ORTHO05D007244 1.1e-62 245.7 747 31.7
RcHm_v2.0_Chr4g0384741 Rosa chinensis HOM05D006136 ORTHO05D007244 1.4e-62 245.4 743 31.2
PGSC0003DMG400013541 Solanum tuberosum HOM05D006136 ORTHO05D007244 1.8e-62 245.0 758 30.1
Manes.02G224001 Manihot esculenta HOM05D006136 ORTHO05D007244 5.3e-62 243.4 434 37.8
ECA234G2139 Erigeron canadensis HOM05D006136 ORTHO05D007244 7.0e-62 243.0 743 31.6
HPP92_017041 Vanilla planifolia HOM05D006136 ORTHO05D007244 9.1e-62 242.7 485 37.3
DCAR_020445 Daucus carota HOM05D006136 ORTHO05D002774 1.5e-61 241.9 784 31.2
Potri.018G151300 Populus trichocarpa HOM05D006136 ORTHO05D007244 2.0e-61 241.5 538 35.5
EL10Ac2g03821 Beta vulgaris HOM05D006136 ORTHO05D007244 4.5e-61 240.4 769 29.6
Lj6g0010551 Lotus japonicus HOM05D006136 ORTHO05D007244 8.5e-60 236.1 730 30.0
AUR62009114 Chenopodium quinoa HOM05D000163 ORTHO05D007244 2.5e-59 234.6 768 29.9
ClCG03G011600 Citrullus lanatus HOM05D006136 ORTHO05D007244 2.5e-59 234.6 732 28.8
Cc06_g23510 Coffea canephora HOM05D006136 ORTHO05D007244 3.2e-59 234.2 584 33.7
SalBow5G5580 Salvia bowleyana HOM05D006136 ORTHO05D007244 3.2e-59 234.2 735 29.8
Actinidia33603 Actinidia chinensis HOM05D006136 ORTHO05D007244 4.2e-59 233.8 267 49.8
Migut.L01610 Erythranthe guttata HOM05D006136 ORTHO05D007244 9.4e-59 232.6 737 29.2
Thhalv10012942m.g Eutrema salsugineum HOM05D006136 ORTHO05D007244 9.4e-59 232.6 756 29.9
VMungo1309G0146 Vigna mungo HOM05D006136 ORTHO05D007244 9.4e-59 232.6 728 31.2
Sabra18G0127000 Salix brachista HOM05D006136 ORTHO05D007244 4.7e-58 230.3 538 34.2
Lalb_Chr08g0233201 Lupinus albus HOM05D006136 ORTHO05D007244 6.1e-58 229.9 722 29.8
CsaV3_1G044190 Cucumis sativus L. HOM05D006136 ORTHO05D007244 1.1e-56 225.7 725 27.6
MELO3C010014.2 Cucumis melo HOM05D006136 ORTHO05D007244 3.3e-56 224.2 731 28.0
vmacro17832 Vaccinium macrocarpon HOM05D006136 ORTHO05D007244 3.3e-56 224.2 767 30.1
Psat1g019160 Pisum sativum HOM05D006136 ORTHO05D007244 4.4e-56 223.8 742 30.2
Sopen07g022390 Solanum pennellii HOM05D006136 ORTHO05D007244 9.7e-56 222.6 829 27.6
unitig_699.g19255 Utricularia gibba HOM05D006136 ORTHO05D007244 9.7e-56 222.6 449 35.0
Lsat_1_v5_gn_5_82020 Lactuca sativa HOM05D006136 ORTHO05D007244 2.8e-55 221.1 495 35.8
CARHR271930 Cardamine hirsuta HOM05D006136 ORTHO05D007244 3.7e-55 220.7 811 29.7
AUR62039148 Chenopodium quinoa HOM05D006136 ORTHO05D007244 6.3e-55 219.9 778 29.0
Rhsim08G0117200 Rhododendron simsii HOM05D006136 ORTHO05D007244 6.3e-55 219.9 798 29.1
ATR0626G098 Amborella trichopoda HOM05D006136 ORTHO05D007244 8.2e-55 219.5 501 35.1
Ca_02520_v3 Cicer arietinum L. HOM05D006136 ORTHO05D007244 1.8e-54 218.4 442 34.4
Haze_21244 Corylus avellana HOM05D006136 ORTHO05D007244 1.8e-54 218.4 658 32.1
AL8G34230 Arabidopsis lyrata HOM05D006136 ORTHO05D007244 4.1e-54 217.2 812 28.0
Aa31LG3G13960 Aethionema arabicum HOM05D006136 ORTHO05D007244 9.1e-54 216.1 461 35.1
FAN12G3399 Fragaria x ananassa HOM05D006136 ORTHO05D007244 1.6e-53 215.3 433 35.8
Gohir.A08G016500 Gossypium hirsutum HOM05D006136 ORTHO05D007244 2.0e-53 214.9 758 30.1
Gohir.D08G026500 Gossypium hirsutum HOM05D006136 ORTHO05D007244 2.0e-53 214.9 797 29.0
HanXRQChr10g0309281 Helianthus annuus HOM05D006136 ORTHO05D007244 2.0e-53 214.9 727 29.2
COL.COLO4_09001 Corchorus olitorius HOM05D006136 ORTHO05D007244 2.6e-53 214.5 737 29.4
Gorai.004G023000 Gossypium raimondii HOM05D006136 ORTHO05D007244 3.5e-53 214.2 797 29.1
FAN12G0507 Fragaria x ananassa HOM05D006136 ORTHO05D007244 7.7e-53 213.0 754 29.6
THA.LOC104803376 Tarenaya hassleriana HOM05D006136 ORTHO05D007244 1.7e-52 211.8 780 29.7
