Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO170G6210 Papaver somniferum HOM05D005384 ORTHO05D006477 3.6e-146 522.3 445 100.0
PSO063G3637 Papaver somniferum HOM05D005384 ORTHO05D006477 3.3e-38 163.7 507 30.0
PSO782G4681 Papaver somniferum HOM05D005384 ORTHO05D006477 3.3e-38 163.7 506 29.8
PSO063G4288 Papaver somniferum HOM05D002729 ORTHO05D305335 8.0e-37 159.1 164 59.1
PSO170G3342 Papaver somniferum HOM05D002729 ORTHO05D305508 3.0e-36 157.1 164 58.5
FAN03G3298 Fragaria x ananassa HOM05D005384 ORTHO05D006477 1.0e-23 115.5 509 24.4
Aqoxy2G03702_Aqoxy2G03703 Aquilegia oxysepala HOM05D005384 ORTHO05D006477 9.5e-22 109.0 482 29.7
Aqoxy3G02532 Aquilegia oxysepala HOM05D005384 ORTHO05D006477 9.5e-22 109.0 484 29.8
Prupe.2G049800 Prunus persica HOM05D005384 ORTHO05D006477 9.5e-22 109.0 150 44.7
TAR629G1600 Trochodendron aralioides HOM05D005384 ORTHO05D006477 6.2e-21 106.3 516 24.4
Ciclev10010959m.g Citrus clementina HOM05D005384 ORTHO05D006477 1.4e-20 105.1 511 24.3
CiPaw.03G076200 Carya illinoinensis HOM05D005384 ORTHO05D006477 1.8e-20 104.8 475 25.7
Atru.chr1.2109 Acer truncatum HOM05D005384 ORTHO05D006477 8.9e-20 102.4 502 25.3
MD00G1152000 Malus domestica HOM05D005384 ORTHO05D006477 1.5e-19 101.7 148 43.9
Duzib133G1182 Durio zibethinus HOM05D005384 ORTHO05D006477 2.6e-19 100.9 148 43.2
RcHm_v2.0_Chr1g0329501 Rosa chinensis HOM05D005384 ORTHO05D006477 2.6e-19 100.9 509 23.8
Oeu024119.2 Olea europaea HOM05D005384 ORTHO05D006477 3.4e-19 100.5 138 42.8
Glyma.08G266700 Glycine max HOM05D005384 ORTHO05D006477 5.8e-19 99.8 135 43.0
Lj2A247G82 Lonicera japonica HOM05D005384 ORTHO05D006477 5.8e-19 99.8 143 44.8
Oeu054547.2 Olea europaea HOM05D005384 ORTHO05D006477 5.8e-19 99.8 128 43.8
Glyma.16G102300 Glycine max HOM05D005384 ORTHO05D006477 7.5e-19 99.4 135 43.7
MD02G1270000 Malus domestica HOM05D005384 ORTHO05D006477 7.5e-19 99.4 486 25.1
Phvul.003G273500 Phaseolus vulgaris HOM05D005384 ORTHO05D006477 7.5e-19 99.4 136 43.4
MSTRG.2272 Avicennia marina HOM05D005384 ORTHO05D006477 1.3e-18 98.6 474 25.5
FvH4_7g04410 Fragaria vesca HOM05D005384 ORTHO05D006477 3.7e-18 97.1 481 24.3
Sabra17G0116500 Salix brachista HOM05D005384 ORTHO05D006477 6.4e-18 96.3 491 23.6
FAN06G1991 Fragaria x ananassa HOM05D005384 ORTHO05D006477 8.3e-18 95.9 483 24.6
VMungo0251G2756 Vigna mungo HOM05D005384 ORTHO05D006477 1.9e-17 94.7 135 42.2
COL.COLO4_24446 Corchorus olitorius HOM05D005384 ORTHO05D006477 2.4e-17 94.4 124 45.2
