Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO063G3689 Papaver somniferum HOM05D005238 ORTHO05D006337 4.5e-77 291.2 147 100.0
PSO170G6647 Papaver somniferum HOM05D005238 ORTHO05D006337 1.8e-30 136.3 75 90.7
PSO782G5275 Papaver somniferum HOM05D005238 ORTHO05D006337 7.0e-30 134.4 75 89.3
Manes.14G016200 Manihot esculenta HOM05D005238 ORTHO05D006337 1.9e-19 99.8 82 63.4
MBI16_g40051_MAGBIO Magnolia biondii HOM05D005238 ORTHO05D006337 4.2e-19 98.6 82 62.2
Nn6g31521 Nelumbo nucifera HOM05D005238 ORTHO05D006337 7.2e-19 97.8 79 64.6
Potri.011G143100 Populus trichocarpa HOM05D005238 ORTHO05D006337 1.6e-18 96.7 82 61.0
arahy.Tifrunner.gnm1.ann1.7NR7Q4 Arachis hypogaea HOM05D005238 ORTHO05D006337 2.1e-18 96.3 82 59.8
Prupe.4G139800 Prunus persica HOM05D005238 ORTHO05D006337 2.8e-18 95.9 80 62.5
Sabra11G0127900 Salix brachista HOM05D001622 ORTHO05D007320 6.1e-18 94.7 82 59.8
GSVIVG01020424001 Vitis vinifera HOM05D005238 ORTHO05D006337 6.1e-18 94.7 82 58.5
CDE01G0718 Ceratophyllum demersum HOM05D005238 ORTHO05D006337 8.0e-18 94.4 83 62.7
Duzib213G1032 Durio zibethinus HOM05D005238 ORTHO05D006337 1.0e-17 94.0 82 58.5
TWI39G0564 Tripterygium wilfordii HOM05D005238 ORTHO05D006337 1.0e-17 94.0 79 60.8
CSS0017399 Camellia sinensis var. sinensis HOM05D005238 ORTHO05D006337 1.4e-17 93.6 82 58.5
CSS0024118 Camellia sinensis var. sinensis HOM05D005238 ORTHO05D006337 1.4e-17 93.6 82 58.5
Gohir.D01G026750 Gossypium hirsutum HOM05D005238 ORTHO05D006337 1.4e-17 93.6 83 60.2
Gohir.D01G026800 Gossypium hirsutum HOM05D005238 ORTHO05D006337 1.4e-17 93.6 83 60.2
CDE12G0696 Ceratophyllum demersum HOM05D005238 ORTHO05D006337 1.8e-17 93.2 83 62.7
Ca_03677_v3 Cicer arietinum L. HOM05D005238 ORTHO05D006337 1.8e-17 93.2 82 56.1
Manes.06G171800 Manihot esculenta HOM05D005238 ORTHO05D006337 1.8e-17 93.2 82 58.5
Phvul.005G056900 Phaseolus vulgaris HOM05D005238 ORTHO05D006337 1.8e-17 93.2 81 59.3
TWI38G1616 Tripterygium wilfordii HOM05D005238 ORTHO05D006337 1.8e-17 93.2 79 62.0
Glyma.15G255400 Glycine max HOM05D005238 ORTHO05D006337 4.0e-17 92.0 82 56.1
vmacro11663 Vaccinium macrocarpon HOM05D005238 ORTHO05D006337 5.2e-17 91.7 82 58.5
Atru.chr2.1794 Acer truncatum HOM05D005238 ORTHO05D006337 6.8e-17 91.3 82 61.0
QL04p073782 Quercus lobata HOM05D005238 ORTHO05D006337 6.8e-17 91.3 82 57.3
arahy.Tifrunner.gnm1.ann1.K2PXHZ Arachis hypogaea HOM05D005238 ORTHO05D006337 8.9e-17 90.9 82 57.3
Glyma.08G172000 Glycine max HOM05D005238 ORTHO05D006337 8.9e-17 90.9 82 54.9
MD10G1202400 Malus domestica HOM05D005238 ORTHO05D006337 8.9e-17 90.9 80 61.2
Medtr2g069490 Medicago truncatula HOM05D005238 ORTHO05D006337 1.2e-16 90.5 82 57.3
Psat1g011080 Pisum sativum HOM05D005238 ORTHO05D006337 1.5e-16 90.1 82 56.1
TAR627G0595 Trochodendron aralioides HOM05D005238 ORTHO05D006337 1.5e-16 90.1 82 58.5
