Gene: Thecc.07G152800

General Information

Structural Information

  • Species Theobroma cacao
  • Gene Identifier Thecc.07G152800
  • Transcript Identifier Thecc.07G152800.1
  • Gene Type Coding gene
  • Location Chromosome_7 : 11256096-11263542 : negative

Gene Family Information

  • ID HOM05D005238
  • #Genes/#Species 144/94
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Thecc.07G152800.v2.1
  • pacid 41995857
  • ancestorIdentifier Thecc1EG032429.CGDv1.1
  • ancestorIdentifier Thecc1EG032429t1.CGDv1.1

Descriptions

  • Description Arginine/serine-rich 45
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000381
ISO
PLAZA Integrative Orthologyregulation of alternative mRNA splicing, via spliceosome AT1G16610
GO:0010182
ISO
PLAZA Integrative Orthologysugar mediated signaling pathway AT1G16610
GO:0000398
ISO
PLAZA Integrative OrthologymRNA splicing, via spliceosome AT1G16610

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
InterPronucleic acid binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G16610

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016607
ISO
PLAZA Integrative Orthologynuclear speck AT1G16610
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT1G16610
GO:0005654
ISO
PLAZA Integrative Orthologynucleoplasm AT1G16610

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000504 RNA recognition motif domain
IPR034201 RNPS1, RNA recognition motif
IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 RNA-binding domain superfamily
Mapman id Description
17.3.1.2.1 Protein biosynthesis.mRNA quality control.Exon Junction complex (EJC).peripheral components.component RNPS1