Sabra17G0113100 Salix brachista HOM05D005384 ORTHO05D006477 3.2e-17 94.0 491 23.4
FAN01G0265 Fragaria x ananassa HOM05D005384 ORTHO05D006477 5.4e-17 93.2 479 26.9
Dinv05843 Davidia involucrata HOM05D005384 ORTHO05D006477 7.1e-17 92.8 505 26.7
Lalb_Chr05g0228951 Lupinus albus HOM05D005384 ORTHO05D006477 3.5e-16 90.5 137 39.4
CSS0046614 Camellia sinensis var. sinensis HOM05D005384 ORTHO05D006477 4.6e-16 90.1 146 41.8
THA.LOC104801042 Tarenaya hassleriana HOM05D005384 ORTHO05D006477 6.0e-16 89.7 147 40.8
Sabra17G0115200 Salix brachista HOM05D005384 ORTHO05D006477 1.0e-15 89.0 491 23.0
Dinv07851 Davidia involucrata HOM05D005384 ORTHO05D006477 1.5e-14 85.1 509 22.4
Psat4g111160 Pisum sativum HOM05D005384 ORTHO05D006477 2.5e-14 84.3 135 38.5
Hund21526 Selenicereus undatus HOM05D005384 ORTHO05D006477 2.5e-14 84.3 150 40.7
GSVIVG01013204001 Vitis vinifera HOM05D005384 ORTHO05D006477 2.5e-14 84.3 188 32.4
vmacro14142 Vaccinium macrocarpon HOM05D005384 ORTHO05D006477 3.3e-14 84.0 182 32.4
Aa31LG10G6030 Aethionema arabicum HOM05D005384 ORTHO05D006477 4.3e-14 83.6 148 37.2
CSS0000239 Camellia sinensis var. sinensis HOM05D005384 ORTHO05D006477 5.6e-14 83.2 479 26.9
Migut.E00282 Erythranthe guttata HOM05D005384 ORTHO05D006477 5.6e-14 83.2 151 39.1
Nitab4.5_0009567g0040 Nicotiana tabacum HOM05D005384 ORTHO05D006477 5.6e-14 83.2 117 41.0
FAN10G2966 Fragaria x ananassa HOM05D005384 ORTHO05D006477 9.5e-14 82.4 481 25.2
Sed0018353 Sechium edule HOM05D005384 ORTHO05D006477 9.5e-14 82.4 146 37.7
Manes.02G081900 Manihot esculenta HOM05D005384 ORTHO05D006477 1.2e-13 82.0 183 32.8
ATR0743G115 Amborella trichopoda HOM05D005384 ORTHO05D006477 1.6e-13 81.6 117 40.2
Sp5g08170 Schrenkiella parvula HOM05D005384 ORTHO05D006477 1.6e-13 81.6 146 39.0
Thhalv10010093m.g Eutrema salsugineum HOM05D005384 ORTHO05D006477 2.1e-13 81.3 146 37.7
Gohir.D12G051100 Gossypium hirsutum HOM05D005384 ORTHO05D006477 2.8e-13 80.9 148 38.5
Lalb_Chr16g0391981 Lupinus albus HOM05D005384 ORTHO05D006477 2.8e-13 80.9 505 24.4
PSO782G2179 Papaver somniferum HOM05D005384 ORTHO05D006477 3.6e-13 80.5 156 33.3
QL02p064091 Quercus lobata HOM05D005384 ORTHO05D006477 3.6e-13 80.5 183 31.7
Gohir.A08G038300 Gossypium hirsutum HOM05D005384 ORTHO05D006477 4.7e-13 80.1 148 39.2
Lj3C397G6 Lonicera japonica HOM05D005384 ORTHO05D006477 4.7e-13 80.1 116 40.5
Lj4g0003244 Lotus japonicus HOM05D005384 ORTHO05D006477 4.7e-13 80.1 501 25.9
TAR636G3654 Trochodendron aralioides HOM05D005384 ORTHO05D006477 4.7e-13 80.1 112 42.0