VMungo1080G1161 Vigna mungo HOM05D005238 ORTHO05D006337 1.5e-16 90.1 81 56.8
Gohir.D13G157300 Gossypium hirsutum HOM05D005238 ORTHO05D006337 2.0e-16 89.7 82 57.3
Gorai.013G178100 Gossypium raimondii HOM05D005238 ORTHO05D006337 2.0e-16 89.7 82 57.3
ATR1136G058 Amborella trichopoda HOM05D005238 ORTHO05D006337 2.6e-16 89.4 82 56.1
Dinv42511 Davidia involucrata HOM05D005238 ORTHO05D006337 2.6e-16 89.4 81 55.6
Eucgr.F03179 Eucalyptus grandis HOM05D005238 ORTHO05D006337 2.6e-16 89.4 82 57.3
Duzib187G0607 Durio zibethinus HOM05D005238 ORTHO05D006337 3.4e-16 89.0 81 56.8
Rhsim06G0238800 Rhododendron simsii HOM05D005238 ORTHO05D006337 3.4e-16 89.0 82 56.1
Hma1.2p1_0637F.1_g193540 Hydrangea macrophylla HOM05D005238 ORTHO05D006337 4.4e-16 88.6 82 58.5
Lj3g0001441 Lotus japonicus HOM05D005238 ORTHO05D006337 4.4e-16 88.6 82 54.9
PGSC0003DMG400011240 Solanum tuberosum HOM05D005238 ORTHO05D006337 5.7e-16 88.2 82 56.1
Cpa.g.sc10.47 Carica papaya HOM05D005238 ORTHO05D006337 7.5e-16 87.8 82 53.7
Duzib268G1788 Durio zibethinus HOM05D005238 ORTHO05D006337 7.5e-16 87.8 83 54.2
Zm00001eb140450 Zea mays HOM05D005238 ORTHO05D006337 7.5e-16 87.8 75 53.3
CARHR017080 Cardamine hirsuta HOM05D005238 ORTHO05D006337 9.8e-16 87.4 82 56.1
Ciclev10020284m.g Citrus clementina HOM05D005238 ORTHO05D006337 9.8e-16 87.4 82 61.0
Hma1.2p1_0334F.1_g128770 Hydrangea macrophylla HOM05D005238 ORTHO05D006337 9.8e-16 87.4 82 54.9
PSO017G0328 Papaver somniferum HOM05D005238 ORTHO05D006337 1.3e-15 87.0 82 53.7
PSO170G0319 Papaver somniferum HOM05D005238 ORTHO05D006337 1.3e-15 87.0 82 53.7
FvH4_3g15770 Fragaria vesca HOM05D005238 ORTHO05D006337 1.7e-15 86.7 79 57.0
FAN11G0128 Fragaria x ananassa HOM05D006308 ORTHO05D007820 1.7e-15 86.7 79 57.0
FAN21G1113 Fragaria x ananassa HOM05D005238 ORTHO05D006337 1.7e-15 86.7 79 57.0
Gohir.A13G153000 Gossypium hirsutum HOM05D005238 ORTHO05D006337 1.7e-15 86.7 82 54.9
Solyc10g005590.4 Solanum lycopersicum HOM05D005238 ORTHO05D006337 1.7e-15 86.7 82 54.9
Sopen10g001560 Solanum pennellii HOM05D005238 ORTHO05D006337 1.7e-15 86.7 82 54.9
Dinv19619 Davidia involucrata HOM05D005238 ORTHO05D006337 2.2e-15 86.3 82 54.9
Zm00001eb362580 Zea mays HOM05D005238 ORTHO05D006337 2.2e-15 86.3 75 54.7
Carub.0001s1636 Capsella rubella HOM05D005238 ORTHO05D006337 2.8e-15 85.9 82 56.1
A06p12590 Brassica napus HOM05D005238 ORTHO05D006337 3.7e-15 85.5 77 58.4
C05p14890 Brassica napus HOM05D005238 ORTHO05D006337 3.7e-15 85.5 82 53.7
BraA06t24421Z Brassica rapa HOM05D005238 ORTHO05D006337 3.7e-15 85.5 77 58.4
CiPaw.12G006900 Carya illinoinensis HOM05D005238 ORTHO05D006337 3.7e-15 85.5 82 53.7
Gorai.002G036200 Gossypium raimondii HOM05D005238 ORTHO05D006337 3.7e-15 85.5 70 64.3
RcHm_v2.0_Chr5g0026571 Rosa chinensis HOM05D005238 ORTHO05D006337 3.7e-15 85.5 79 55.7
Sp1g14750 Schrenkiella parvula HOM05D005238 ORTHO05D006337 3.7e-15 85.5 82 53.7