PGR044G0474 Punica granatum HOM05D006136 ORTHO05D007244 2.9e-52 211.1 735 29.0
FAN22G1396 Fragaria x ananassa HOM05D006136 ORTHO05D007244 1.9e-51 208.4 634 30.8
Medtr2g048340 Medicago truncatula HOM05D006136 ORTHO05D007244 9.4e-51 206.1 747 29.9
AT5G58130 Arabidopsis thaliana HOM05D006136 ORTHO05D007244 4.7e-50 203.8 832 26.2
BcaB08g36165 Brassica carinata HOM05D006136 ORTHO05D007244 1.4e-49 202.2 444 34.7
Duzib170G0744 Durio zibethinus HOM05D006136 ORTHO05D007244 3.0e-49 201.1 743 30.4
Thecc.09G202200 Theobroma cacao HOM05D006136 ORTHO05D007244 5.2e-49 200.3 800 27.5
BraA10t43623Z Brassica rapa HOM05D006136 ORTHO05D007244 2.0e-48 198.4 441 34.0
A10p16060 Brassica napus HOM05D006136 ORTHO05D007244 5.7e-48 196.8 436 33.9
CANSAT01G2594 Cannabis sativa HOM05D006136 ORTHO05D007244 2.8e-47 194.5 730 27.9
BolC9t57856H Brassica oleracea HOM05D006136 ORTHO05D007244 1.3e-44 185.7 778 26.7
C09p50030 Brassica napus HOM05D006136 ORTHO05D007244 2.9e-44 184.5 779 26.7
SEGI_05126 Sequoiadendron giganteum HOM05D006136 ORTHO05D007244 2.9e-44 184.5 226 46.0
TPR.G18712 Trifolium pratense HOM05D006136 ORTHO05D007244 2.9e-44 184.5 369 36.3
BcaC04g19905 Brassica carinata HOM05D006136 ORTHO05D007244 6.5e-44 183.3 781 26.9
Carub.0008s1868 Capsella rubella HOM05D006136 ORTHO05D007244 6.5e-44 183.3 826 26.5
CDE05G3219 Ceratophyllum demersum HOM05D006136 ORTHO05D007244 7.5e-40 169.9 429 33.1
Solyc07g042740.3 Solanum lycopersicum HOM05D006136 ORTHO05D007244 8.6e-36 156.4 212 42.0
GSVIVG01038333001 Vitis vinifera HOM05D006136 ORTHO05D007244 1.6e-34 152.1 189 46.6
SGA_v2.0_scaffold21G09584 Striga asiatica HOM05D006136 ORTHO05D007244 4.7e-34 150.6 741 27.0
RcHm_v2.0_Chr5g0003141 Rosa chinensis HOM05D006136 ORTHO05D007244 8.0e-34 149.8 676 28.7
PGR044G0304 Punica granatum HOM05D006136 ORTHO05D007244 8.9e-33 146.4 257 38.9
arahy.Tifrunner.gnm1.ann1.27MYTD Arachis hypogaea HOM05D006136 ORTHO05D007244 2.6e-32 144.8 139 57.6
arahy.Tifrunner.gnm1.ann1.QC7K1D Arachis hypogaea HOM05D006136 ORTHO05D007244 1.6e-29 135.6 93 69.9
arahy.Tifrunner.gnm1.ann1.Q88MA9 Arachis hypogaea HOM05D006136 ORTHO05D007244 1.3e-28 132.5 93 66.7
Lj1g0026291 Lotus japonicus HOM05D006136 ORTHO05D007244 1.2e-26 125.9 307 31.9
SMO367G1245 Selaginella moellendorffii HOM05D006136 ORTHO05D007244 2.8e-26 124.8 737 26.3
Mapoly0169s0023 Marchantia polymorpha HOM05D006136 ORTHO05D007244 3.1e-25 121.3 271 32.5
AagrBONN_evm.TU.Sc2ySwM_228.2439 Anthoceros agrestis HOM05D006136 ORTHO05D007244 3.9e-20 104.4 211 33.2
Pp3c1_8430 Physcomitrium patens HOM05D006136 ORTHO05D007244 9.5e-19 99.8 160 40.6
Glyma.07G231200 Glycine max HOM05D003235 ORTHO05D007244 7.0e-14 83.6 78 46.2
arahy.Tifrunner.gnm1.ann1.SWI1TY Arachis hypogaea HOM05D006136 ORTHO05D007244 1.0e-12 79.7 82 48.8
CBR_g39420 Chara braunii HOM05D006136 ORTHO05D007244 8.6e-12 76.6 227 30.8
Hma1.2p1_2895F.1_g329976 Hydrangea macrophylla HOM05D006136 ORTHO05D007244 5.6e-11 73.9 57 57.9
BcaC03g14120 Brassica carinata HOM05D009052 ORTHO05D011796 5.2e-09 67.4 82 51.2
C02p13590 Brassica napus HOM05D006136 ORTHO05D007244 8.9e-09 66.6 82 51.2
BolC2t07471H Brassica oleracea HOM05D006136 ORTHO05D007244 8.9e-09 66.6 82 51.2
TPR.G20669 Trifolium pratense HOM05D006136 ORTHO05D007244 2.0e-08 65.5 69 52.2
Cre14.g633400 Chlamydomonas reinhardtii HOM05D006136 ORTHO05D007244 3.4e-08 64.7 131 32.1
Sed0020259 Sechium edule HOM05D006136 ORTHO05D007244 7.5e-08 63.5 530 23.4
MBI16_g40728_MAGBIO Magnolia biondii HOM05D006136 ORTHO05D007244 2.4e-06 58.5 40 62.5
FvH4_4g00130 Fragaria vesca HOM05D006136 ORTHO05D007244 9.2e-06 56.6 495 25.7


User provided reference genes

Program Settings