CsaV3_5G020310 Cucumis sativus L. HOM05D005384 ORTHO05D006477 1.1e-12 79.0 146 36.3
TPR.G28960 Trifolium pratense HOM05D005384 ORTHO05D006477 1.1e-12 79.0 188 30.9
Sopen08g025890 Solanum pennellii HOM05D005384 ORTHO05D006477 1.4e-12 78.6 468 24.4
Potri.017G138500 Populus trichocarpa HOM05D005384 ORTHO05D006477 1.8e-12 78.2 491 21.8
Solyc08g077310.3 Solanum lycopersicum HOM05D005384 ORTHO05D006477 1.8e-12 78.2 467 23.3
CARHR164150 Cardamine hirsuta HOM05D005384 ORTHO05D006477 2.3e-12 77.8 146 37.0
DCAR_016228 Daucus carota HOM05D005384 ORTHO05D006477 2.3e-12 77.8 178 29.2
Actinidia10880 Actinidia chinensis HOM05D005384 ORTHO05D006477 3.1e-12 77.4 118 42.4
AL5G35270 Arabidopsis lyrata HOM05D005384 ORTHO05D006477 4.0e-12 77.0 146 37.0
Gorai.008G054400 Gossypium raimondii HOM05D005384 ORTHO05D006477 4.0e-12 77.0 116 39.7
ClCG01G008440 Citrullus lanatus HOM05D005384 ORTHO05D006477 5.2e-12 76.6 146 35.6
Thecc.04G058100 Theobroma cacao HOM05D005384 ORTHO05D006477 5.2e-12 76.6 146 37.7
Haze_14319 Corylus avellana HOM05D005384 ORTHO05D006477 6.8e-12 76.3 190 31.1
CANSAT25G0269 Cannabis sativa HOM05D005384 ORTHO05D006477 8.9e-12 75.9 485 26.0
ECA246G0264 Erigeron canadensis HOM05D005384 ORTHO05D006477 8.9e-12 75.9 115 40.0
SGA_v2.0_scaffold14G06795 Striga asiatica HOM05D005384 ORTHO05D006477 1.2e-11 75.5 144 36.8
Gohir.A12G052600 Gossypium hirsutum HOM05D005384 ORTHO05D006477 1.5e-11 75.1 148 36.5
PSO063G2107 Papaver somniferum HOM05D005384 ORTHO05D006477 1.5e-11 75.1 142 33.8
Actinidia22110 Actinidia chinensis HOM05D005384 ORTHO05D006477 2.0e-11 74.7 144 38.9
Medtr8g070990 Medicago truncatula HOM05D005384 ORTHO05D006477 2.6e-11 74.3 505 24.2
Potri.004G081800 Populus trichocarpa HOM05D005384 ORTHO05D006477 2.6e-11 74.3 146 36.3
Sabra04G0054400 Salix brachista HOM05D005384 ORTHO05D006477 2.6e-11 74.3 493 22.1
Peaxi162Scf00084g00818 Petunia axillaris HOM05D005384 ORTHO05D006477 3.4e-11 73.9 113 38.1
Eucgr.J01644 Eucalyptus grandis HOM05D005384 ORTHO05D006477 5.8e-11 73.2 502 22.5
EL10Ac8g19736 Beta vulgaris HOM05D005384 ORTHO05D006477 9.9e-11 72.4 160 37.5
Gohir.D08G048500 Gossypium hirsutum HOM05D005384 ORTHO05D006477 9.9e-11 72.4 148 36.5
CAN.G572.37 Capsicum annuum HOM05D005384 ORTHO05D006477 2.2e-10 71.2 140 37.1
AagrBONN_evm.TU.Sc2ySwM_228.1178 Anthoceros agrestis HOM05D005384 ORTHO05D006477 2.9e-10 70.9 132 37.1
Nitab4.5_0002055g0100 Nicotiana tabacum HOM05D005384 ORTHO05D006477 2.9e-10 70.9 144 37.5