BolC5t30204H Brassica oleracea HOM05D005238 ORTHO05D006337 4.9e-15 85.1 82 53.7
TPR.G9757 Trifolium pratense HOM05D005238 ORTHO05D006337 4.9e-15 85.1 79 53.2
BcaB03g13039 Brassica carinata HOM05D000001 ORTHO05D000003 6.3e-15 84.7 82 53.7
A08p31340 Brassica napus HOM05D000001 ORTHO05D000003 6.3e-15 84.7 82 53.7
FAN25G0513 Fragaria x ananassa HOM05D006308 ORTHO05D007820 6.3e-15 84.7 79 55.7
AL1G28770 Arabidopsis lyrata HOM05D005238 ORTHO05D006337 1.1e-14 84.0 82 54.9
BcaC07g38806 Brassica carinata HOM05D005238 ORTHO05D006337 1.1e-14 84.0 82 53.7
BraA08t35057Z Brassica rapa HOM05D000001 ORTHO05D000003 1.1e-14 84.0 81 54.3
CANSAT80G2747 Cannabis sativa HOM05D005238 ORTHO05D006337 1.4e-14 83.6 80 56.2
BcaC05g25524 Brassica carinata HOM05D005238 ORTHO05D006337 1.8e-14 83.2 81 53.1
Oeu003828.2 Olea europaea HOM05D005238 ORTHO05D006337 2.4e-14 82.8 75 54.7
Os01g0959000 Oryza sativa ssp. japonica HOM05D005238 ORTHO05D006337 2.4e-14 82.8 74 54.1
AT1G16610 Arabidopsis thaliana HOM05D005238 ORTHO05D006337 3.1e-14 82.4 83 56.6
C08p17490 Brassica napus HOM05D005238 ORTHO05D006337 3.1e-14 82.4 80 55.0
BolC8t49374H Brassica oleracea HOM05D005238 ORTHO05D006337 3.1e-14 82.4 80 55.0
FAN16G2086 Fragaria x ananassa HOM05D005238 ORTHO05D006337 3.1e-14 82.4 79 54.4
Lalb_Chr20g0108761 Lupinus albus HOM05D005238 ORTHO05D006337 3.1e-14 82.4 82 52.4
Thecc.07G152800 Theobroma cacao HOM05D005238 ORTHO05D006337 3.1e-14 82.4 82 56.1
Peaxi162Scf00018g00105 Petunia axillaris HOM05D005238 ORTHO05D006337 5.4e-14 81.6 81 50.6
Lalb_Chr25g0284971 Lupinus albus HOM05D005238 ORTHO05D006337 7.0e-14 81.3 75 56.0
Haze_24974 Corylus avellana HOM05D005238 ORTHO05D006337 9.2e-14 80.9 82 51.2
Lj8A188G51 Lonicera japonica HOM05D005238 ORTHO05D006337 9.2e-14 80.9 82 51.2
Nitab4.5_0008429g0030 Nicotiana tabacum HOM05D005238 ORTHO05D006337 1.6e-13 80.1 82 50.0
Aqoxy6G00105 Aquilegia oxysepala HOM05D005238 ORTHO05D006337 2.0e-13 79.7 82 52.4
Migut.M01557 Erythranthe guttata HOM05D005238 ORTHO05D006337 2.0e-13 79.7 77 55.8
HanXRQChr03g0071621 Helianthus annuus HOM05D005238 ORTHO05D006337 2.7e-13 79.3 79 54.4
Oeu052006.1 Olea europaea HOM05D005238 ORTHO05D006337 3.5e-13 79.0 75 53.3
ClCG11G016430 Citrullus lanatus HOM05D005238 ORTHO05D006337 4.5e-13 78.6 62 59.7
CsaV3_4G031880 Cucumis sativus L. HOM05D005238 ORTHO05D006337 4.5e-13 78.6 62 59.7
Gohir.A01G039100 Gossypium hirsutum HOM05D005238 ORTHO05D006337 5.9e-13 78.2 48 77.1
Lsat_1_v5_gn_7_65541 Lactuca sativa HOM05D005238 ORTHO05D006337 5.9e-13 78.2 80 55.0
SEGI_03141 Sequoiadendron giganteum HOM05D005238 ORTHO05D006337 5.9e-13 78.2 60 65.0
Aa31LG7G1130 Aethionema arabicum HOM05D005238 ORTHO05D006337 7.8e-13 77.8 61 62.3
AUR62043127 Chenopodium quinoa HOM05D005238 ORTHO05D006337 7.8e-13 77.8 80 57.5
SGA_v2.0_scaffold186G40218 Striga asiatica HOM05D005238 ORTHO05D006337 1.0e-12 77.4 82 52.4
THA.LOC104813616 Tarenaya hassleriana HOM05D005238 ORTHO05D006337 1.7e-12 76.6 81 51.9
AUR62039165 Chenopodium quinoa HOM05D005238 ORTHO05D006337 2.3e-12 76.3 80 56.2
EL10Ac2g03318 Beta vulgaris HOM05D005238 ORTHO05D006337 2.9e-12 75.9 79 50.6
SalBow8G4928 Salvia bowleyana HOM05D005238 ORTHO05D006337 2.9e-12 75.9 61 60.7
Cfa002698 Carpinus fangiana HOM05D005238 ORTHO05D006337 3.8e-12 75.5 82 48.8
Os05g0105900 Oryza sativa ssp. japonica HOM05D005238 ORTHO05D006337 5.0e-12 75.1 75 50.7
unitig_748.g7636 Utricularia gibba HOM05D005238 ORTHO05D006337 5.0e-12 75.1 61 63.9
Mapoly0011s0143 Marchantia polymorpha HOM05D005238 ORTHO05D006337 6.6e-12 74.7 82 52.4
PGR031G1019 Punica granatum HOM05D005238 ORTHO05D006337 6.6e-12 74.7 48 75.0
HPP92_011420 Vanilla planifolia HOM05D005238 ORTHO05D006337 1.5e-11 73.6 61 55.7
Actinidia07350 Actinidia chinensis HOM05D005238 ORTHO05D006337 1.9e-11 73.2 60 61.7
ECA240G2789 Erigeron canadensis HOM05D005238 ORTHO05D006337 1.9e-11 73.2 61 59.0
MSTRG.7059 Avicennia marina HOM05D005238 ORTHO05D006337 2.5e-11 72.8 61 59.0
DCAR_013738 Daucus carota HOM05D005238 ORTHO05D006337 2.5e-11 72.8 82 48.8
Sed0003933 Sechium edule HOM05D005238 ORTHO05D006337 2.5e-11 72.8 54 63.0
C08p44400 Brassica napus HOM05D005238 ORTHO05D006337 3.3e-11 72.4 84 46.4
Pp3c8_3970 Physcomitrium patens HOM05D005238 ORTHO05D006337 5.6e-11 71.6 52 65.4
Thhalv10007778m.g Eutrema salsugineum HOM05D005238 ORTHO05D006337 7.3e-11 71.2 48 70.8
DCAR_016821 Daucus carota HOM05D005238 ORTHO05D006337 1.2e-10 70.5 76 50.0
Cc05_g16060 Coffea canephora HOM05D005238 ORTHO05D006337 2.8e-10 69.3 82 48.8
MELO3C026965.2 Cucumis melo HOM05D005238 ORTHO05D006337 4.7e-10 68.6 82 48.8
A09p60810 Brassica napus HOM05D005238 ORTHO05D006337 1.0e-09 67.4 84 46.4
BraA09t41454Z Brassica rapa HOM05D005238 ORTHO05D006337 1.0e-09 67.4 84 42.9
Pp3c3_28550 Physcomitrium patens HOM05D005238 ORTHO05D006337 1.4e-09 67.0 81 49.4
Sc06g0001540 Simmondsia chinensis HOM05D005238 ORTHO05D006337 1.4e-09 67.0 110 39.1
BolC8t51981H Brassica oleracea HOM05D005238 ORTHO05D006337 3.1e-09 65.9 84 42.9
Pp3c12_22790 Physcomitrium patens HOM05D005238 ORTHO05D006337 4.0e-09 65.5 63 52.4
SEGI_37868 Sequoiadendron giganteum HOM05D005238 ORTHO05D006337 5.2e-09 65.1 75 45.3
CAN.G24.9 Capsicum annuum HOM05D005238 ORTHO05D006337 6.8e-09 64.7 58 58.6
BcaB07g32526 Brassica carinata HOM05D002708 ORTHO05D006337 8.9e-09 64.3 79 43.0
Aa31LG4G1900 Aethionema arabicum HOM05D005238 ORTHO05D006337 7.5e-08 61.2 72 50.0
SMO271G0048 Selaginella moellendorffii HOM05D005238 ORTHO05D006337 7.0e-06 54.7 65 44.6
Cre03.g164950 Chlamydomonas reinhardtii HOM05D005238 ORTHO05D006337 9.2e-06 54.3 46 54.3
SMO364G0823 Selaginella moellendorffii HOM05D005238 ORTHO05D006337 9.2e-06 54.3 65 43.1


User provided reference genes

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