CiPaw.04G049200 Carya illinoinensis HOM05D005384 ORTHO05D006477 3.7e-10 70.5 146 34.2
Cc04_g13050 Coffea canephora HOM05D005384 ORTHO05D006477 3.7e-10 70.5 92 37.0
Rhsim07G0122100 Rhododendron simsii HOM05D005384 ORTHO05D006477 4.9e-10 70.1 153 35.3
CSS0043592 Camellia sinensis var. sinensis HOM05D005384 ORTHO05D006477 6.4e-10 69.7 146 36.3
Gorai.004G048000 Gossypium raimondii HOM05D005384 ORTHO05D006477 6.4e-10 69.7 148 35.8
unitig_21.g20863 Utricularia gibba HOM05D005384 ORTHO05D006477 6.4e-10 69.7 90 47.8
arahy.Tifrunner.gnm1.ann1.R6E3N5 Arachis hypogaea HOM05D005384 ORTHO05D006477 8.4e-10 69.3 135 34.1
PGR042G2720 Punica granatum HOM05D005384 ORTHO05D006477 3.2e-09 67.4 174 33.3
HanXRQChr17g0535751 Helianthus annuus HOM05D005384 ORTHO05D006477 5.4e-09 66.6 115 35.7
BolC8t50551H Brassica oleracea HOM05D005384 ORTHO05D006477 9.2e-09 65.9 120 34.2
Cpa.g.c37843 Carica papaya HOM05D005384 ORTHO05D006477 9.2e-09 65.9 87 40.2
MELO3C025104.2 Cucumis melo HOM05D005384 ORTHO05D006477 1.2e-08 65.5 189 28.6
BraA09t40184Z Brassica rapa HOM05D005384 ORTHO05D006477 1.6e-08 65.1 118 34.7
CDE12G0199 Ceratophyllum demersum HOM05D005384 ORTHO05D006477 1.6e-08 65.1 117 33.3
C08p29480 Brassica napus HOM05D005384 ORTHO05D006477 3.5e-08 63.9 117 33.3
Lsat_1_v5_gn_3_16520 Lactuca sativa HOM05D005384 ORTHO05D006477 3.5e-08 63.9 177 31.6
arahy.Tifrunner.gnm1.ann1.EB4ABC Arachis hypogaea HOM05D005384 ORTHO05D006477 7.8e-08 62.8 135 32.6
Pp3c10_21700 Physcomitrium patens HOM05D005384 ORTHO05D006477 1.0e-07 62.4 152 32.9
Sc22g0001400 Simmondsia chinensis HOM05D005384 ORTHO05D006477 1.0e-07 62.4 135 33.3
CDE06G0914 Ceratophyllum demersum HOM05D005384 ORTHO05D006477 3.9e-07 60.5 186 30.6
PSO724G0625 Papaver somniferum HOM05D005384 ORTHO05D006477 3.9e-07 60.5 141 32.6
AUR62027521 Chenopodium quinoa HOM05D005384 ORTHO05D006477 6.6e-07 59.7 125 37.6
Zm00001eb361710 Zea mays HOM05D005384 ORTHO05D006477 6.6e-07 59.7 175 32.0
Os02g0167500 Oryza sativa ssp. japonica HOM05D005384 ORTHO05D006477 1.5e-06 58.5 124 32.3
BcaNung06989 Brassica carinata HOM05D005384 ORTHO05D006477 4.3e-06 57.0 148 33.1
A09p47220 Brassica napus HOM05D005384 ORTHO05D006477 4.3e-06 57.0 115 32.2
SEGI_21581 Sequoiadendron giganteum HOM05D005384 ORTHO05D006477 4.3e-06 57.0 137 30.7
Cpa.g.sc765.1 Carica papaya HOM05D005384 ORTHO05D006477 7.3e-06 56.2 83 41.0


User provided reference genes

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